Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3539 Ceratophyllum demersum HOM05D002170 ORTHO05D005003 0.0e+00 1090.5 587 100.0
CDE05G2090 Ceratophyllum demersum HOM05D002170 ORTHO05D005003 9.5e-297 1023.1 576 95.5
MBI15_g08396_MAGBIO Magnolia biondii HOM05D002170 ORTHO05D005003 7.2e-236 820.8 593 74.0
Nn8g40047 Nelumbo nucifera HOM05D002170 ORTHO05D005003 3.2e-228 795.4 598 70.7
GSVIVG01035985001 Vitis vinifera HOM05D002170 ORTHO05D005003 7.2e-228 794.3 585 73.5
TAR625G0335 Trochodendron aralioides HOM05D002170 ORTHO05D005003 1.2e-227 793.5 582 73.4
TAR636G2364 Trochodendron aralioides HOM05D002170 ORTHO05D005003 5.2e-226 788.1 575 73.4
QL02p018561 Quercus lobata HOM05D002170 ORTHO05D005003 1.1e-223 780.4 586 74.1
Prupe.1G395500 Prunus persica HOM05D002170 ORTHO05D005003 3.1e-223 778.9 587 71.6
MD15G1042300 Malus domestica HOM05D002170 ORTHO05D005003 1.6e-222 776.5 589 75.2
FAN27G0183 Fragaria x ananassa HOM05D002170 ORTHO05D005003 4.5e-222 775.0 587 72.2
ATR0749G037 Amborella trichopoda HOM05D002170 ORTHO05D005003 7.7e-222 774.2 596 69.6
Cpa.g.sc148.25 Carica papaya HOM05D002170 ORTHO05D005003 7.7e-222 774.2 562 74.2
FvH4_2g41230 Fragaria vesca HOM05D002170 ORTHO05D005003 1.0e-221 773.9 587 72.2
RcHm_v2.0_Chr6g0299281 Rosa chinensis HOM05D002170 ORTHO05D005003 8.5e-221 770.8 586 74.9
FAN15G1846 Fragaria x ananassa HOM05D002170 ORTHO05D005003 1.1e-220 770.4 587 73.9
Potri.018G017200 Populus trichocarpa HOM05D002170 ORTHO05D005003 4.2e-220 768.5 576 71.9
Dinv10283 Davidia involucrata HOM05D002170 ORTHO05D005003 5.5e-220 768.1 598 70.2
Nn2g14023 Nelumbo nucifera HOM05D002170 ORTHO05D005003 2.1e-219 766.1 600 70.3
Potri.006G265700 Populus trichocarpa HOM05D002170 ORTHO05D005003 2.1e-219 766.1 599 69.6
Manes.03G007500 Manihot esculenta HOM05D002170 ORTHO05D005003 4.7e-219 765.0 586 74.6
MD08G1054700 Malus domestica HOM05D002170 ORTHO05D005003 6.1e-219 764.6 589 74.9
Ciclev10007357m.g Citrus clementina HOM05D002170 ORTHO05D005003 1.0e-218 763.8 590 70.3
Haze_21390 Corylus avellana HOM05D002170 ORTHO05D005003 2.3e-218 762.7 596 72.1
CiPaw.07G231100 Carya illinoinensis HOM05D002170 ORTHO05D005003 8.8e-218 760.8 586 70.1
Thecc.09G014300 Theobroma cacao HOM05D002170 ORTHO05D005003 8.8e-218 760.8 589 71.3
Aqoxy7G03347 Aquilegia oxysepala HOM05D002170 ORTHO05D005003 1.5e-217 760.0 596 68.6
Dinv18466 Davidia involucrata HOM05D002170 ORTHO05D005003 2.0e-217 759.6 595 70.1
TWI32G0518 Tripterygium wilfordii HOM05D002170 ORTHO05D005003 3.3e-217 758.8 587 70.2
PSO782G3858 Papaver somniferum HOM05D002170 ORTHO05D005003 1.3e-216 756.9 601 70.0
Gorai.010G119500 Gossypium raimondii HOM05D002170 ORTHO05D005003 2.2e-216 756.1 583 73.9
Sabra06G0208300 Salix brachista HOM05D002170 ORTHO05D005003 4.8e-216 755.0 568 72.0
TPR.G6144 Trifolium pratense HOM05D002170 ORTHO05D005003 8.2e-216 754.2 589 69.4
TWI63G1817 Tripterygium wilfordii HOM05D002170 ORTHO05D005003 1.1e-215 753.8 587 70.4
Sc07g0003300 Simmondsia chinensis HOM05D002170 ORTHO05D005003 3.1e-215 752.3 585 69.9
Lj7A736G82 Lonicera japonica HOM05D002170 ORTHO05D005003 5.3e-215 751.5 564 71.1
Psat1g044520 Pisum sativum HOM05D002170 ORTHO05D005003 7.0e-215 751.1 590 68.5
Phvul.003G275100 Phaseolus vulgaris HOM05D002170 ORTHO05D005003 1.6e-214 750.0 591 68.9
Gohir.A06G109900 Gossypium hirsutum HOM05D002170 ORTHO05D005003 2.0e-214 749.6 560 75.7
CiPaw.08G005300 Carya illinoinensis HOM05D002170 ORTHO05D005003 2.7e-214 749.2 573 70.0
Ca_22544_v3 Cicer arietinum L. HOM05D002170 ORTHO05D005003 4.5e-214 748.4 591 68.9
ClCG08G013750 Citrullus lanatus HOM05D002170 ORTHO05D005003 4.5e-214 748.4 594 68.4
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 7.7e-214 747.7 589 71.1
CANSAT11G1789 Cannabis sativa HOM05D002170 ORTHO05D005003 1.0e-213 747.3 589 69.9
PSO063G0760 Papaver somniferum HOM05D002170 ORTHO05D005003 1.7e-213 746.5 601 69.1
VMungo0251G1008 Vigna mungo HOM05D002170 ORTHO05D005003 1.7e-213 746.5 590 68.8
Lalb_Chr05g0229031 Lupinus albus HOM05D002170 ORTHO05D005003 1.1e-212 743.8 591 68.4
DCAR_004512 Daucus carota HOM05D002170 ORTHO05D005003 2.5e-212 742.7 589 69.4
Medtr8g070490 Medicago truncatula HOM05D002170 ORTHO05D005003 2.5e-212 742.7 583 69.1
CsaV3_2G032530 Cucumis sativus L. HOM05D002170 ORTHO05D005003 3.2e-212 742.3 574 70.2
Glyma.16G095500 Glycine max HOM05D002170 ORTHO05D005003 3.2e-212 742.3 591 68.2
MELO3C011306.2 Cucumis melo HOM05D002170 ORTHO05D005003 5.5e-212 741.5 574 70.0
CSS0015318 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D005003 2.1e-211 739.6 583 69.3
Lalb_Chr09g0334601 Lupinus albus HOM05D002170 ORTHO05D005003 2.1e-211 739.6 590 68.3
Lj4g0016988 Lotus japonicus HOM05D002170 ORTHO05D005003 8.0e-211 737.6 590 68.0
Manes.16G131000 Manihot esculenta HOM05D002170 ORTHO05D005003 8.0e-211 737.6 570 69.6
FAN20G0658 Fragaria x ananassa HOM05D002170 ORTHO05D005003 2.0e-209 733.0 561 72.0
Gohir.A08G253000 Gossypium hirsutum HOM05D002170 ORTHO05D005003 2.6e-209 732.6 587 67.3
MSTRG.25828 Avicennia marina HOM05D002170 ORTHO05D005003 1.3e-208 730.3 587 67.1
Sed0020863 Sechium edule HOM05D002170 ORTHO05D005003 3.7e-208 728.8 566 69.4
Cc08_g07300 Coffea canephora HOM05D002170 ORTHO05D005003 4.8e-208 728.4 592 67.4
Glyma.08G265300 Glycine max HOM05D002170 ORTHO05D005003 6.3e-208 728.0 593 67.5
vmacro11266 Vaccinium macrocarpon HOM05D002170 ORTHO05D005003 9.1e-207 724.2 585 68.7
Eucgr.C04040 Eucalyptus grandis HOM05D002170 ORTHO05D005003 1.6e-206 723.4 591 67.0
Sed0005523 Sechium edule HOM05D002170 ORTHO05D005003 1.6e-206 723.4 571 69.0
SalBow4G1870 Salvia bowleyana HOM05D002170 ORTHO05D005003 3.5e-206 722.2 569 68.9
PGR044G1237 Punica granatum HOM05D002170 ORTHO05D005003 7.7e-206 721.1 560 68.6
Duzib150G1070 Durio zibethinus HOM05D002170 ORTHO05D005003 1.3e-205 720.3 584 69.7
Gohir.D08G274700 Gossypium hirsutum HOM05D002170 ORTHO05D005003 3.8e-205 718.8 587 67.0
Rhsim02G0216100 Rhododendron simsii HOM05D002170 ORTHO05D005003 6.5e-205 718.0 586 67.6
Gorai.004G293200 Gossypium raimondii HOM05D002170 ORTHO05D005003 1.1e-204 717.2 587 66.8
Oeu021911.1 Olea europaea HOM05D002170 ORTHO05D005003 9.5e-204 714.1 589 65.7
CAN.G546.1 Capsicum annuum HOM05D002170 ORTHO05D005003 3.6e-203 712.2 596 65.4
Aa31LG3G16300 Aethionema arabicum HOM05D002170 ORTHO05D005003 8.0e-203 711.1 598 64.9
vmacro16501 Vaccinium macrocarpon HOM05D002170 ORTHO05D005003 8.0e-203 711.1 569 67.7
Peaxi162Scf00227g00611 Petunia axillaris HOM05D002170 ORTHO05D005003 3.0e-202 709.1 587 66.3
Sopen03g004110 Solanum pennellii HOM05D002170 ORTHO05D005003 8.8e-202 707.6 587 65.4
Solyc03g025280.4 Solanum lycopersicum HOM05D002170 ORTHO05D005003 2.6e-201 706.1 587 65.4
EL10Ac7g17340 Beta vulgaris HOM05D002170 ORTHO05D005003 4.9e-200 701.8 596 65.9
Ah.15g090090 Amaranthus hybridus HOM05D002170 ORTHO05D005003 2.7e-198 696.0 592 65.0
SEGI_20387 Sequoiadendron giganteum HOM05D002170 ORTHO05D005003 2.7e-198 696.0 627 64.9
Nitab4.5_0001798g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 1.0e-197 694.1 565 66.7
Migut.E01450 Erythranthe guttata HOM05D002170 ORTHO05D005003 2.3e-197 693.0 591 63.3
Peaxi162Scf00688g00229 Petunia axillaris HOM05D002170 ORTHO05D005003 3.8e-197 692.2 587 64.9
Thhalv10003609m.g Eutrema salsugineum HOM05D002170 ORTHO05D005003 5.0e-197 691.8 602 63.1
Gohir.D06G104300 Gossypium hirsutum HOM05D002170 ORTHO05D005003 5.0e-197 691.8 512 76.8
Sp2g22460 Schrenkiella parvula HOM05D002170 ORTHO05D005003 6.6e-197 691.4 576 66.5
Sp6g32650 Schrenkiella parvula HOM05D002170 ORTHO05D005003 1.9e-196 689.9 567 67.7
AUR62040507 Chenopodium quinoa HOM05D002170 ORTHO05D005003 3.3e-196 689.1 584 64.4
CARHR188430 Cardamine hirsuta HOM05D002170 ORTHO05D005003 7.3e-196 688.0 584 67.6
Thhalv10012641m.g Eutrema salsugineum HOM05D002170 ORTHO05D005003 1.2e-195 687.2 563 66.6
AL6G36690 Arabidopsis lyrata HOM05D002170 ORTHO05D005003 1.6e-195 686.8 587 66.1
AT5G25060 Arabidopsis thaliana HOM05D002170 ORTHO05D005003 4.7e-195 685.3 583 66.2
AUR62042299 Chenopodium quinoa HOM05D002170 ORTHO05D005003 1.0e-194 684.1 563 66.1
AL6G21380 Arabidopsis lyrata HOM05D002170 ORTHO05D005003 1.4e-194 683.7 563 66.4
Zm00001eb234030 Zea mays HOM05D002170 ORTHO05D005003 8.9e-194 681.0 596 62.9
Zm00001eb233960 Zea mays HOM05D002170 ORTHO05D005003 1.5e-193 680.2 564 65.2
BcaB04g19807 Brassica carinata HOM05D002170 ORTHO05D005003 2.6e-193 679.5 603 63.3
Nitab4.5_0000927g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 3.4e-193 679.1 576 64.4
BcaC04g23569 Brassica carinata HOM05D002170 ORTHO05D005003 9.8e-193 677.6 598 63.9
Duzib168G2019 Durio zibethinus HOM05D002170 ORTHO05D005003 1.7e-192 676.8 584 65.6
Nitab4.5_0000748g0050 Nicotiana tabacum HOM05D002170 ORTHO05D005003 1.7e-192 676.8 565 65.1
BolC9t53617H Brassica oleracea HOM05D002170 ORTHO05D005003 2.2e-192 676.4 598 63.7
Carub.0006s2289 Capsella rubella HOM05D002170 ORTHO05D005003 8.3e-192 674.5 583 64.8
Oeu009655.1 Olea europaea HOM05D002170 ORTHO05D005003 3.2e-191 672.5 561 65.1
ECA240G4525 Erigeron canadensis HOM05D002170 ORTHO05D005003 1.6e-190 670.2 583 64.8
A09p06320 Brassica napus HOM05D002170 ORTHO05D005003 2.0e-190 669.8 599 63.3
BraA09t36277Z Brassica rapa HOM05D002170 ORTHO05D005003 2.0e-190 669.8 599 63.3
Actinidia14137 Actinidia chinensis HOM05D002170 ORTHO05D005003 3.9e-189 665.6 587 64.4
AT5G10800 Arabidopsis thaliana HOM05D002170 ORTHO05D005003 2.5e-188 662.9 578 63.5
Lsat_1_v5_gn_5_62020 Lactuca sativa HOM05D002170 ORTHO05D005003 3.3e-188 662.5 564 66.7
Atru.chr7.2551 Acer truncatum HOM05D002170 ORTHO05D005003 4.3e-188 662.1 392 86.0
Hund02267 Selenicereus undatus HOM05D002170 ORTHO05D005003 5.6e-188 661.8 586 63.8
unitig_0.g2818 Utricularia gibba HOM05D002170 ORTHO05D005003 3.6e-187 659.1 562 64.6
HanXRQChr13g0412271 Helianthus annuus HOM05D002170 ORTHO05D005003 2.6e-185 652.9 584 64.7
CARHR202490 Cardamine hirsuta HOM05D002170 ORTHO05D005003 3.4e-185 652.5 540 65.2
HanXRQChr03g0081441 Helianthus annuus HOM05D002170 ORTHO05D005003 1.9e-183 646.7 561 65.8
SGA_v2.0_scaffold165G38229 Striga asiatica HOM05D002170 ORTHO05D005003 1.5e-177 627.1 456 71.5
AagrBONN_evm.TU.Sc2ySwM_117.2284 Anthoceros agrestis HOM05D002170 ORTHO05D005003 1.9e-175 620.2 666 55.4
HanXRQChr03g0082661 Helianthus annuus HOM05D002170 ORTHO05D005003 2.4e-175 619.8 561 64.2
Carub.0006s0930 Capsella rubella HOM05D002170 ORTHO05D005003 2.7e-174 616.3 529 64.3
Pp3c23_11510 Physcomitrium patens HOM05D002170 ORTHO05D005003 1.0e-173 614.4 624 56.1
Pp3c24_10060 Physcomitrium patens HOM05D002170 ORTHO05D005003 4.9e-168 595.5 636 55.3
Pp3c24_10090 Physcomitrium patens HOM05D002170 ORTHO05D005003 4.9e-168 595.5 636 55.3
Duzib187G0716 Durio zibethinus HOM05D002170 ORTHO05D005003 8.1e-163 578.2 587 58.1
SMO347G0495 Selaginella moellendorffii HOM05D002170 ORTHO05D005003 5.4e-159 565.5 566 57.6
CBR_g26149 Chara braunii HOM05D002170 ORTHO05D005003 1.5e-145 520.8 669 49.2
Nitab4.5_0005295g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 3.8e-144 516.2 587 52.8
Nitab4.5_0001894g0050 Nicotiana tabacum HOM05D002170 ORTHO05D005003 9.3e-127 458.4 587 48.7
Mapoly0144s0002 Marchantia polymorpha HOM05D002170 ORTHO05D005003 5.0e-112 409.5 246 82.9
A06p35810 Brassica napus HOM05D002170 ORTHO05D005003 9.1e-90 335.5 405 52.3
Cre03.g158150 Chlamydomonas reinhardtii HOM05D002170 ORTHO05D005003 4.3e-79 300.1 358 45.8
BcaNung03197 Brassica carinata HOM05D002170 ORTHO05D005003 8.0e-78 295.8 168 85.1
Ah.01g016890 Amaranthus hybridus HOM05D002170 ORTHO05D005003 3.5e-73 280.4 168 79.8
BraA06t26506Z Brassica rapa HOM05D002170 ORTHO05D005003 4.0e-69 266.9 438 44.1
Mapoly4108s0001 Marchantia polymorpha HOM05D002170 ORTHO05D005003 2.4e-66 257.7 198 68.7
MCO02G189 Micromonas commoda HOM05D002170 ORTHO05D005003 7.3e-63 246.1 269 48.3
Sopen08g020540 Solanum pennellii HOM05D002170 ORTHO05D005003 2.4e-37 161.4 93 80.6
Actinidia23116 Actinidia chinensis HOM05D002170 ORTHO05D005003 6.9e-29 133.3 122 63.1
PRCOL_00001332 Prasinoderma coloniale HOM05D002170 ORTHO05D005003 9.0e-29 132.9 283 32.5
C09p07010 Brassica napus HOM05D002170 ORTHO05D005003 1.9e-23 115.2 250 37.2
vmacro04764 Vaccinium macrocarpon HOM05D002170 ORTHO05D005003 7.1e-18 96.7 86 67.4
Nn2g15151 Nelumbo nucifera HOM05D002170 ORTHO05D005003 1.4e-13 82.4 48 83.3
PGSC0003DMG400032500 Solanum tuberosum HOM05D002170 ORTHO05D005003 6.9e-13 80.1 67 61.2
Atru.chr7.2550 Acer truncatum HOM05D002170 ORTHO05D005003 4.6e-09 67.4 55 63.6
Mapoly0144s0001 Marchantia polymorpha HOM05D002170 ORTHO05D005003 1.5e-07 62.4 95 45.3
FAN20G1225 Fragaria x ananassa HOM05D002170 ORTHO05D005003 2.5e-07 61.6 33 84.8
Sc13g0005370 Simmondsia chinensis HOM05D002170 ORTHO05D005003 2.5e-07 61.6 49 63.3
Mapoly0184s0028 Marchantia polymorpha HOM05D002170 ORTHO05D005003 2.2e-06 58.5 175 30.3


User provided reference genes

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