Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3243 Ceratophyllum demersum HOM05D001053 ORTHO05D007087 1.8e-101 372.5 178 100.0
TWI81G0178 Tripterygium wilfordii HOM05D001053 ORTHO05D007087 4.4e-18 95.5 64 60.9
Atru.chr4.2606 Acer truncatum HOM05D001053 ORTHO05D007087 1.3e-17 94.0 66 60.6
Manes.01G020400 Manihot esculenta HOM05D001053 ORTHO05D007087 2.2e-17 93.2 101 45.5
Atru.chr4.2605 Acer truncatum HOM05D001053 ORTHO05D007087 2.8e-17 92.8 66 59.1
Thecc.03G028900 Theobroma cacao HOM05D001053 ORTHO05D007087 8.2e-17 91.3 159 39.0
QL10p022503 Quercus lobata HOM05D001053 ORTHO05D007087 2.4e-16 89.7 77 50.6
Gorai.008G285500 Gossypium raimondii HOM05D001053 ORTHO05D007087 4.1e-16 89.0 153 37.3
Peaxi162Scf00015g00729 Petunia axillaris HOM05D001053 ORTHO05D007087 4.1e-16 89.0 110 41.8
Gohir.A12G265600 Gossypium hirsutum HOM05D001053 ORTHO05D007087 1.5e-15 87.0 153 36.6
Lj5A145G38 Lonicera japonica HOM05D001053 ORTHO05D007087 1.5e-15 87.0 126 37.3
MD14G1222300 Malus domestica HOM05D001053 ORTHO05D007087 1.5e-15 87.0 73 52.1
CANSAT80G1114 Cannabis sativa HOM05D001053 ORTHO05D007087 2.0e-15 86.7 62 54.8
Gohir.D12G265800 Gossypium hirsutum HOM05D001053 ORTHO05D007087 2.6e-15 86.3 153 36.6
Sc10g0009540 Simmondsia chinensis HOM05D001053 ORTHO05D007087 2.6e-15 86.3 109 42.2
PGSC0003DMG400005706 Solanum tuberosum HOM05D001053 ORTHO05D007087 1.0e-14 84.3 86 41.9
TAR622G0805 Trochodendron aralioides HOM05D001053 ORTHO05D007087 1.0e-14 84.3 78 51.3
Nn4g23728 Nelumbo nucifera HOM05D001053 ORTHO05D007087 1.3e-14 84.0 68 51.5
ATR0115G004 Amborella trichopoda HOM05D001053 ORTHO05D007087 1.7e-14 83.6 72 51.4
EL10Ac5g11255 Beta vulgaris HOM05D001053 ORTHO05D007087 1.7e-14 83.6 97 44.3
Sopen03g038580 Solanum pennellii HOM05D001053 ORTHO05D007087 1.7e-14 83.6 86 40.7
PGR083G1355 Punica granatum HOM05D001053 ORTHO05D007087 2.2e-14 83.2 141 37.6
MD06G1211800 Malus domestica HOM05D001053 ORTHO05D007087 3.8e-14 82.4 73 52.1
Solyc03g119730.3 Solanum lycopersicum HOM05D001053 ORTHO05D007087 3.8e-14 82.4 86 40.7
Cc04_g07470 Coffea canephora HOM05D001053 ORTHO05D007087 6.5e-14 81.6 86 39.5
RcHm_v2.0_Chr7g0184671 Rosa chinensis HOM05D001053 ORTHO05D007087 6.5e-14 81.6 93 44.1
Aqoxy3G00397 Aquilegia oxysepala HOM05D001053 ORTHO05D007087 8.5e-14 81.3 98 48.0
CiPaw.15G127300 Carya illinoinensis HOM05D001053 ORTHO05D007087 8.5e-14 81.3 68 52.9
Nitab4.5_0001599g0120 Nicotiana tabacum HOM05D001053 ORTHO05D007087 1.1e-13 80.9 101 39.6
Nitab4.5_0000410g0030 Nicotiana tabacum HOM05D001053 ORTHO05D007087 1.4e-13 80.5 101 38.6
Sabra12G0043500 Salix brachista HOM05D001053 ORTHO05D007087 1.4e-13 80.5 70 54.3
Ciclev10019370m.g Citrus clementina HOM05D001053 ORTHO05D007087 1.9e-13 80.1 104 40.4
Potri.012G060400 Populus trichocarpa HOM05D001053 ORTHO05D007087 1.9e-13 80.1 65 55.4
Actinidia31025 Actinidia chinensis HOM05D001053 ORTHO05D007087 3.2e-13 79.3 82 47.6
vmacro17672 Vaccinium macrocarpon HOM05D001053 ORTHO05D007087 4.2e-13 79.0 64 54.7
Duzib205G1271 Durio zibethinus HOM05D001053 ORTHO05D007087 5.5e-13 78.6 81 46.9
PSO017G2978 Papaver somniferum HOM05D001053 ORTHO05D007087 5.5e-13 78.6 50 58.0
PSO478G0818 Papaver somniferum HOM05D001053 ORTHO05D007087 5.5e-13 78.6 50 58.0
HPP92_013948 Vanilla planifolia HOM05D001053 ORTHO05D007087 5.5e-13 78.6 68 54.4
Eucgr.B00702 Eucalyptus grandis HOM05D001053 ORTHO05D007087 9.4e-13 77.8 80 46.2
Lsat_1_v5_gn_1_63480 Lactuca sativa HOM05D001053 ORTHO05D007087 9.4e-13 77.8 69 52.2
Lsat_1_v5_gn_4_115781 Lactuca sativa HOM05D001053 ORTHO05D007087 9.4e-13 77.8 69 52.2
FAN08G3403 Fragaria x ananassa HOM05D001053 ORTHO05D007087 2.1e-12 76.6 98 42.9
FAN18G3757 Fragaria x ananassa HOM05D001053 ORTHO05D007087 2.1e-12 76.6 98 42.9
FvH4_5g12660 Fragaria vesca HOM05D001053 ORTHO05D007087 4.7e-12 75.5 149 31.5
FAN04G2323 Fragaria x ananassa HOM05D001053 ORTHO05D007087 4.7e-12 75.5 149 31.5
FAN13G1473 Fragaria x ananassa HOM05D001053 ORTHO05D007087 4.7e-12 75.5 149 31.5
FAN18G2590 Fragaria x ananassa HOM05D001053 ORTHO05D007087 4.7e-12 75.5 149 31.5
Cpa.g.sc13.45 Carica papaya HOM05D001053 ORTHO05D007087 8.0e-12 74.7 164 32.3
Phvul.003G176700 Phaseolus vulgaris HOM05D001053 ORTHO05D007087 8.0e-12 74.7 93 46.2
SEGI_15820 Sequoiadendron giganteum HOM05D001053 ORTHO05D007087 8.0e-12 74.7 147 32.7
Glyma.17G120900 Glycine max HOM05D001053 ORTHO05D007087 1.0e-11 74.3 125 38.4
VMungo1215G0938 Vigna mungo HOM05D001053 ORTHO05D007087 1.8e-11 73.6 88 43.2
arahy.Tifrunner.gnm1.ann1.YD5ENU Arachis hypogaea HOM05D001053 ORTHO05D007087 2.3e-11 73.2 72 54.2
CSS0027606 Camellia sinensis var. sinensis HOM05D001053 ORTHO05D007087 2.3e-11 73.2 77 45.5
Glyma.05G012850 Glycine max HOM05D001053 ORTHO05D007087 3.0e-11 72.8 129 36.4
HanXRQChr09g0269881 Helianthus annuus HOM05D001053 ORTHO05D007087 3.9e-11 72.4 63 46.0
CAN.G438.119 Capsicum annuum HOM05D001053 ORTHO05D007087 1.1e-10 70.9 51 51.0
DCAR_023185 Daucus carota HOM05D001053 ORTHO05D007087 1.1e-10 70.9 83 44.6
Dinv40429 Davidia involucrata HOM05D001053 ORTHO05D007087 1.1e-10 70.9 97 42.3
ECA232G0502 Erigeron canadensis HOM05D001053 ORTHO05D007087 1.1e-10 70.9 140 30.0
MBI13_g29986_MAGBIO Magnolia biondii HOM05D001053 ORTHO05D007087 1.5e-10 70.5 119 41.2
Hma1.2p1_0340F.1_g129850 Hydrangea macrophylla HOM05D001053 ORTHO05D007087 2.6e-10 69.7 100 39.0
Lalb_Chr13g0302311 Lupinus albus HOM05D001053 ORTHO05D007087 2.6e-10 69.7 69 47.8
THA.LOC104820404 Tarenaya hassleriana HOM05D001053 ORTHO05D007087 3.3e-10 69.3 49 59.2
SGA_v2.0_scaffold171G38938 Striga asiatica HOM05D001053 ORTHO05D007087 4.4e-10 68.9 94 38.3
Sed0003489 Sechium edule HOM05D001053 ORTHO05D007087 7.4e-10 68.2 84 39.3
MELO3C015103.2 Cucumis melo HOM05D001053 ORTHO05D007087 1.3e-09 67.4 84 41.7
COL.COLO4_22724 Corchorus olitorius HOM05D001053 ORTHO05D007087 1.7e-09 67.0 151 32.5
CsaV3_1G043530 Cucumis sativus L. HOM05D001053 ORTHO05D007087 4.8e-09 65.5 80 43.8
Lalb_Chr07g0178611 Lupinus albus HOM05D001053 ORTHO05D007087 8.2e-09 64.7 78 41.0
unitig_46.g18490 Utricularia gibba HOM05D001053 ORTHO05D007087 1.1e-08 64.3 71 45.1
Carub.0003s1831 Capsella rubella HOM05D001053 ORTHO05D007087 1.8e-08 63.5 57 54.4
Os07g0164100 Oryza sativa ssp. japonica HOM05D001053 ORTHO05D007087 2.4e-08 63.2 96 34.4
Medtr4g111985 Medicago truncatula HOM05D001053 ORTHO05D007087 3.1e-08 62.8 136 32.4
Thhalv10020421m.g Eutrema salsugineum HOM05D001053 ORTHO05D007087 5.3e-08 62.0 48 54.2
CARHR093900 Cardamine hirsuta HOM05D001053 ORTHO05D007087 7.0e-08 61.6 49 57.1
Psat4g043200 Pisum sativum HOM05D001053 ORTHO05D007087 7.0e-08 61.6 99 35.4
GSVIVG01008242001 Vitis vinifera HOM05D001053 ORTHO05D007087 7.0e-08 61.6 85 38.8
MSTRG.9271 Avicennia marina HOM05D001053 ORTHO05D007087 9.1e-08 61.2 52 55.8
Sp3g16610 Schrenkiella parvula HOM05D001053 ORTHO05D007087 2.0e-07 60.1 49 57.1
Aa31LG8G5390 Aethionema arabicum HOM05D001053 ORTHO05D007087 2.6e-07 59.7 57 52.6
Ca_02540_v3 Cicer arietinum L. HOM05D001053 ORTHO05D007087 4.5e-07 58.9 73 42.5
Cfa019809 Carpinus fangiana HOM05D001053 ORTHO05D007087 7.7e-07 58.2 119 31.1
Mapoly0001s0348 Marchantia polymorpha HOM05D001053 ORTHO05D007087 1.0e-06 57.8 81 37.0
SMO356G0044 Selaginella moellendorffii HOM05D001053 ORTHO05D007087 8.5e-06 54.7 53 39.6


User provided reference genes

Program Settings