Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3748 Ceratophyllum demersum HOM05D003906 ORTHO05D004776 3.0e-262 907.9 436 100.0
CDE08G1205 Ceratophyllum demersum HOM05D003906 ORTHO05D004776 8.0e-223 776.9 454 85.7
MBI06_g32171_MAGBIO Magnolia biondii HOM05D003906 ORTHO05D004776 1.6e-143 513.5 435 60.2
TAR628G0992 Trochodendron aralioides HOM05D003906 ORTHO05D004776 1.5e-141 506.9 459 56.0
TWI59G1118 Tripterygium wilfordii HOM05D003906 ORTHO05D004776 6.7e-137 491.5 440 55.7
FvH4_5g32270 Fragaria vesca HOM05D003906 ORTHO05D004776 2.5e-136 489.6 449 56.3
PSO170G2127 Papaver somniferum HOM05D003906 ORTHO05D004776 4.3e-136 488.8 452 54.4
Ciclev10001078m.g Citrus clementina HOM05D003906 ORTHO05D004776 5.7e-136 488.4 422 57.3
Prupe.1G552200 Prunus persica HOM05D003906 ORTHO05D004776 1.6e-135 486.9 447 56.6
PSO017G0948 Papaver somniferum HOM05D003906 ORTHO05D004776 8.2e-135 484.6 452 54.0
ATR1136G046 Amborella trichopoda HOM05D003906 ORTHO05D004776 1.8e-134 483.4 440 55.9
Aqoxy5G02955 Aquilegia oxysepala HOM05D003906 ORTHO05D004776 2.4e-134 483.0 428 57.0
CsaV3_5G040450 Cucumis sativus L. HOM05D003906 ORTHO05D004776 1.2e-133 480.7 447 54.8
MELO3C022219.2 Cucumis melo HOM05D003906 ORTHO05D004776 1.0e-132 477.6 447 54.8
PGR042G0234 Punica granatum HOM05D003906 ORTHO05D004776 1.0e-132 477.6 447 55.0
Atru.chr2.1825 Acer truncatum HOM05D003906 ORTHO05D004776 1.7e-132 476.9 432 56.0
THA.LOC104816477 Tarenaya hassleriana HOM05D003906 ORTHO05D004776 2.2e-132 476.5 443 54.9
QL02p025746 Quercus lobata HOM05D003906 ORTHO05D004776 3.8e-132 475.7 436 55.3
Thecc.08G187700 Theobroma cacao HOM05D003906 ORTHO05D004776 4.9e-132 475.3 432 56.0
FAN18G2269 Fragaria x ananassa HOM05D003906 ORTHO05D004776 1.1e-131 474.2 479 52.8
Manes.02G196200 Manihot esculenta HOM05D003906 ORTHO05D004776 1.4e-131 473.8 425 56.2
arahy.Tifrunner.gnm1.ann1.NDRV14 Arachis hypogaea HOM05D003906 ORTHO05D004776 3.2e-131 472.6 422 56.2
Hund16785 Selenicereus undatus HOM05D003906 ORTHO05D004776 4.2e-131 472.2 427 55.5
Gorai.009G264700 Gossypium raimondii HOM05D003906 ORTHO05D004776 2.1e-130 469.9 453 53.2
Gohir.A05G251300 Gossypium hirsutum HOM05D003906 ORTHO05D004776 3.5e-130 469.2 450 53.6
Medtr4g032800 Medicago truncatula HOM05D003906 ORTHO05D004776 3.5e-130 469.2 446 53.6
Eucgr.F02579 Eucalyptus grandis HOM05D003906 ORTHO05D004776 6.1e-130 468.4 447 53.2
CiPaw.08G001800 Carya illinoinensis HOM05D003906 ORTHO05D004776 1.3e-129 467.2 443 53.7
Gohir.D05G252500 Gossypium hirsutum HOM05D003906 ORTHO05D004776 3.9e-129 465.7 450 53.8
Gohir.A09G115500 Gossypium hirsutum HOM05D003906 ORTHO05D004776 5.1e-129 465.3 425 55.5
TPR.G34173 Trifolium pratense HOM05D003906 ORTHO05D004776 6.7e-129 464.9 415 57.1
Aa31LG6G8750 Aethionema arabicum HOM05D003906 ORTHO05D004776 1.1e-128 464.2 448 52.9
Actinidia23018 Actinidia chinensis HOM05D003906 ORTHO05D004776 1.5e-128 463.8 427 54.1
CSS0022245 Camellia sinensis var. sinensis HOM05D003906 ORTHO05D004776 1.9e-128 463.4 427 54.6
CSS0049725 Camellia sinensis var. sinensis HOM05D003906 ORTHO05D004776 2.5e-128 463.0 427 54.6
Manes.18G104100 Manihot esculenta HOM05D003906 ORTHO05D004776 2.5e-128 463.0 426 55.2
Phvul.011G000900 Phaseolus vulgaris HOM05D003906 ORTHO05D004776 2.5e-128 463.0 421 55.6
Sed0011736 Sechium edule HOM05D003906 ORTHO05D004776 2.5e-128 463.0 423 54.8
Dinv41741 Davidia involucrata HOM05D003906 ORTHO05D004776 3.3e-128 462.6 430 56.5
arahy.Tifrunner.gnm1.ann1.AC170Q Arachis hypogaea HOM05D003906 ORTHO05D004776 5.7e-128 461.8 472 50.4
Ca_19699_v3 Cicer arietinum L. HOM05D003906 ORTHO05D004776 5.7e-128 461.8 415 55.9
Duzib177G0129 Durio zibethinus HOM05D003906 ORTHO05D004776 5.7e-128 461.8 446 53.1
VMungo1127G1719 Vigna mungo HOM05D003906 ORTHO05D004776 9.7e-128 461.1 417 54.9
Gohir.D09G112300 Gossypium hirsutum HOM05D003906 ORTHO05D004776 4.8e-127 458.8 423 55.3
Gorai.006G130100 Gossypium raimondii HOM05D003906 ORTHO05D004776 6.3e-127 458.4 423 55.3
Glyma.12G000900 Glycine max HOM05D003906 ORTHO05D004776 8.2e-127 458.0 439 53.1
Glyma.08G238500 Glycine max HOM05D003906 ORTHO05D004776 1.1e-126 457.6 417 55.2
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.8e-126 456.8 451 53.0
FAN04G2445 Fragaria x ananassa HOM05D003906 ORTHO05D004776 5.3e-126 455.3 447 53.5
Dinv04083 Davidia involucrata HOM05D003906 ORTHO05D004776 6.9e-126 454.9 433 54.0
Nitab4.5_0000130g0080 Nicotiana tabacum HOM05D003906 ORTHO05D004776 1.2e-125 454.1 405 55.8
Ah.05g178390 Amaranthus hybridus HOM05D003906 ORTHO05D004776 1.5e-125 453.8 427 53.6
Nitab4.5_0009321g0030 Nicotiana tabacum HOM05D003906 ORTHO05D004776 3.4e-125 452.6 427 53.4
MD15G1410300 Malus domestica HOM05D003906 ORTHO05D004776 2.2e-124 449.9 480 50.4
Lj3g0000257 Lotus japonicus HOM05D003906 ORTHO05D004776 3.8e-124 449.1 439 53.8
AT1G35470 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 1.4e-123 447.2 445 52.1
Rhsim06G0114100 Rhododendron simsii HOM05D003906 ORTHO05D004776 1.4e-123 447.2 485 49.3
Peaxi162Scf00076g00225 Petunia axillaris HOM05D003906 ORTHO05D004776 1.9e-123 446.8 423 53.2
Thhalv10001818m.g Eutrema salsugineum HOM05D003906 ORTHO05D004776 2.5e-123 446.4 441 53.3
Solyc03g033380.3 Solanum lycopersicum HOM05D003906 ORTHO05D004776 2.5e-123 446.4 424 51.9
CAN.G354.51 Capsicum annuum HOM05D003906 ORTHO05D004776 3.2e-123 446.0 424 52.8
Cfa012932 Carpinus fangiana HOM05D003906 ORTHO05D000991 4.2e-123 445.7 411 54.3
Sopen03g006150 Solanum pennellii HOM05D003906 ORTHO05D004776 4.2e-123 445.7 439 50.8
HanXRQChr04g0109631 Helianthus annuus HOM05D003906 ORTHO05D004776 7.2e-123 444.9 427 53.9
Hma1.2p1_0342F.1_g130710 Hydrangea macrophylla HOM05D003906 ORTHO05D004776 3.6e-122 442.6 414 55.1
Cc10_g10260 Coffea canephora HOM05D003906 ORTHO05D004776 4.6e-122 442.2 424 53.3
Sp1g30230 Schrenkiella parvula HOM05D003906 ORTHO05D004776 2.3e-121 439.9 423 53.7
Carub.0001s3308 Capsella rubella HOM05D003906 ORTHO05D004776 6.7e-121 438.3 437 51.9
MD08G1220100 Malus domestica HOM05D003906 ORTHO05D004776 8.8e-121 438.0 422 54.3
Os02g0556600 Oryza sativa ssp. japonica HOM05D003906 ORTHO05D004776 8.8e-121 438.0 425 53.6
Lalb_Chr01g0000071 Lupinus albus HOM05D003906 ORTHO05D004776 1.1e-120 437.6 427 52.2
Haze_21286 Corylus avellana HOM05D003906 ORTHO05D004776 2.0e-120 436.8 476 49.2
HPP92_001193 Vanilla planifolia HOM05D003906 ORTHO05D004776 2.5e-120 436.4 419 53.2
Potri.013G108400 Populus trichocarpa HOM05D003906 ORTHO05D004776 4.3e-120 435.6 443 50.6
C06p11170 Brassica napus HOM05D003906 ORTHO05D004776 5.7e-120 435.3 429 52.7
BraA09t38715Z Brassica rapa HOM05D003906 ORTHO05D004776 5.7e-120 435.3 429 52.7
BcaC08g43739 Brassica carinata HOM05D003906 ORTHO05D004776 7.4e-120 434.9 429 52.7
BolC6t36252H Brassica oleracea HOM05D003906 ORTHO05D004776 7.4e-120 434.9 429 52.7
BcaB07g33091 Brassica carinata HOM05D003906 ORTHO05D004776 9.7e-120 434.5 423 52.0
SalBow7G1596 Salvia bowleyana HOM05D003906 ORTHO05D004776 1.3e-119 434.1 424 53.3
Migut.C01295 Erythranthe guttata HOM05D003906 ORTHO05D004776 3.7e-119 432.6 426 53.8
EL10Ac1g00112 Beta vulgaris HOM05D003906 ORTHO05D004776 6.3e-119 431.8 449 49.7
A09p31780 Brassica napus HOM05D003906 ORTHO05D004776 6.3e-119 431.8 429 52.4
AL1G50340 Arabidopsis lyrata HOM05D003906 ORTHO05D004776 1.1e-118 431.0 477 48.6
BcaB03g13663 Brassica carinata HOM05D003906 ORTHO05D004776 5.3e-118 428.7 425 51.8
Lj4C483G1 Lonicera japonica HOM05D003906 ORTHO05D004776 4.5e-117 425.6 439 52.4
BcaC05g27736 Brassica carinata HOM05D003906 ORTHO05D004776 3.8e-116 422.5 443 50.1
C05p37240 Brassica napus HOM05D003906 ORTHO05D004776 3.8e-116 422.5 443 50.1
Oeu064077.1 Olea europaea HOM05D003906 ORTHO05D004776 8.5e-116 421.4 427 51.3
A05p23780 Brassica napus HOM05D003906 ORTHO05D004776 1.1e-115 421.0 431 51.7
BraA05t21248Z Brassica rapa HOM05D003906 ORTHO05D004776 1.1e-115 421.0 431 51.7
DCAR_001451 Daucus carota HOM05D003906 ORTHO05D004776 2.5e-115 419.9 438 49.5
A03p28530 Brassica napus HOM05D003906 ORTHO05D004776 3.2e-115 419.5 425 51.3
BolC5t32471H Brassica oleracea HOM05D003906 ORTHO05D004776 3.2e-115 419.5 434 51.2
Duzib116G0916 Durio zibethinus HOM05D003906 ORTHO05D004776 3.2e-115 419.5 448 50.4
ECA247G1339 Erigeron canadensis HOM05D003906 ORTHO05D004776 3.2e-115 419.5 429 52.0
SGA_v2.0_scaffold24G10576 Striga asiatica HOM05D003906 ORTHO05D004776 3.2e-115 419.5 462 48.1
AUR62023516 Chenopodium quinoa HOM05D003906 ORTHO05D004776 1.6e-114 417.2 448 49.1
Oeu051791.1 Olea europaea HOM05D003906 ORTHO05D004776 1.6e-114 417.2 432 51.4
Lsat_1_v5_gn_1_12460 Lactuca sativa HOM05D003906 ORTHO05D004776 2.7e-114 416.4 442 51.1
Zm00001eb243840 Zea mays HOM05D003906 ORTHO05D004776 6.1e-114 415.2 424 50.5
GSVIVG01001786001 Vitis vinifera HOM05D003906 ORTHO05D004776 1.0e-113 414.5 386 55.7
Zm00001eb182000 Zea mays HOM05D003906 ORTHO05D004776 3.0e-113 412.9 422 51.9
BcaB01g02792 Brassica carinata HOM05D003906 ORTHO05D004776 3.3e-112 409.5 426 50.5
unitig_749.g13881 Utricularia gibba HOM05D003906 ORTHO05D004776 9.7e-112 407.9 417 49.9
BolC3t15761H Brassica oleracea HOM05D003906 ORTHO05D004776 1.3e-111 407.5 425 49.9
BraA03t12055Z Brassica rapa HOM05D003906 ORTHO05D004776 2.2e-111 406.8 425 49.6
Sp6g08200 Schrenkiella parvula HOM05D003906 ORTHO05D004776 2.2e-111 406.8 419 50.4
MSTRG.1555 Avicennia marina HOM05D003906 ORTHO05D004776 1.4e-110 404.1 426 50.0
AUR62004621 Chenopodium quinoa HOM05D003906 ORTHO05D004776 1.4e-110 404.1 446 48.2
BcaC01g04722 Brassica carinata HOM05D003906 ORTHO05D004776 1.8e-110 403.7 418 50.2
AT4G09340 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 1.2e-109 401.0 425 50.8
COL.COLO4_24795 Corchorus olitorius HOM05D003906 ORTHO05D004776 2.0e-109 400.2 477 47.0
AL6G42970 Arabidopsis lyrata HOM05D003906 ORTHO05D004776 3.8e-108 396.0 419 50.8
Mapoly0002s0237 Marchantia polymorpha HOM05D003906 ORTHO05D004776 1.5e-107 394.0 434 47.9
Carub.0006s2784 Capsella rubella HOM05D003906 ORTHO05D004776 3.2e-107 392.9 420 50.2
SMO236G0134 Selaginella moellendorffii HOM05D003906 ORTHO05D004776 1.5e-104 384.0 429 48.7
Sabra19G0091700 Salix brachista HOM05D003906 ORTHO05D004776 1.7e-103 380.6 472 45.6
Sabra13G0093600 Salix brachista HOM05D003906 ORTHO05D004776 7.0e-102 375.2 520 42.3
Pp3c25_15350 Physcomitrium patens HOM05D003906 ORTHO05D004776 3.8e-100 369.4 442 46.4
Psat7g226120 Pisum sativum HOM05D003906 ORTHO05D004776 3.8e-100 369.4 287 59.2
Pp3c16_23970 Physcomitrium patens HOM05D003906 ORTHO05D004776 3.6e-98 362.8 446 46.6
CARHR034240 Cardamine hirsuta HOM05D003906 ORTHO05D004776 2.9e-92 343.2 285 56.8
CARHR260350 Cardamine hirsuta HOM05D003906 ORTHO05D004776 1.4e-89 334.3 268 58.6
C03p34490 Brassica napus HOM05D003906 ORTHO05D004776 6.8e-89 332.0 268 57.1
Potri.019G080800 Populus trichocarpa HOM05D003906 ORTHO05D004776 5.7e-88 328.9 330 50.9
vmacro12471 Vaccinium macrocarpon HOM05D003906 ORTHO05D004776 3.7e-87 326.2 336 50.9
CSS0005180 Camellia sinensis var. sinensis HOM05D003906 ORTHO05D004776 4.9e-87 325.9 234 62.8
Nn5g27566 Nelumbo nucifera HOM05D003906 ORTHO05D004776 1.2e-82 311.2 209 68.9
Sc23g0001390 Simmondsia chinensis HOM05D003906 ORTHO05D004776 1.5e-80 304.3 331 48.6
SHI26286 Sapria himalayana HOM05D003906 ORTHO05D004776 1.4e-73 281.2 393 39.7
RcHm_v2.0_Chr7g0228461 Rosa chinensis HOM05D003906 ORTHO05D004776 4.4e-72 276.2 205 63.9
FAN13G2487 Fragaria x ananassa HOM05D003906 ORTHO05D004776 1.1e-65 255.0 192 63.5
Nn3g18941 Nelumbo nucifera HOM05D003906 ORTHO05D004776 1.2e-56 224.9 233 52.4
Cre09.g387801 Chlamydomonas reinhardtii HOM05D003906 ORTHO05D004776 5.8e-56 222.6 376 35.1
AT4G09250 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 4.9e-55 219.5 399 36.3
AT4G09200 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 2.4e-54 217.2 416 36.8
AT4G09310 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 2.4e-54 217.2 416 36.8
SabraUnG0004400 Salix brachista HOM05D003906 ORTHO05D004776 1.7e-52 211.1 210 52.4
RcHm_v2.0_Chr7g0228471 Rosa chinensis HOM05D003906 ORTHO05D004776 1.9e-51 207.6 239 49.0
ClCG08G000300 Citrullus lanatus HOM05D003906 ORTHO05D004776 1.2e-48 198.4 257 44.4
PRCOL_00002342 Prasinoderma coloniale HOM05D003906 ORTHO05D004776 4.9e-47 193.0 227 40.5
Migut.C00143 Erythranthe guttata HOM05D003906 ORTHO05D004776 5.1e-44 183.0 408 33.6
A03p28510 Brassica napus HOM05D003906 ORTHO05D004776 4.0e-41 173.3 236 41.1
BcaB01g02795 Brassica carinata HOM05D003906 ORTHO05D004776 1.2e-40 171.8 236 39.8
BolC3t15755H Brassica oleracea HOM05D003906 ORTHO05D004776 9.3e-38 162.2 217 41.0
Sed0013629 Sechium edule HOM05D003906 ORTHO05D004776 1.0e-36 158.7 409 30.8
Pp3c19_1530 Physcomitrium patens HOM05D003906 ORTHO05D004776 6.2e-34 149.4 358 28.8
C03p34460 Brassica napus HOM05D003906 ORTHO05D004776 5.3e-33 146.4 226 38.1
unitig_32.g11182 Utricularia gibba HOM05D000008 ORTHO05D000005 9.0e-33 145.6 264 34.1
CBR_g30766 Chara braunii HOM05D000019 ORTHO05D000048 4.5e-32 143.3 360 30.3
SEGI_19081 Sequoiadendron giganteum HOM05D003906 ORTHO05D004776 7.6e-32 142.5 126 50.8
Cpa.g.c30412.1 Carica papaya HOM05D003906 ORTHO05D004776 6.4e-31 139.4 101 66.3
Cpa.g.c39095 Carica papaya HOM05D003906 ORTHO05D004776 1.9e-30 137.9 82 76.8
Cfa012929 Carpinus fangiana HOM05D003906 ORTHO05D004776 1.9e-30 137.9 194 42.3
vmacro12470 Vaccinium macrocarpon HOM05D003906 ORTHO05D004776 5.5e-30 136.3 121 57.0
MCO01G564 Micromonas commoda HOM05D003906 ORTHO05D004776 3.5e-29 133.7 401 26.7
Thecc.08G187400 Theobroma cacao HOM05D003906 ORTHO05D004776 7.9e-29 132.5 105 61.0
AagrBONN_evm.TU.Sc2ySwM_228.4865 Anthoceros agrestis HOM05D003906 ORTHO05D011031 1.3e-28 131.7 174 39.1
SEGI_28086 Sequoiadendron giganteum HOM05D003906 ORTHO05D004776 1.1e-27 128.6 93 61.3
AagrBONN_evm.TU.Sc2ySwM_369.175 Anthoceros agrestis HOM05D003906 ORTHO05D004776 3.3e-27 127.1 184 34.8
Cfa023121 Carpinus fangiana HOM05D003906 ORTHO05D004776 6.2e-26 122.9 238 31.9
SEGI_33732 Sequoiadendron giganteum HOM05D003906 ORTHO05D004776 6.2e-26 122.9 157 39.5
CAN.G354.54 Capsicum annuum HOM05D003906 ORTHO05D004776 3.8e-23 113.6 92 56.5
Cre01.g007150 Chlamydomonas reinhardtii HOM05D003906 ORTHO05D004776 3.8e-23 113.6 202 29.2
AagrBONN_evm.TU.Sc2ySwM_362.2414 Anthoceros agrestis HOM05D007564 ORTHO05D009975 4.9e-23 113.2 176 35.8
CARHR034230 Cardamine hirsuta HOM05D003906 ORTHO05D004776 8.4e-23 112.5 101 55.4
DCAR_028625 Daucus carota HOM05D003906 ORTHO05D004776 2.0e-16 91.3 70 58.6
DCAR_028620 Daucus carota HOM05D003906 ORTHO05D004776 5.0e-15 86.7 86 50.0
DCAR_028622 Daucus carota HOM05D003906 ORTHO05D004776 5.0e-15 86.7 86 50.0
BcaC01g04724 Brassica carinata HOM05D003906 ORTHO05D004776 5.7e-11 73.2 153 32.7
PGSC0003DMG400022553 Solanum tuberosum HOM05D003906 ORTHO05D004776 2.6e-08 64.3 52 51.9
AagrBONN_evm.TU.Sc2ySwM_228.4695 Anthoceros agrestis HOM05D002844 ORTHO05D011031 7.7e-08 62.8 217 29.5
SEGI_20889 Sequoiadendron giganteum HOM05D003906 ORTHO05D004776 5.0e-07 60.1 56 48.2
Cfa023097 Carpinus fangiana HOM05D003906 ORTHO05D004776 2.5e-06 57.8 114 34.2
RcHm_v2.0_Chr2g0116231 Rosa chinensis HOM05D004874 ORTHO05D006796 4.2e-06 57.0 216 25.0


User provided reference genes

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