Gene: FAN01G0343

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN01G0343
  • Transcript Identifier FAN01G0343.1
  • Gene Type Coding gene
  • Location Fvb7-4 : 34238-37262 : negative

Gene Family Information

  • ID HOM05D004970
  • #Genes/#Species 150/87
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb7-4-augustus-gene-0.47.v1.0.a1
  • pacid 50541565

Descriptions

  • Description PF04539//PF04545 - Sigma-70 region 3 (Sigma70_r3) // Sigma-70, region 4 (Sigma70_r4)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0071482
ISO
PLAZA Integrative Orthologycellular response to light stimulus AT1G64860
GO:2001141
ISO
PLAZA Integrative Orthologyregulation of RNA biosynthetic process AT1G64860
GO:0071461
ISO
PLAZA Integrative Orthologycellular response to redox state AT1G64860
GO:0080005
ISO
PLAZA Integrative Orthologyphotosystem stoichiometry adjustment AT1G64860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0016987
ISO
PLAZA Integrative Orthologysigma factor activity AT1G64860
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G64860

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G64860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR007630 RNA polymerase sigma-70 region 4
IPR013324 RNA polymerase sigma factor, region 3/4-like
IPR007624 RNA polymerase sigma-70 region 3
IPR013325 RNA polymerase sigma factor, region 2
Mapman id Description
15.6.2.1 RNA biosynthesis.organelle machinery.transcriptional regulation.basal transcription factor (Sigma)