Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3757 Ceratophyllum demersum HOM05D005180 ORTHO05D006136 4.8e-110 401.4 229 100.0
vmacro07270 Vaccinium macrocarpon HOM05D005180 ORTHO05D006136 2.5e-87 325.9 227 74.0
CDE11G0176 Ceratophyllum demersum HOM05D005180 ORTHO05D006136 2.2e-86 322.8 178 94.9
PSO063G1868 Papaver somniferum HOM05D005180 ORTHO05D006136 5.3e-85 318.2 231 73.6
Dinv35897 Davidia involucrata HOM05D005180 ORTHO05D006136 5.9e-84 314.7 227 75.8
Aqoxy5G01637 Aquilegia oxysepala HOM05D005180 ORTHO05D006136 7.7e-84 314.3 227 72.2
TAR374G0042 Trochodendron aralioides HOM05D005180 ORTHO05D006136 8.5e-83 310.8 227 78.0
Rhsim04G0005300 Rhododendron simsii HOM05D005180 ORTHO05D006136 1.4e-82 310.1 192 81.8
CSS0011166 Camellia sinensis var. sinensis HOM05D005180 ORTHO05D006136 1.9e-82 309.7 227 77.1
Actinidia24488 Actinidia chinensis HOM05D005180 ORTHO05D006136 5.5e-82 308.1 227 76.7
Hma1.2p1_1711F.1_g298680 Hydrangea macrophylla HOM05D005180 ORTHO05D006136 7.2e-82 307.8 191 80.6
Nitab4.5_0000428g0030 Nicotiana tabacum HOM05D005180 ORTHO05D006136 9.4e-82 307.4 228 70.2
Rhsim13G0203300 Rhododendron simsii HOM05D005180 ORTHO05D006136 9.4e-82 307.4 227 76.7
Actinidia07010 Actinidia chinensis HOM05D005180 ORTHO05D006136 1.2e-81 307.0 227 76.2
HanXRQChr01g0020751 Helianthus annuus HOM05D005180 ORTHO05D006136 2.1e-81 306.2 228 69.7
Potri.013G080200 Populus trichocarpa HOM05D005180 ORTHO05D006136 2.1e-81 306.2 227 70.0
Sopen11g029830 Solanum pennellii HOM05D005180 ORTHO05D006136 2.1e-81 306.2 228 72.8
CAN.G714.6 Capsicum annuum HOM05D005180 ORTHO05D006136 2.7e-81 305.8 228 72.4
Sabra13G0072900 Salix brachista HOM05D005180 ORTHO05D006136 2.7e-81 305.8 227 70.0
Ciclev10021949m.g Citrus clementina HOM05D005180 ORTHO05D006136 3.6e-81 305.4 224 77.2
HPP92_017562 Vanilla planifolia HOM05D005180 ORTHO05D006136 3.6e-81 305.4 228 75.9
Nn8g41146 Nelumbo nucifera HOM05D005180 ORTHO05D006136 4.7e-81 305.1 192 80.7
GSVIVG01037378001 Vitis vinifera HOM05D005180 ORTHO05D006136 6.1e-81 304.7 227 74.4
CAN.G1085.4 Capsicum annuum HOM05D005180 ORTHO05D006136 7.9e-81 304.3 227 69.6
Aqoxy3G02241 Aquilegia oxysepala HOM05D005180 ORTHO05D006136 1.0e-80 303.9 227 76.7
Peaxi162Scf00050g01910 Petunia axillaris HOM05D005180 ORTHO05D006136 1.4e-80 303.5 196 78.1
Os08g0160000 Oryza sativa ssp. japonica HOM05D005180 ORTHO05D006136 1.8e-80 303.1 228 75.4
DCAR_016143 Daucus carota HOM05D005180 ORTHO05D006136 2.3e-80 302.8 227 76.2
Lalb_Chr20g0121321 Lupinus albus HOM05D005180 ORTHO05D006136 5.1e-80 301.6 231 68.0
Nitab4.5_0002915g0060 Nicotiana tabacum HOM05D005180 ORTHO05D006136 5.1e-80 301.6 228 72.4
PSO782G2417 Papaver somniferum HOM05D005180 ORTHO05D006136 6.7e-80 301.2 227 76.7
PGSC0003DMG400022705 Solanum tuberosum HOM05D005180 ORTHO05D006136 8.8e-80 300.8 226 72.1
SGA_v2.0_scaffold29G12131 Striga asiatica HOM05D005180 ORTHO05D006136 1.5e-79 300.1 228 74.6
Sed0003176 Sechium edule HOM05D005180 ORTHO05D006136 2.6e-79 299.3 227 69.2
CsaV3_2G036420 Cucumis sativus L. HOM05D005180 ORTHO05D006136 3.3e-79 298.9 227 69.6
Migut.D00701 Erythranthe guttata HOM05D005180 ORTHO05D006136 3.3e-79 298.9 227 74.9
Prupe.8G027400 Prunus persica HOM05D005180 ORTHO05D006136 4.4e-79 298.5 227 70.5
TPR.G11750 Trifolium pratense HOM05D005180 ORTHO05D006136 4.4e-79 298.5 229 72.1
unitig_62.g23868 Utricularia gibba HOM05D005180 ORTHO05D006136 4.4e-79 298.5 227 71.4
unitig_64.g29770 Utricularia gibba HOM05D005180 ORTHO05D006136 4.4e-79 298.5 227 71.4
VMungo0540G0753 Vigna mungo HOM05D005180 ORTHO05D006136 4.4e-79 298.5 229 73.4
MELO3C021887.2 Cucumis melo HOM05D005180 ORTHO05D006136 5.7e-79 298.1 227 69.2
Solyc01g008990.4 Solanum lycopersicum HOM05D005180 ORTHO05D006136 5.7e-79 298.1 226 71.2
Cc01_g07100 Coffea canephora HOM05D005180 ORTHO05D006136 7.4e-79 297.7 227 74.0
MSTRG.18479 Avicennia marina HOM05D005180 ORTHO05D006136 9.7e-79 297.4 227 72.7
Gorai.003G054000 Gossypium raimondii HOM05D005180 ORTHO05D006136 9.7e-79 297.4 227 72.7
RcHm_v2.0_Chr6g0275831 Rosa chinensis HOM05D005180 ORTHO05D006136 9.7e-79 297.4 199 76.4
Lsat_1_v5_gn_1_93761 Lactuca sativa HOM05D005180 ORTHO05D006136 1.3e-78 297.0 198 75.3
MD10G1023900 Malus domestica HOM05D005180 ORTHO05D006136 1.3e-78 297.0 199 76.4
Sopen01g004480 Solanum pennellii HOM05D005180 ORTHO05D006136 2.2e-78 296.2 226 71.2
ClCG09G016930 Citrullus lanatus HOM05D005180 ORTHO05D006136 2.8e-78 295.8 227 72.7
Manes.08G064700 Manihot esculenta HOM05D005180 ORTHO05D006136 4.8e-78 295.0 227 73.1
Sc24g0001580 Simmondsia chinensis HOM05D005180 ORTHO05D006136 4.8e-78 295.0 227 67.4
SalBow6G2568 Salvia bowleyana HOM05D005180 ORTHO05D006136 8.2e-78 294.3 227 74.0
Ca_00419_v3 Cicer arietinum L. HOM05D005180 ORTHO05D006136 1.1e-77 293.9 229 71.6
Haze_00396 Corylus avellana HOM05D005180 ORTHO05D006136 1.1e-77 293.9 227 74.0
Phvul.006G178100 Phaseolus vulgaris HOM05D005180 ORTHO05D006136 1.1e-77 293.9 229 72.5
PGSC0003DMG400027389 Solanum tuberosum HOM05D005180 ORTHO05D006136 1.1e-77 293.9 192 76.6
Gohir.D03G052000 Gossypium hirsutum HOM05D005180 ORTHO05D006136 1.4e-77 293.5 227 71.8
MBI19_g22663_MAGBIO Magnolia biondii HOM05D005180 ORTHO05D006136 2.4e-77 292.7 227 73.6
Zm00001eb001480 Zea mays HOM05D005180 ORTHO05D006136 3.1e-77 292.4 197 76.1
FAN27G2246 Fragaria x ananassa HOM05D005180 ORTHO05D006136 4.1e-77 292.0 200 76.0
Glyma.15G080600 Glycine max HOM05D005180 ORTHO05D006136 4.1e-77 292.0 230 71.7
Psat1g199720 Pisum sativum HOM05D005180 ORTHO05D006136 4.1e-77 292.0 229 72.5
ATR0829G067 Amborella trichopoda HOM05D005180 ORTHO05D006136 5.3e-77 291.6 191 77.5
CiPaw.06G034400 Carya illinoinensis HOM05D005180 ORTHO05D006136 5.3e-77 291.6 227 74.4
FAN20G0932 Fragaria x ananassa HOM05D005180 ORTHO05D006136 7.0e-77 291.2 200 76.0
QL09p023193 Quercus lobata HOM05D005180 ORTHO05D006136 7.0e-77 291.2 227 73.1
FvH4_2g13990 Fragaria vesca HOM05D005180 ORTHO05D006136 9.1e-77 290.8 200 76.0
PGR004G2116 Punica granatum HOM05D005180 ORTHO05D006136 9.1e-77 290.8 199 74.9
Thecc.05G216000 Theobroma cacao HOM05D005180 ORTHO05D006136 9.1e-77 290.8 227 73.6
Duzib106G0272 Durio zibethinus HOM05D005180 ORTHO05D006136 1.2e-76 290.4 227 73.1
ECA240G0118 Erigeron canadensis HOM05D005180 ORTHO05D006136 1.2e-76 290.4 224 66.5
Medtr2g015520 Medicago truncatula HOM05D005180 ORTHO05D006136 2.0e-76 289.7 229 72.1
Cfa016051 Carpinus fangiana HOM05D005180 ORTHO05D006136 2.6e-76 289.3 227 73.6
FAN24G0415 Fragaria x ananassa HOM05D005180 ORTHO05D006136 3.5e-76 288.9 200 75.5
Eucgr.D02531 Eucalyptus grandis HOM05D005180 ORTHO05D006136 4.5e-76 288.5 195 73.8
COL.COLO4_15239 Corchorus olitorius HOM05D005180 ORTHO05D006136 7.7e-76 287.7 227 72.2
Gohir.A02G141500 Gossypium hirsutum HOM05D005180 ORTHO05D006136 7.7e-76 287.7 227 72.7
Nitab4.5_0002161g0010 Nicotiana tabacum HOM05D005180 ORTHO05D006136 7.7e-76 287.7 227 69.6
Nitab4.5_0002567g0080 Nicotiana tabacum HOM05D005180 ORTHO05D006136 7.7e-76 287.7 198 72.7
Oeu032043.1 Olea europaea HOM05D005180 ORTHO05D006136 7.7e-76 287.7 192 75.5
Zm00001eb403820 Zea mays HOM05D005180 ORTHO05D006136 1.0e-75 287.3 194 76.3
FAN15G0398 Fragaria x ananassa HOM05D005180 ORTHO05D006136 1.7e-75 286.6 200 75.0
Duzib177G0947 Durio zibethinus HOM05D005180 ORTHO05D006136 8.5e-75 284.3 227 72.2
Glyma.13G232100 Glycine max HOM05D005180 ORTHO05D006136 1.4e-74 283.5 228 71.1
Atru.chr5.727 Acer truncatum HOM05D005180 ORTHO05D006136 3.2e-74 282.3 185 78.9
Lj6g0006583 Lotus japonicus HOM05D005180 ORTHO05D006136 7.2e-74 281.2 232 70.7
arahy.Tifrunner.gnm1.ann1.T3IE7U Arachis hypogaea HOM05D005180 ORTHO05D006136 1.2e-73 280.4 230 68.3
Os05g0569800 Oryza sativa ssp. japonica HOM05D005180 ORTHO05D006136 1.2e-73 280.4 229 68.1
arahy.Tifrunner.gnm1.ann1.F0IXSY Arachis hypogaea HOM05D005180 ORTHO05D006136 2.7e-73 279.3 230 69.6
arahy.Tifrunner.gnm1.ann1.ZTB6Z9 Arachis hypogaea HOM05D005180 ORTHO05D006136 2.7e-73 279.3 230 69.6
Lj2P827T12 Lonicera japonica HOM05D005180 ORTHO05D006136 2.7e-73 279.3 185 77.8
EL10Ac6g14989 Beta vulgaris HOM05D005180 ORTHO05D006136 3.6e-73 278.9 227 70.5
Oeu025945.2 Olea europaea HOM05D005180 ORTHO05D006136 3.6e-73 278.9 182 76.9
TWI60G1377 Tripterygium wilfordii HOM05D005180 ORTHO05D006136 3.6e-73 278.9 190 74.2
arahy.Tifrunner.gnm1.ann1.ZY7ZXH Arachis hypogaea HOM05D005180 ORTHO05D006136 6.1e-73 278.1 230 68.7
Mapoly0076s0002 Marchantia polymorpha HOM05D005180 ORTHO05D006136 8.0e-73 277.7 227 64.3
CANSAT56G1354 Cannabis sativa HOM05D005180 ORTHO05D006136 1.4e-72 276.9 225 69.8
TWI32G1096 Tripterygium wilfordii HOM05D005180 ORTHO05D006136 1.4e-72 276.9 192 72.9
AL6G27810 Arabidopsis lyrata HOM05D005180 ORTHO05D006136 1.8e-72 276.6 199 71.9
CARHR196370 Cardamine hirsuta HOM05D005180 ORTHO05D006136 1.8e-72 276.6 227 63.4
Thhalv10021437m.g Eutrema salsugineum HOM05D005180 ORTHO05D006136 2.3e-72 276.2 225 64.0
Carub.0003s0208 Capsella rubella HOM05D005180 ORTHO05D006136 3.9e-72 275.4 224 64.3
AUR62005241 Chenopodium quinoa HOM05D005180 ORTHO05D006136 3.9e-72 275.4 227 63.0
Dinv16767 Davidia involucrata HOM05D005180 ORTHO05D006136 6.7e-72 274.6 214 72.0
AL3G12410 Arabidopsis lyrata HOM05D005180 ORTHO05D006136 8.8e-72 274.2 224 63.8
AT5G16790 Arabidopsis thaliana HOM05D005180 ORTHO05D006136 1.5e-71 273.5 199 70.9
AagrBONN_evm.TU.Sc2ySwM_344.1992 Anthoceros agrestis HOM05D005180 ORTHO05D006136 2.6e-71 272.7 197 71.1
Sp3g02010 Schrenkiella parvula HOM05D005180 ORTHO05D006136 3.3e-71 272.3 225 63.6
AT3G02950 Arabidopsis thaliana HOM05D005180 ORTHO05D006136 5.7e-71 271.6 224 62.9
AUR62000723 Chenopodium quinoa HOM05D005180 ORTHO05D006136 9.7e-71 270.8 227 63.4
CARHR076980 Cardamine hirsuta HOM05D005180 ORTHO05D006136 2.2e-70 269.6 224 63.4
SMO356G0075 Selaginella moellendorffii HOM05D005180 ORTHO05D006136 2.2e-70 269.6 227 60.8
Aa31LG5G13450 Aethionema arabicum HOM05D005180 ORTHO05D006136 2.8e-70 269.2 194 70.1
C05p63850 Brassica napus HOM05D005180 ORTHO05D006136 1.4e-69 266.9 195 69.2
BolC5t35050H Brassica oleracea HOM05D005180 ORTHO05D006136 1.4e-69 266.9 195 69.2
Potri.013G082900 Populus trichocarpa HOM05D005180 ORTHO05D006136 2.4e-69 266.2 182 74.7
Hund05844 Selenicereus undatus HOM05D005180 ORTHO05D006136 2.4e-69 266.2 227 68.3
THA.LOC104820896 Tarenaya hassleriana HOM05D005180 ORTHO05D006136 4.1e-69 265.4 191 71.2
A05p44170 Brassica napus HOM05D005180 ORTHO05D006136 7.0e-69 264.6 195 68.7
BraSC90t46693Z Brassica rapa HOM05D005180 ORTHO05D006136 7.0e-69 264.6 195 68.7
Ah.04g161260 Amaranthus hybridus HOM05D005180 ORTHO05D006136 2.2e-67 259.6 199 65.8
Pp3c15_21620 Physcomitrium patens HOM05D005180 ORTHO05D006136 5.5e-66 255.0 227 59.9
Cpa.g.sc14.58 Carica papaya HOM05D005180 ORTHO05D006136 6.3e-62 241.5 169 72.8
SEGI_37847 Sequoiadendron giganteum HOM05D005180 ORTHO05D006136 8.0e-57 224.6 191 63.9
Carub.0006s1501 Capsella rubella HOM05D005180 ORTHO05D006136 2.3e-51 206.5 142 73.2
Prupe.8G026900 Prunus persica HOM05D005180 ORTHO05D006136 5.5e-50 201.8 199 58.8
SHI53994 Sapria himalayana HOM05D005180 ORTHO05D006136 4.0e-48 195.7 198 56.1
MD05G1022700 Malus domestica HOM05D005180 ORTHO05D006136 3.4e-47 192.6 169 63.9
MD00G1125800 Malus domestica HOM05D005180 ORTHO05D006136 3.1e-40 169.5 119 71.4
CBR_g51237 Chara braunii HOM05D005180 ORTHO05D006136 2.0e-39 166.8 176 52.3
CBR_g4125 Chara braunii HOM05D005180 ORTHO05D006136 9.2e-37 157.9 173 50.9
Prupe.8G027200 Prunus persica HOM05D005180 ORTHO05D006136 1.0e-35 154.5 97 75.3
MD05G1023000 Malus domestica HOM05D005180 ORTHO05D006136 3.6e-33 146.0 199 47.7
Glyma.07G081200 Glycine max HOM05D005180 ORTHO05D006136 7.1e-29 131.7 91 68.1
MCO09G003 Micromonas commoda HOM05D005180 ORTHO05D006136 7.3e-26 121.7 188 38.8
SHI47254 Sapria himalayana HOM05D005180 ORTHO05D006136 1.6e-25 120.6 99 63.6
Prupe.8G026600 Prunus persica HOM05D005180 ORTHO05D006136 4.7e-25 119.0 87 65.5
Cre03.g182350 Chlamydomonas reinhardtii HOM05D005180 ORTHO05D006136 1.0e-19 101.3 190 33.2
Solyc11g072180.3 Solanum lycopersicum HOM05D005180 ORTHO05D006136 1.3e-19 100.9 90 70.0
FvH4_4g00100 Fragaria vesca HOM05D005180 ORTHO05D006136 6.2e-17 92.0 61 80.3
PRCOL_00001653 Prasinoderma coloniale HOM05D005180 ORTHO05D006136 3.9e-11 72.8 192 27.1
SHI47253 Sapria himalayana HOM05D005180 ORTHO05D006136 5.6e-10 68.9 39 82.1
FAN23G1155 Fragaria x ananassa HOM05D001255 ORTHO05D011996 1.3e-06 57.8 54 66.7


User provided reference genes

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