Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3237 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 1.6e-241 839.0 421 100.0
CDE04G1187 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 2.0e-170 602.8 523 64.2
TAR636G1320 Trochodendron aralioides HOM05D005801 ORTHO05D008555 5.6e-56 222.6 492 35.2
AUR62021403 Chenopodium quinoa HOM05D005801 ORTHO05D008555 1.6e-55 221.1 455 37.4
COL.COLO4_34743 Corchorus olitorius HOM05D005801 ORTHO05D008555 1.6e-55 221.1 413 38.0
AUR62010892 Chenopodium quinoa HOM05D005801 ORTHO05D008555 1.4e-54 218.0 465 36.6
vmacro06253 Vaccinium macrocarpon HOM05D005801 ORTHO05D008555 1.8e-54 217.6 541 33.3
Duzib150G1339 Durio zibethinus HOM05D005801 ORTHO05D008555 8.9e-54 215.3 487 34.7
CSS0008146 Camellia sinensis var. sinensis HOM05D005801 ORTHO05D008555 3.4e-53 213.4 504 32.5
Thecc.09G100600 Theobroma cacao HOM05D005801 ORTHO05D008555 7.5e-53 212.2 450 35.1
TWI63G0976 Tripterygium wilfordii HOM05D005801 ORTHO05D008555 1.7e-52 211.1 505 35.0
Ciclev10007826m.g Citrus clementina HOM05D005801 ORTHO05D008555 1.9e-51 207.6 161 69.6
Gohir.A07G009500 Gossypium hirsutum HOM05D005801 ORTHO05D008555 3.2e-51 206.8 502 34.7
Gohir.D07G009800 Gossypium hirsutum HOM05D005801 ORTHO05D008555 4.1e-51 206.5 506 35.6
Gorai.001G010100 Gossypium raimondii HOM05D005801 ORTHO05D008555 1.6e-50 204.5 506 35.2
PSO063G7511 Papaver somniferum HOM05D005801 ORTHO05D008555 2.7e-50 203.8 169 66.3
FAN19G1715 Fragaria x ananassa HOM05D005801 ORTHO05D008555 3.5e-50 203.4 158 70.9
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 4.6e-50 203.0 559 32.2
Duzib132G0722 Durio zibethinus HOM05D005801 ORTHO05D008555 6.0e-50 202.6 470 35.3
Ca_17365_v3 Cicer arietinum L. HOM05D005801 ORTHO05D008555 7.8e-50 202.2 501 33.1
FvH4_1g06150 Fragaria vesca HOM05D005801 ORTHO05D008555 7.8e-50 202.2 158 70.9
Potri.018G087800 Populus trichocarpa HOM05D005801 ORTHO05D008555 1.0e-49 201.8 372 38.2
Prupe.7G219800 Prunus persica HOM05D005801 ORTHO05D008555 1.3e-49 201.4 496 34.1
Rhsim03G0236600 Rhododendron simsii HOM05D005801 ORTHO05D008555 1.3e-49 201.4 482 33.0
Cfa003179 Carpinus fangiana HOM05D005801 ORTHO05D008555 1.7e-49 201.1 451 33.7
FAN23G0343 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.7e-49 201.1 158 70.3
MD15G1196600 Malus domestica HOM05D005801 ORTHO05D008555 1.7e-49 201.1 162 68.5
PSO832G4312 Papaver somniferum HOM05D005801 ORTHO05D008555 2.3e-49 200.7 151 70.9
Sabra18G0076100 Salix brachista HOM05D005801 ORTHO05D008555 2.3e-49 200.7 157 68.8
Eucgr.C00997 Eucalyptus grandis HOM05D005801 ORTHO05D008555 3.0e-49 200.3 469 35.2
Phvul.002G308600 Phaseolus vulgaris HOM05D005801 ORTHO05D008555 3.0e-49 200.3 472 34.1
arahy.Tifrunner.gnm1.ann1.BF4XTR Arachis hypogaea HOM05D005801 ORTHO05D008555 3.9e-49 199.9 468 34.0
FAN26G1273 Fragaria x ananassa HOM05D005801 ORTHO05D008555 3.9e-49 199.9 153 71.2
Os01g0742000 Oryza sativa ssp. japonica HOM05D005801 ORTHO05D008555 3.9e-49 199.9 164 64.6
Cc06_g10480 Coffea canephora HOM05D005801 ORTHO05D008555 5.1e-49 199.5 515 32.4
MD02G1065700 Malus domestica HOM05D005801 ORTHO05D008555 6.6e-49 199.1 364 38.5
CiPaw.04G157900 Carya illinoinensis HOM05D005801 ORTHO05D008555 8.6e-49 198.7 488 34.2
FAN26G1315 Fragaria x ananassa HOM05D005801 ORTHO05D008555 8.6e-49 198.7 343 38.8
Lj4P387T11 Lonicera japonica HOM05D005801 ORTHO05D008555 1.1e-48 198.4 460 34.6
QL02p041581 Quercus lobata HOM05D005801 ORTHO05D008555 1.5e-48 198.0 484 34.7
FAN19G0317 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.9e-48 197.6 158 69.0
Cpa.g.sc40.94 Carica papaya HOM05D005801 ORTHO05D008555 2.5e-48 197.2 157 68.2
DCAR_028663 Daucus carota HOM05D005801 ORTHO05D008555 2.5e-48 197.2 149 69.1
Aqoxy7G01401 Aquilegia oxysepala HOM05D005801 ORTHO05D008555 4.3e-48 196.4 546 31.3
Nitab4.5_0001703g0010 Nicotiana tabacum HOM05D005801 ORTHO05D008555 4.3e-48 196.4 529 31.9
Manes.16G108700 Manihot esculenta HOM05D005801 ORTHO05D008555 5.6e-48 196.1 571 30.5
RcHm_v2.0_Chr2g0091911 Rosa chinensis HOM05D005801 ORTHO05D008555 9.5e-48 195.3 507 32.5
Nitab4.5_0000066g0110 Nicotiana tabacum HOM05D005801 ORTHO05D008555 1.2e-47 194.9 501 32.5
CAN.G370.29 Capsicum annuum HOM05D005801 ORTHO05D008555 1.6e-47 194.5 147 68.7
EL10Ac8g18377 Beta vulgaris HOM05D005801 ORTHO05D008555 2.1e-47 194.1 151 66.9
CANSAT21G1751 Cannabis sativa HOM05D005801 ORTHO05D008555 2.1e-47 194.1 527 31.5
Psat7g016720 Pisum sativum HOM05D005801 ORTHO05D008555 2.1e-47 194.1 147 69.4
VMungo0251G1949 Vigna mungo HOM05D005801 ORTHO05D008555 2.8e-47 193.7 519 33.5
Zm00001eb371210 Zea mays HOM05D005801 ORTHO05D008555 2.8e-47 193.7 159 63.5
FAN28G2516 Fragaria x ananassa HOM05D005801 ORTHO05D008555 4.7e-47 193.0 540 31.3
Oeu053186.1 Olea europaea HOM05D005801 ORTHO05D008555 4.7e-47 193.0 367 37.1
SalBow1G2797 Salvia bowleyana HOM05D005801 ORTHO05D008555 6.2e-47 192.6 471 33.3
Migut.K00541 Erythranthe guttata HOM05D005801 ORTHO05D008555 8.1e-47 192.2 149 68.5
Lj4g0016627 Lotus japonicus HOM05D005801 ORTHO05D008555 8.1e-47 192.2 147 68.0
CsaV3_1G039790 Cucumis sativus L. HOM05D005801 ORTHO05D008555 1.4e-46 191.4 477 32.7
Sopen05g014540 Solanum pennellii HOM05D005801 ORTHO05D008555 2.4e-46 190.7 376 37.2
HPP92_009088 Vanilla planifolia HOM05D005801 ORTHO05D008555 3.1e-46 190.3 468 32.5
Lalb_Chr05g0223241 Lupinus albus HOM05D005801 ORTHO05D008555 4.0e-46 189.9 480 33.1
MSTRG.10602 Avicennia marina HOM05D005801 ORTHO05D008555 5.2e-46 189.5 471 34.4
MELO3C015412.2 Cucumis melo HOM05D005801 ORTHO05D008555 5.2e-46 189.5 467 33.2
Medtr8g102480 Medicago truncatula HOM05D005801 ORTHO05D008555 5.2e-46 189.5 148 68.2
Peaxi162Scf00720g00044 Petunia axillaris HOM05D005801 ORTHO05D008555 5.2e-46 189.5 500 30.0
Sc18g0001500 Simmondsia chinensis HOM05D005801 ORTHO05D008555 6.8e-46 189.1 146 67.8
Glyma.08G033500 Glycine max HOM05D005801 ORTHO05D008555 8.9e-46 188.7 464 33.0
PGSC0003DMG400038162 Solanum tuberosum HOM05D005801 ORTHO05D008555 1.5e-45 188.0 376 36.7
ATR0681G166 Amborella trichopoda HOM05D005801 ORTHO05D008555 2.6e-45 187.2 161 63.4
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 7.6e-45 185.7 159 65.4
ECA234G2262 Erigeron canadensis HOM05D005801 ORTHO05D008555 9.9e-45 185.3 147 69.4
SGA_v2.0_scaffold129G34141 Striga asiatica HOM05D005801 ORTHO05D008555 9.9e-45 185.3 493 32.3
Dinv36686 Davidia involucrata HOM05D005801 ORTHO05D008555 6.4e-44 182.6 515 32.0
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 6.4e-44 182.6 148 67.6
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 6.4e-44 182.6 148 67.6
AL3G48350 Arabidopsis lyrata HOM05D005801 ORTHO05D008555 8.4e-44 182.2 147 65.3
Sed0027809 Sechium edule HOM05D005801 ORTHO05D008555 8.4e-44 182.2 156 64.7
AT2G19870 Arabidopsis thaliana HOM05D005801 ORTHO05D008555 1.1e-43 181.8 147 66.0
BcaB03g16775 Brassica carinata HOM05D005801 ORTHO05D008555 1.1e-43 181.8 147 63.3
BcaC06g36648 Brassica carinata HOM05D005801 ORTHO05D008555 1.1e-43 181.8 147 63.3
BolC7t40588H Brassica oleracea HOM05D005801 ORTHO05D008555 1.1e-43 181.8 147 63.3
BraA07t27882Z Brassica rapa HOM05D005801 ORTHO05D008555 1.1e-43 181.8 147 63.3
Carub.0003s3414 Capsella rubella HOM05D005801 ORTHO05D008555 1.4e-43 181.4 147 65.3
THA.LOC104814572 Tarenaya hassleriana HOM05D005801 ORTHO05D008555 2.4e-43 180.6 463 32.6
C07p01810 Brassica napus HOM05D005801 ORTHO05D008555 3.2e-43 180.3 147 63.3
A07p00840 Brassica napus HOM05D005801 ORTHO05D008555 4.2e-43 179.9 147 62.6
MBI04_g34406_MAGBIO Magnolia biondii HOM05D005801 ORTHO05D008555 7.1e-43 179.1 142 67.6
CARHR110310 Cardamine hirsuta HOM05D005801 ORTHO05D008555 9.2e-43 178.7 147 64.6
HanXRQChr10g0318931 Helianthus annuus HOM05D005801 ORTHO05D008555 9.2e-43 178.7 148 66.2
Thhalv10002296m.g Eutrema salsugineum HOM05D005801 ORTHO05D008555 1.2e-42 178.3 146 65.1
Sp3g33210 Schrenkiella parvula HOM05D005801 ORTHO05D008555 1.2e-42 178.3 147 63.9
unitig_46.g18397 Utricularia gibba HOM05D005801 ORTHO05D008555 2.7e-42 177.2 389 35.0
Actinidia32650 Actinidia chinensis HOM05D005801 ORTHO05D008555 3.5e-42 176.8 139 66.9
SHI02689 Sapria himalayana HOM05D005801 ORTHO05D008555 3.0e-41 173.7 151 63.6
Solyc05g017990.4 Solanum lycopersicum HOM05D005801 ORTHO05D008555 3.0e-41 173.7 403 35.0
Aa31LG8G16820 Aethionema arabicum HOM05D005801 ORTHO05D008555 4.3e-40 169.9 147 61.2
FvH4_1g06190 Fragaria vesca HOM05D005801 ORTHO05D008555 8.4e-36 155.6 91 86.8
Lalb_Chr09g0331541 Lupinus albus HOM05D005801 ORTHO05D008555 5.1e-33 146.4 160 55.6
Pp3c17_17180 Physcomitrium patens HOM05D005801 ORTHO05D008555 3.3e-32 143.7 159 46.5
Mapoly0135s0034 Marchantia polymorpha HOM05D005801 ORTHO05D008555 1.2e-29 135.2 167 46.1
Lj6C67T4 Lonicera japonica HOM05D005801 ORTHO05D008555 9.9e-29 132.1 119 58.8
SMO367G0373 Selaginella moellendorffii HOM05D005801 ORTHO05D008555 3.9e-25 120.2 144 49.3
CBR_g20364 Chara braunii HOM05D005801 ORTHO05D008555 8.7e-25 119.0 145 44.8
MCO03G539 Micromonas commoda HOM05D005801 ORTHO05D008555 5.1e-17 93.2 145 41.4
PRCOL_00003145 Prasinoderma coloniale HOM05D005801 ORTHO05D008555 2.5e-16 90.9 152 39.5
CAN.G640.23 Capsicum annuum HOM05D005801 ORTHO05D008555 4.3e-16 90.1 128 47.7
EL10Ac8g19871 Beta vulgaris HOM05D005801 ORTHO05D008555 1.4e-14 85.1 98 49.0
Cre13.g566150 Chlamydomonas reinhardtii HOM05D005801 ORTHO05D008555 9.0e-14 82.4 159 34.0
CAN.G1277.2 Capsicum annuum HOM05D005801 ORTHO05D008555 6.7e-09 66.2 139 36.7
CAN.G775.15 Capsicum annuum HOM05D005801 ORTHO05D008555 1.8e-06 58.2 82 45.1


User provided reference genes

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