Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3541 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 0.0e+00 1292.7 679 100.0
CDE08G1118 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 0.0e+00 1178.3 678 91.6
TAR624G1104 Trochodendron aralioides HOM05D003995 ORTHO05D004800 9.2e-202 707.6 717 56.2
TAR102G0002 Trochodendron aralioides HOM05D003995 ORTHO05D004800 6.2e-190 668.3 720 53.6
MBI04_g27074_MAGBIO Magnolia biondii HOM05D003266 ORTHO05D003718 3.1e-189 666.0 725 53.8
GSVIVG01017039001 Vitis vinifera HOM05D003995 ORTHO05D004800 7.6e-188 661.4 717 53.8
COL.COLO4_30474 Corchorus olitorius HOM05D003995 ORTHO05D004800 1.7e-187 660.2 715 54.7
Cfa002115 Carpinus fangiana HOM05D003995 ORTHO05D004800 3.5e-185 652.5 720 54.3
QL05p021104 Quercus lobata HOM05D003995 ORTHO05D004800 4.6e-185 652.1 717 53.7
PSO210G6397 Papaver somniferum HOM05D003995 ORTHO05D004800 1.0e-184 651.0 719 54.0
PSO210G6330 Papaver somniferum HOM05D003995 ORTHO05D004800 2.5e-183 646.4 720 53.6
CiPaw.02G147500 Carya illinoinensis HOM05D003995 ORTHO05D004800 1.3e-182 644.0 717 52.4
TWI75G1811 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 2.4e-181 639.8 711 52.0
Aqoxy7G01498 Aquilegia oxysepala HOM05D003995 ORTHO05D004800 1.2e-180 637.5 712 52.7
Haze_16334 Corylus avellana HOM05D003995 ORTHO05D004800 1.5e-180 637.1 736 52.4
Thecc.06G096000 Theobroma cacao HOM05D003995 ORTHO05D004800 4.9e-179 632.1 714 52.4
VMungo0331G0049 Vigna mungo HOM05D003995 ORTHO05D004800 1.4e-178 630.6 715 52.0
Cpa.g.sc109.33 Carica papaya HOM05D003995 ORTHO05D004800 1.9e-178 630.2 704 52.6
TWI12G0239 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 1.9e-178 630.2 718 51.4
FvH4_6g32000 Fragaria vesca HOM05D003995 ORTHO05D004800 1.6e-177 627.1 716 52.1
Prupe.3G063200 Prunus persica HOM05D003995 ORTHO05D004800 2.7e-177 626.3 721 52.1
Actinidia21699 Actinidia chinensis HOM05D003995 ORTHO05D004800 3.5e-177 625.9 718 51.5
TWI18G0079 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 3.5e-177 625.9 713 51.5
Sc12g0009570 Simmondsia chinensis HOM05D003995 ORTHO05D004800 7.9e-177 624.8 716 51.7
Atru.chr1.3467 Acer truncatum HOM05D003995 ORTHO05D004800 1.8e-176 623.6 703 54.1
MD09G1207100 Malus domestica HOM05D003995 ORTHO05D004800 6.7e-176 621.7 719 51.3
Hma1.2p1_0659F.1_g197350 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 5.6e-175 618.6 711 52.5
ATR0705G117 Amborella trichopoda HOM05D003995 ORTHO05D004800 7.4e-175 618.2 712 52.2
Hma1.2p1_1689F.1_g297670 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 1.3e-174 617.5 720 52.4
Glyma.07G017700 Glycine max HOM05D003995 ORTHO05D004800 2.1e-174 616.7 721 52.4
CiPaw.01G233700 Carya illinoinensis HOM05D003995 ORTHO05D004800 1.4e-173 614.0 720 51.4
Gohir.D05G132500 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.8e-173 613.6 718 51.4
Gorai.009G136200 Gossypium raimondii HOM05D003995 ORTHO05D004800 3.1e-173 612.8 720 51.1
Peaxi162Scf00090g00073 Petunia axillaris HOM05D003995 ORTHO05D004800 6.9e-173 611.7 719 52.7
Gohir.A05G128000 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.2e-172 610.9 720 51.0
Phvul.010G147000 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 1.2e-172 610.9 717 52.6
Lalb_Chr01g0013091 Lupinus albus HOM05D003995 ORTHO05D004800 2.6e-172 609.8 711 52.6
Cc00_g10390 Coffea canephora HOM05D003995 ORTHO05D004800 5.8e-172 608.6 723 50.8
Gohir.A02G119100 Gossypium hirsutum HOM05D003995 ORTHO05D004800 5.8e-172 608.6 723 51.5
Lj3g0012728 Lotus japonicus HOM05D003995 ORTHO05D004800 7.6e-172 608.2 715 50.3
Dinv30461 Davidia involucrata HOM05D003995 ORTHO05D004800 1.3e-171 607.4 716 50.6
Manes.11G036200 Manihot esculenta HOM05D003995 ORTHO05D004800 4.9e-171 605.5 733 49.8
FAN05G2434 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.4e-170 604.0 732 50.4
TPR.G14825 Trifolium pratense HOM05D003995 ORTHO05D004800 1.9e-170 603.6 724 50.4
Manes.04G131700 Manihot esculenta HOM05D003995 ORTHO05D004800 2.5e-170 603.2 719 50.3
Potri.001G187000 Populus trichocarpa HOM05D003995 ORTHO05D004800 5.5e-170 602.1 715 50.3
CANSAT56G4226 Cannabis sativa HOM05D003995 ORTHO05D004800 2.7e-169 599.7 715 50.9
CSS0043166 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 4.6e-169 599.0 716 50.3
Ca_11524_v3 Cicer arietinum L. HOM05D003995 ORTHO05D004800 4.6e-169 599.0 723 51.0
Dinv38000 Davidia involucrata HOM05D003995 ORTHO05D004800 4.6e-169 599.0 695 50.9
CSS0042187 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 7.9e-169 598.2 716 50.3
Gohir.D03G059900 Gossypium hirsutum HOM05D003995 ORTHO05D004800 7.9e-169 598.2 723 51.2
FAN14G0476 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.3e-168 597.4 716 50.7
MD17G1187800 Malus domestica HOM05D003995 ORTHO05D004800 3.0e-168 596.3 726 50.3
Medtr8g013720 Medicago truncatula HOM05D003995 ORTHO05D004800 5.1e-168 595.5 726 50.7
Oeu050081.1 Olea europaea HOM05D003995 ORTHO05D004800 1.5e-167 594.0 708 50.8
Psat4g198440 Pisum sativum HOM05D003995 ORTHO05D004800 1.5e-167 594.0 726 49.0
Nitab4.5_0002549g0020 Nicotiana tabacum HOM05D003995 ORTHO05D004800 2.5e-167 593.2 710 51.5
arahy.Tifrunner.gnm1.ann1.8U94IH Arachis hypogaea HOM05D003995 ORTHO05D004800 4.3e-167 592.4 718 51.0
THA.LOC104810534 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 4.3e-167 592.4 714 51.5
CAN.G60.5 Capsicum annuum HOM05D003995 ORTHO05D004800 5.7e-167 592.0 718 51.8
Gorai.003G063800 Gossypium raimondii HOM05D003995 ORTHO05D004800 5.7e-167 592.0 715 51.0
Hund06648 Selenicereus undatus HOM05D003995 ORTHO05D004800 5.7e-167 592.0 720 50.6
PGR102G1287 Punica granatum HOM05D003995 ORTHO05D004800 9.6e-167 591.3 712 50.3
CSS0032416 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 3.7e-166 589.3 707 50.2
Duzib235G0154 Durio zibethinus HOM05D003995 ORTHO05D004800 4.8e-166 589.0 708 50.3
Oeu017626.1 Olea europaea HOM05D003995 ORTHO05D004800 6.2e-166 588.6 711 50.5
Lalb_Chr25g0280081 Lupinus albus HOM05D003995 ORTHO05D004800 8.2e-166 588.2 710 51.3
PGR102G1422 Punica granatum HOM05D003995 ORTHO05D004800 1.4e-165 587.4 724 50.3
Ciclev10027380m.g Citrus clementina HOM05D003995 ORTHO05D004800 6.9e-165 585.1 735 49.9
DCAR_019957 Daucus carota HOM05D003995 ORTHO05D004800 1.5e-164 583.9 711 49.4
PGSC0003DMG400008535 Solanum tuberosum HOM05D003995 ORTHO05D004800 1.5e-164 583.9 722 51.2
AUR62031875 Chenopodium quinoa HOM05D003995 ORTHO05D004800 1.0e-163 581.3 718 49.2
MSTRG.23509 Avicennia marina HOM05D003995 ORTHO05D004800 2.2e-163 580.1 716 47.3
THA.LOC104817968 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 3.8e-163 579.3 712 50.6
EL10Ac9g22110 Beta vulgaris HOM05D003995 ORTHO05D004800 5.0e-163 578.9 722 48.3
Aa31LG8G3420 Aethionema arabicum HOM05D003995 ORTHO05D004800 9.3e-162 574.7 714 50.3
Eucgr.F03056 Eucalyptus grandis HOM05D003995 ORTHO05D004800 9.3e-162 574.7 716 48.7
CsaV3_3G023750 Cucumis sativus L. HOM05D003995 ORTHO05D004800 3.5e-161 572.8 724 48.5
CARHR091480 Cardamine hirsuta HOM05D003995 ORTHO05D004800 4.6e-161 572.4 709 50.4
FAN02G0974 Fragaria x ananassa HOM05D003995 ORTHO05D004800 7.9e-161 571.6 718 49.2
AT3G16270 Arabidopsis thaliana HOM05D003995 ORTHO05D004800 1.0e-160 571.2 711 50.2
Glyma.08G202900 Glycine max HOM05D003995 ORTHO05D004800 1.0e-160 571.2 714 50.0
C05p50240 Brassica napus HOM05D003995 ORTHO05D004800 3.0e-160 569.7 711 48.9
Carub.0003s1602 Capsella rubella HOM05D003995 ORTHO05D004800 3.9e-160 569.3 716 49.7
Eucgr.J02949 Eucalyptus grandis HOM05D003995 ORTHO05D004800 3.9e-160 569.3 724 50.0
BraA05t22150Z Brassica rapa HOM05D003995 ORTHO05D004800 6.7e-160 568.5 712 48.7
AL3G29010 Arabidopsis lyrata HOM05D003995 ORTHO05D004800 8.7e-160 568.2 711 49.8
FAN09G2208 Fragaria x ananassa HOM05D003995 ORTHO05D004800 8.7e-160 568.2 713 48.9
Migut.H00960 Erythranthe guttata HOM05D003995 ORTHO05D004800 2.5e-159 566.6 711 48.8
BcaB06g25717 Brassica carinata HOM05D003995 ORTHO05D004800 3.3e-159 566.2 712 49.0
BcaC05g28900 Brassica carinata HOM05D003995 ORTHO05D004800 7.4e-159 565.1 712 48.6
BolC5t33775H Brassica oleracea HOM05D003995 ORTHO05D004800 7.4e-159 565.1 712 48.6
Lsat_1_v5_gn_2_39201 Lactuca sativa HOM05D003995 ORTHO05D004800 7.4e-159 565.1 710 48.7
A05p33250 Brassica napus HOM05D003995 ORTHO05D004800 9.7e-159 564.7 711 48.5
Thhalv10020187m.g Eutrema salsugineum HOM05D003995 ORTHO05D004800 9.7e-159 564.7 708 49.4
Os01g0232400 Oryza sativa ssp. japonica HOM05D003995 ORTHO05D004800 1.3e-158 564.3 711 49.8
Sopen04g017970 Solanum pennellii HOM05D003995 ORTHO05D004800 1.3e-158 564.3 718 50.7
Gohir.D06G197450 Gossypium hirsutum HOM05D003995 ORTHO05D004800 3.7e-158 562.8 717 49.4
Solyc04g047770.3 Solanum lycopersicum HOM05D003995 ORTHO05D004800 3.7e-158 562.8 718 51.0
Gorai.010G229800 Gossypium raimondii HOM05D003995 ORTHO05D004800 4.8e-158 562.4 717 49.4
AUR62022169 Chenopodium quinoa HOM05D003995 ORTHO05D004800 6.3e-158 562.0 717 48.5
Sp3g14640 Schrenkiella parvula HOM05D003995 ORTHO05D004800 8.2e-158 561.6 706 48.4
Sed0011470 Sechium edule HOM05D003995 ORTHO05D004800 3.1e-157 559.7 713 48.0
Ah.01g005620 Amaranthus hybridus HOM05D003995 ORTHO05D004800 5.0e-155 552.4 719 48.1
SGA_v2.0_scaffold44G16540 Striga asiatica HOM05D003995 ORTHO05D004800 2.7e-153 546.6 727 47.9
Zm00001eb339300 Zea mays HOM05D003995 ORTHO05D004800 3.6e-153 546.2 712 49.2
Zm00001eb119170 Zea mays HOM05D003995 ORTHO05D004800 1.8e-152 543.9 709 49.4
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 3.0e-152 543.1 706 48.2
Nn2g11632 Nelumbo nucifera HOM05D003995 ORTHO05D004800 5.1e-152 542.3 715 47.0
Glyma.13G355800 Glycine max HOM05D003995 ORTHO05D004800 8.8e-152 541.6 727 48.7
Sed0003559 Sechium edule HOM05D003995 ORTHO05D004800 1.5e-151 540.8 715 48.0
HanXRQChr14g0434431 Helianthus annuus HOM05D003995 ORTHO05D004800 3.4e-148 529.6 707 48.8
Nitab4.5_0004354g0010 Nicotiana tabacum HOM05D003995 ORTHO05D004800 4.5e-148 529.3 876 42.8
HanXRQChr01g0017801 Helianthus annuus HOM05D003995 ORTHO05D004800 3.2e-146 523.1 721 47.7
Rhsim08G0225700 Rhododendron simsii HOM05D003995 ORTHO05D004800 1.0e-144 518.1 719 46.6
Phvul.005G170500 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 1.7e-142 510.8 727 47.7
ECA248G2833 Erigeron canadensis HOM05D003995 ORTHO05D004800 3.8e-139 499.6 705 47.9
VMungo1080G0563 Vigna mungo HOM05D003995 ORTHO05D004800 1.5e-138 497.7 716 46.9
SalBow1G2060 Salvia bowleyana HOM05D003995 ORTHO05D004800 4.4e-135 486.1 708 43.6
SHI11063 Sapria himalayana HOM05D003995 ORTHO05D004800 2.2e-134 483.8 680 46.0
HPP92_008092 Vanilla planifolia HOM05D003995 ORTHO05D004800 3.7e-134 483.0 729 44.6
Nn3g18163 Nelumbo nucifera HOM05D003995 ORTHO05D004800 2.2e-131 473.8 383 65.0
SEGI_23305 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 3.2e-130 469.9 732 43.4
MELO3C012986.2 Cucumis melo HOM05D003995 ORTHO05D004800 1.2e-127 461.5 649 45.1
MBI01_g24453_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 5.9e-124 449.1 697 43.9
SalBow1G1048 Salvia bowleyana HOM05D003995 ORTHO05D004800 1.2e-121 441.4 374 60.7
SalBow1G5856 Salvia bowleyana HOM05D003995 ORTHO05D004800 1.2e-121 441.4 374 60.7
Gohir.A06G188875 Gossypium hirsutum HOM05D003995 ORTHO05D004800 9.8e-119 431.8 373 63.0
RcHm_v2.0_Chr2g0139591 Rosa chinensis HOM05D003995 ORTHO05D004800 8.6e-107 392.1 319 66.5
vmacro18871 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 8.6e-107 392.1 321 64.8
Mapoly0022s0096 Marchantia polymorpha HOM05D003995 ORTHO05D004800 5.8e-95 352.8 761 37.7
SMO340G0180 Selaginella moellendorffii HOM05D003995 ORTHO05D004800 9.8e-95 352.1 715 37.5
Lj4A820G41 Lonicera japonica HOM05D003995 ORTHO05D004800 6.6e-91 339.3 556 42.4
Pp3c2_17390 Physcomitrium patens HOM05D003995 ORTHO05D004800 9.9e-87 325.5 732 36.9
MBI01_g39826_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 6.4e-86 322.8 600 40.2
QL04p048641 Quercus lobata HOM05D003995 ORTHO05D004800 8.4e-86 322.4 611 38.3
AagrBONN_evm.TU.Sc2ySwM_362.567 Anthoceros agrestis HOM05D003995 ORTHO05D004800 1.1e-85 322.0 766 33.9
Hund00665 Selenicereus undatus HOM05D003995 ORTHO05D004800 2.6e-63 247.7 496 37.9
CBR_g36315 Chara braunii HOM05D003995 ORTHO05D004800 2.9e-62 244.2 556 34.5
RcHm_v2.0_Chr2g0139601 Rosa chinensis HOM05D003995 ORTHO05D004800 8.7e-59 232.6 401 40.4
CBR_g31940 Chara braunii HOM05D003995 ORTHO05D004800 1.3e-57 228.8 504 34.9
Actinidia39150 Actinidia chinensis HOM05D003995 ORTHO05D004800 6.9e-56 223.0 351 42.7
Sabra01G0153300 Salix brachista HOM05D003995 ORTHO05D004800 1.2e-52 212.2 395 39.2
arahy.Tifrunner.gnm1.ann1.QE1TJP Arachis hypogaea HOM05D003995 ORTHO05D004800 3.0e-51 207.6 395 39.2
Actinidia32710 Actinidia chinensis HOM05D003995 ORTHO05D004800 3.7e-49 200.7 151 68.2
CDE02G4060 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 2.8e-41 174.5 158 57.0
CBR_g25753 Chara braunii HOM05D003995 ORTHO05D004800 3.8e-38 164.1 237 44.7
Actinidia09000 Actinidia chinensis HOM05D003995 ORTHO05D004800 3.3e-34 151.0 166 51.8
HanXRQChr10g0310971 Helianthus annuus HOM05D003995 ORTHO05D004800 3.4e-31 141.0 165 50.3
ClCG07G013220 Citrullus lanatus HOM05D003995 ORTHO05D004800 1.6e-28 132.1 322 35.4
Cre12.g545300 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 4.4e-26 124.0 389 28.3
vmacro18870 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 9.7e-26 122.9 353 32.3
Actinidia32709 Actinidia chinensis HOM05D003995 ORTHO05D004800 6.3e-25 120.2 330 34.8
Cre12.g545150 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 4.1e-24 117.5 372 28.5
FAN18G0014 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.6e-23 115.5 69 81.2
Lj4C820T9 Lonicera japonica HOM05D003995 ORTHO05D004800 3.5e-23 114.4 69 79.7
PRCOL_00002233 Prasinoderma coloniale HOM05D003995 ORTHO05D004800 1.6e-20 105.5 538 25.3
MBI07_g11499_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 8.8e-19 99.8 62 77.4
Glyma.15G018300 Glycine max HOM05D003995 ORTHO05D004800 3.3e-18 97.8 246 38.6
Actinidia08998 Actinidia chinensis HOM05D003995 ORTHO05D004800 1.7e-17 95.5 57 82.5
SEGI_12342 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 2.0e-15 88.6 76 59.2
Lsat_1_v5_gn_7_27180 Lactuca sativa HOM05D003995 ORTHO05D004605 2.7e-15 88.2 59 72.9
FvH4_5g23151 Fragaria vesca HOM05D003995 ORTHO05D004800 4.5e-15 87.4 51 84.3
FvH4_7g32131 Fragaria vesca HOM05D003995 ORTHO05D004800 3.8e-14 84.3 51 82.4
Gorai.003G083400 Gossypium raimondii HOM05D003995 ORTHO05D004800 5.7e-10 70.5 88 45.5
Gohir.D03G024850 Gossypium hirsutum HOM05D003995 ORTHO05D004800 2.2e-09 68.6 89 47.2
MBI03_g21265_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 7.0e-08 63.5 59 54.2


User provided reference genes

Program Settings