Gene: Cpa.g.sc43.154

General Information

Structural Information

  • Species Carica papaya
  • Gene Identifier Cpa.g.sc43.154
  • Transcript Identifier Cpa.t.sc43.154
  • Gene Type Coding gene
  • Location supercontig_43 : 1862804-1866978 : negative

Gene Family Information

  • ID HOM05D004970
  • #Genes/#Species 150/87
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 16419967
  • tid PAC:16419967

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0071482
ISO
PLAZA Integrative Orthologycellular response to light stimulus AT1G64860
GO:2001141
ISO
PLAZA Integrative Orthologyregulation of RNA biosynthetic process AT1G64860
GO:0071461
ISO
PLAZA Integrative Orthologycellular response to redox state AT1G64860
GO:0080005
ISO
PLAZA Integrative Orthologyphotosystem stoichiometry adjustment AT1G64860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0016987
ISO
PLAZA Integrative Orthologysigma factor activity AT1G64860
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G64860

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G64860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007630 RNA polymerase sigma-70 region 4
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR000943 RNA polymerase sigma-70
IPR013324 RNA polymerase sigma factor, region 3/4-like
Mapman id Description
15.6.2.1 RNA biosynthesis.organelle machinery.transcriptional regulation.basal transcription factor (Sigma)