Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3584 Ceratophyllum demersum HOM05D002535 ORTHO05D006846 5.0e-82 307.8 160 100.0
TAR375G1062 Trochodendron aralioides HOM05D002535 ORTHO05D006846 1.1e-33 147.1 138 58.7
MBI04_g09825_MAGBIO Magnolia biondii HOM05D002535 ORTHO05D006846 1.6e-32 143.3 134 57.5
Nn1g09652 Nelumbo nucifera HOM05D002535 ORTHO05D006846 2.1e-32 142.9 147 53.7
PSO782G3476 Papaver somniferum HOM05D002535 ORTHO05D006846 1.4e-31 140.2 135 58.5
PSO063G0674 Papaver somniferum HOM05D002535 ORTHO05D006846 9.0e-31 137.5 129 58.9
Dinv17281 Davidia involucrata HOM05D002535 ORTHO05D006846 1.2e-27 127.1 130 55.4
Sopen03g021730 Solanum pennellii HOM05D002535 ORTHO05D006846 1.6e-27 126.7 143 54.5
RcHm_v2.0_Chr1g0383251 Rosa chinensis HOM05D002535 ORTHO05D006846 2.1e-27 126.3 127 52.8
Lsat_1_v5_gn_2_5220 Lactuca sativa HOM05D002535 ORTHO05D006846 6.0e-27 124.8 130 52.3
FAN10G2813 Fragaria x ananassa HOM05D002535 ORTHO05D006846 7.9e-27 124.4 128 54.7
Cfa016132 Carpinus fangiana HOM05D002535 ORTHO05D006846 1.0e-26 124.0 132 54.5
FAN10G1460 Fragaria x ananassa HOM05D002535 ORTHO05D006846 1.8e-26 123.2 127 54.3
PGR142G0839 Punica granatum HOM05D002535 ORTHO05D006846 2.3e-26 122.9 140 55.0
FvH4_7g33260 Fragaria vesca HOM05D002535 ORTHO05D006846 3.0e-26 122.5 127 53.5
Solyc03g080010.3 Solanum lycopersicum HOM05D002535 ORTHO05D006846 3.0e-26 122.5 143 53.1
Prupe.2G321600 Prunus persica HOM05D002535 ORTHO05D006846 3.9e-26 122.1 144 52.1
Haze_00328 Corylus avellana HOM05D002535 ORTHO05D006846 5.1e-26 121.7 128 54.7
FAN03G0390 Fragaria x ananassa HOM05D002535 ORTHO05D006846 5.1e-26 121.7 127 53.5
Actinidia08716 Actinidia chinensis HOM05D002535 ORTHO05D006846 8.7e-26 120.9 123 53.7
Manes.18G108000 Manihot esculenta HOM05D002535 ORTHO05D006846 1.9e-25 119.8 131 54.2
Peaxi162Scf01026g00257 Petunia axillaris HOM05D002535 ORTHO05D006846 1.9e-25 119.8 150 48.7
CANSAT21G0133 Cannabis sativa HOM05D002535 ORTHO05D006846 2.5e-25 119.4 148 48.6
CsaV3_4G009720 Cucumis sativus L. HOM05D002535 ORTHO05D006846 5.6e-25 118.2 109 59.6
CiPaw.05G208400 Carya illinoinensis HOM05D002535 ORTHO05D006846 7.4e-25 117.9 153 47.7
Nitab4.5_0000021g0180 Nicotiana tabacum HOM05D002535 ORTHO05D006846 9.6e-25 117.5 130 52.3
Sed0019266 Sechium edule HOM05D002535 ORTHO05D006846 2.8e-24 115.9 112 57.1
MELO3C024845.2 Cucumis melo HOM05D002535 ORTHO05D006846 3.7e-24 115.5 109 58.7
MD07G1302400 Malus domestica HOM05D002535 ORTHO05D006846 3.7e-24 115.5 99 62.6
CAN.G303.52 Capsicum annuum HOM05D002535 ORTHO05D006846 4.8e-24 115.2 131 49.6
AUR62005953 Chenopodium quinoa HOM05D002535 ORTHO05D006846 8.1e-24 114.4 151 45.7
TWI39G1073 Tripterygium wilfordii HOM05D002535 ORTHO05D006846 8.1e-24 114.4 105 58.1
THA.LOC104825164 Tarenaya hassleriana HOM05D002535 ORTHO05D006846 1.1e-23 114.0 105 59.0
EL10Ac3g05139 Beta vulgaris HOM05D002535 ORTHO05D006846 1.4e-23 113.6 105 59.0
vmacro06471 Vaccinium macrocarpon HOM05D002535 ORTHO05D006846 1.8e-23 113.2 124 50.8
HanXRQChr14g0452381 Helianthus annuus HOM05D002535 ORTHO05D006846 2.4e-23 112.8 108 55.6
Ah.13g071000 Amaranthus hybridus HOM05D002535 ORTHO05D006846 3.1e-23 112.5 105 58.1
CSS0030602 Camellia sinensis var. sinensis HOM05D002535 ORTHO05D006846 3.1e-23 112.5 128 51.6
Migut.F00161 Erythranthe guttata HOM05D002535 ORTHO05D006846 4.0e-23 112.1 102 55.9
Ciclev10018840m.g Citrus clementina HOM05D002535 ORTHO05D006846 5.3e-23 111.7 119 52.9
Cc01_g06440 Coffea canephora HOM05D002535 ORTHO05D006846 5.3e-23 111.7 102 59.8
QL09p006081 Quercus lobata HOM05D002535 ORTHO05D006846 5.3e-23 111.7 104 58.7
Hma1.2p1_0115F.1_g055690 Hydrangea macrophylla HOM05D002535 ORTHO05D006846 6.9e-23 111.3 101 56.4
ATR0579G153 Amborella trichopoda HOM05D002535 ORTHO05D006846 9.0e-23 110.9 103 56.3
CSS0041054 Camellia sinensis var. sinensis HOM05D002535 ORTHO05D006846 9.0e-23 110.9 128 50.8
Oeu055378.1 Olea europaea HOM05D002535 ORTHO05D006846 1.2e-22 110.5 113 52.2
Rhsim03G0218100 Rhododendron simsii HOM05D002535 ORTHO05D006846 3.4e-22 109.0 104 54.8
Sc19g0000400 Simmondsia chinensis HOM05D002535 ORTHO05D006846 4.5e-22 108.6 105 57.1
COL.COLO4_14395 Corchorus olitorius HOM05D002535 ORTHO05D006846 1.3e-21 107.1 105 55.2
Aa31LG3G9940 Aethionema arabicum HOM05D002535 ORTHO05D006846 1.7e-21 106.7 105 58.1
SGA_v2.0_scaffold44G16838 Striga asiatica HOM05D002535 ORTHO05D006846 2.2e-21 106.3 102 52.0
HPP92_007410 Vanilla planifolia HOM05D002535 ORTHO05D006846 2.2e-21 106.3 111 53.2
Aqoxy5G04389 Aquilegia oxysepala HOM05D002535 ORTHO05D006846 2.9e-21 105.9 97 53.6
SalBow6G2866 Salvia bowleyana HOM05D002535 ORTHO05D006846 2.9e-21 105.9 103 56.3
Cpa.g.sc3.180 Carica papaya HOM05D002535 ORTHO05D006846 8.4e-21 104.4 104 54.8
Atru.chr12.2507 Acer truncatum HOM05D002535 ORTHO05D006846 1.4e-20 103.6 118 51.7
Atru.chr12.2530 Acer truncatum HOM05D002535 ORTHO05D006846 1.4e-20 103.6 118 51.7
Thecc.03G211600 Theobroma cacao HOM05D002535 ORTHO05D006846 1.4e-20 103.6 105 52.4
Lj1C1030G8 Lonicera japonica HOM05D002535 ORTHO05D006846 1.9e-20 103.2 97 57.7
Potri.012G005000 Populus trichocarpa HOM05D002535 ORTHO05D006846 1.9e-20 103.2 99 59.6
Carub.0008s1437 Capsella rubella HOM05D002535 ORTHO05D006846 2.5e-20 102.8 104 54.8
Sabra12G0000700 Salix brachista HOM05D002535 ORTHO05D006846 2.5e-20 102.8 98 58.2
Sabra12G0007000 Salix brachista HOM05D002535 ORTHO05D006846 2.5e-20 102.8 98 58.2
GSVIVG01038675001 Vitis vinifera HOM05D002535 ORTHO05D006846 2.5e-20 102.8 99 58.6
AT5G54090 Arabidopsis thaliana HOM05D002535 ORTHO05D006846 4.2e-20 102.1 104 54.8
arahy.Tifrunner.gnm1.ann1.DLGH4W Arachis hypogaea HOM05D002535 ORTHO05D006846 4.2e-20 102.1 104 56.7
Duzib084G0662 Durio zibethinus HOM05D002535 ORTHO05D006846 4.2e-20 102.1 104 53.8
AL8G29210 Arabidopsis lyrata HOM05D002535 ORTHO05D006846 5.5e-20 101.7 104 53.8
arahy.Tifrunner.gnm1.ann1.HMHY7M Arachis hypogaea HOM05D002535 ORTHO05D006846 5.5e-20 101.7 104 56.7
Gorai.008G263400 Gossypium raimondii HOM05D002535 ORTHO05D006846 5.5e-20 101.7 104 52.9
VMungo0647G2508 Vigna mungo HOM05D002535 ORTHO05D006846 5.5e-20 101.7 99 57.6
SEGI_06769 Sequoiadendron giganteum HOM05D002535 ORTHO05D006846 7.1e-20 101.3 111 48.6
BcaB05g22108 Brassica carinata HOM05D002535 ORTHO05D006846 9.3e-20 100.9 104 53.8
A02p10580 Brassica napus HOM05D002535 ORTHO05D006846 9.3e-20 100.9 104 53.8
BraA02t06123Z Brassica rapa HOM05D002535 ORTHO05D006846 9.3e-20 100.9 104 53.8
BcaC03g14353 Brassica carinata HOM05D002535 ORTHO05D006846 1.2e-19 100.5 104 53.8
BolC2t07896H Brassica oleracea HOM05D002535 ORTHO05D006846 1.2e-19 100.5 104 53.8
Glyma.02G221300 Glycine max HOM05D002535 ORTHO05D006846 1.2e-19 100.5 106 55.7
Phvul.008G188400 Phaseolus vulgaris HOM05D002535 ORTHO05D006846 1.2e-19 100.5 99 56.6
unitig_748.g7357 Utricularia gibba HOM05D002535 ORTHO05D006846 1.6e-19 100.1 102 52.9
C02p17660 Brassica napus HOM05D002535 ORTHO05D006846 2.1e-19 99.8 104 53.8
Thhalv10012724m.g Eutrema salsugineum HOM05D002535 ORTHO05D006846 2.1e-19 99.8 104 52.9
AUR62028111 Chenopodium quinoa HOM05D002535 ORTHO05D006846 4.6e-19 98.6 151 41.1
LjContig00155g0000379 Lotus japonicus HOM05D002535 ORTHO05D006846 4.6e-19 98.6 139 45.3
Lalb_Chr10g0103011 Lupinus albus HOM05D002535 ORTHO05D006846 4.6e-19 98.6 99 52.5
Nitab4.5_0004582g0020 Nicotiana tabacum HOM05D002535 ORTHO05D006846 4.6e-19 98.6 130 47.7
Ca_05547_v3 Cicer arietinum L. HOM05D002535 ORTHO05D006846 6.0e-19 98.2 99 58.6
Gohir.A12G245000 Gossypium hirsutum HOM05D002535 ORTHO05D006846 6.0e-19 98.2 104 51.9
Sp6g16120 Schrenkiella parvula HOM05D002535 ORTHO05D006846 1.0e-18 97.4 104 51.9
ClCG07G009710 Citrullus lanatus HOM05D002535 ORTHO05D006846 3.0e-18 95.9 170 38.8
Medtr5g068600 Medicago truncatula HOM05D002535 ORTHO05D006846 3.9e-18 95.5 99 57.6
Hund21077 Selenicereus undatus HOM05D002535 ORTHO05D006846 3.3e-17 92.4 90 55.6
TPR.G5823 Trifolium pratense HOM05D002535 ORTHO05D006846 5.6e-17 91.7 99 55.6
Psat7g096080 Pisum sativum HOM05D002535 ORTHO05D006846 9.6e-17 90.9 118 48.3
DCAR_010560 Daucus carota HOM05D002535 ORTHO05D006846 1.3e-16 90.5 138 42.0
ECA238G0251 Erigeron canadensis HOM05D002676 ORTHO05D006846 2.1e-16 89.7 98 50.0
Zm00001eb220610 Zea mays HOM05D002535 ORTHO05D006846 6.2e-16 88.2 147 36.7
SMO239G0005 Selaginella moellendorffii HOM05D002535 ORTHO05D006846 1.0e-10 70.9 111 38.7
CBR_g37825 Chara braunii HOM05D002535 ORTHO05D006846 1.8e-10 70.1 107 38.3
Mapoly0023s0121 Marchantia polymorpha HOM05D002535 ORTHO05D006846 1.6e-08 63.5 99 37.4
Pp3c5_20780 Physcomitrium patens HOM05D002535 ORTHO05D006846 2.2e-08 63.2 100 38.0
AagrBONN_evm.TU.Sc2ySwM_344.1529 Anthoceros agrestis HOM05D002535 ORTHO05D006846 2.8e-08 62.8 108 36.1
FAN01G2729 Fragaria x ananassa HOM05D002535 ORTHO05D006846 3.1e-07 59.3 59 54.2
Carub.0002s1037 Capsella rubella HOM05D002535 ORTHO05D008858 4.1e-07 58.9 121 36.4
TWI38G0664 Tripterygium wilfordii HOM05D002535 ORTHO05D008858 5.3e-07 58.5 99 36.4
AT1G65070 Arabidopsis thaliana HOM05D002535 ORTHO05D008858 2.0e-06 56.6 100 38.0
Potri.004G041900 Populus trichocarpa HOM05D002535 ORTHO05D008858 2.0e-06 56.6 99 35.4
AL2G19710 Arabidopsis lyrata HOM05D002535 ORTHO05D008858 3.4e-06 55.8 144 31.9
CARHR053870 Cardamine hirsuta HOM05D002535 ORTHO05D008858 3.4e-06 55.8 97 36.1
Nitab4.5_0019564g0010 Nicotiana tabacum HOM05D002535 ORTHO05D008858 4.5e-06 55.5 132 30.3
Eucgr.K00458 Eucalyptus grandis HOM05D002535 ORTHO05D006846 5.9e-06 55.1 55 56.4
Thhalv10022461m.g Eutrema salsugineum HOM05D002535 ORTHO05D008858 5.9e-06 55.1 100 37.0
Hund23717 Selenicereus undatus HOM05D002535 ORTHO05D008858 5.9e-06 55.1 55 43.6
Migut.M01151 Erythranthe guttata HOM05D002535 ORTHO05D008858 7.7e-06 54.7 105 34.3


User provided reference genes

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