Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2463 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 3.3e-181 638.3 322 100.0
CDE04G0726 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 7.6e-130 467.6 262 89.7
CDE02G0470 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 1.6e-111 406.8 266 80.8
CANSAT35G0441 Cannabis sativa HOM05D004147 ORTHO05D005606 3.0e-110 402.5 264 74.6
MD03G1000100 Malus domestica HOM05D004147 ORTHO05D005606 5.7e-109 398.3 264 73.5
MD11G1000500 Malus domestica HOM05D004147 ORTHO05D005606 3.7e-108 395.6 264 73.9
Thecc.09G206400 Theobroma cacao HOM05D004147 ORTHO05D005606 3.7e-108 395.6 264 73.1
TAR633G2501 Trochodendron aralioides HOM05D004147 ORTHO05D005606 6.3e-108 394.8 264 73.9
QL01p007763 Quercus lobata HOM05D004147 ORTHO05D005606 1.4e-107 393.7 263 72.6
Ca_18795_v3 Cicer arietinum L. HOM05D004147 ORTHO05D005606 1.8e-107 393.3 264 72.3
Nn2g15911 Nelumbo nucifera HOM05D004147 ORTHO05D005606 1.8e-107 393.3 264 73.5
COL.COLO4_35060 Corchorus olitorius HOM05D004147 ORTHO05D005606 2.4e-107 392.9 264 72.7
Glyma.07G225200 Glycine max HOM05D004147 ORTHO05D005606 2.4e-107 392.9 264 72.7
Prupe.6G000600 Prunus persica HOM05D004147 ORTHO05D005606 2.4e-107 392.9 265 73.2
TPR.G34051 Trifolium pratense HOM05D004147 ORTHO05D005606 4.1e-107 392.1 264 73.1
TAR623G0988 Trochodendron aralioides HOM05D004147 ORTHO05D005606 5.3e-107 391.7 264 72.3
MBI19_g24069_MAGBIO Magnolia biondii HOM05D004147 ORTHO05D005606 6.9e-107 391.3 262 72.9
Dinv09765 Davidia involucrata HOM05D004147 ORTHO05D005606 9.1e-107 391.0 264 73.1
FvH4_3g46070 Fragaria vesca HOM05D004147 ORTHO05D005606 1.2e-106 390.6 265 72.5
CiPaw.13G180000 Carya illinoinensis HOM05D004147 ORTHO05D005606 1.5e-106 390.2 264 73.1
Glyma.20G025100 Glycine max HOM05D004147 ORTHO05D005606 2.0e-106 389.8 264 72.3
Phvul.002G101600 Phaseolus vulgaris HOM05D004147 ORTHO05D005606 2.0e-106 389.8 264 72.3
Duzib150G1508 Durio zibethinus HOM05D004147 ORTHO05D005606 2.6e-106 389.4 264 72.7
VMungo0251G0902 Vigna mungo HOM05D004147 ORTHO05D005606 2.6e-106 389.4 264 72.3
Ciclev10016090m.g Citrus clementina HOM05D004147 ORTHO05D005606 3.4e-106 389.0 264 72.0
Dinv06248 Davidia involucrata HOM05D004147 ORTHO05D005606 3.4e-106 389.0 264 72.7
Dinv15522 Davidia involucrata HOM05D004147 ORTHO05D005606 3.4e-106 389.0 264 72.7
MSTRG.19397 Avicennia marina HOM05D004147 ORTHO05D005606 4.5e-106 388.7 262 72.9
CSS0011494 Camellia sinensis var. sinensis HOM05D004147 ORTHO05D005606 4.5e-106 388.7 266 72.6
Atru.chr3.2044 Acer truncatum HOM05D004147 ORTHO05D005606 7.7e-106 387.9 266 72.2
PGR102G2115 Punica granatum HOM05D004147 ORTHO05D005606 1.0e-105 387.5 264 70.8
Gohir.A05G000500 Gossypium hirsutum HOM05D004147 ORTHO05D005606 1.3e-105 387.1 264 71.6
Gohir.D05G000800 Gossypium hirsutum HOM05D004147 ORTHO05D005606 1.7e-105 386.7 264 71.6
Lj4g0017588 Lotus japonicus HOM05D004147 ORTHO05D005606 1.7e-105 386.7 265 72.1
Sopen01g025520 Solanum pennellii HOM05D004147 ORTHO05D005606 2.2e-105 386.3 264 72.3
Potri.003G224000 Populus trichocarpa HOM05D004147 ORTHO05D005606 2.9e-105 386.0 266 71.4
TWI32G0854 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 2.9e-105 386.0 262 71.8
CsaV3_1G041490 Cucumis sativus L. HOM05D004147 ORTHO05D005606 3.8e-105 385.6 264 71.6
Lalb_Chr09g0328961 Lupinus albus HOM05D004147 ORTHO05D005606 5.0e-105 385.2 264 72.7
Oeu023957.1 Olea europaea HOM05D004147 ORTHO05D005606 5.0e-105 385.2 264 70.8
Migut.N00528 Erythranthe guttata HOM05D004147 ORTHO05D005606 6.5e-105 384.8 264 71.6
MELO3C015560.2 Cucumis melo HOM05D004147 ORTHO05D005606 8.5e-105 384.4 264 71.2
Sc09g0002150 Simmondsia chinensis HOM05D004147 ORTHO05D005606 1.4e-104 383.6 265 71.3
Gohir.D03G147100 Gossypium hirsutum HOM05D004147 ORTHO05D005606 1.9e-104 383.3 264 71.2
Medtr4g083230 Medicago truncatula HOM05D004147 ORTHO05D005606 1.9e-104 383.3 264 71.6
Hund19733 Selenicereus undatus HOM05D004147 ORTHO05D005606 1.9e-104 383.3 265 70.2
TWI34G0273 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 2.5e-104 382.9 262 71.4
MSTRG.5958 Avicennia marina HOM05D004147 ORTHO05D005606 3.2e-104 382.5 263 71.5
Cpa.g.sc119.7 Carica papaya HOM05D004147 ORTHO05D005606 5.5e-104 381.7 264 70.5
Duzib170G0806 Durio zibethinus HOM05D004147 ORTHO05D005606 9.4e-104 380.9 263 71.1
AUR62040894 Chenopodium quinoa HOM05D004147 ORTHO05D005606 1.2e-103 380.6 265 69.8
Gohir.A03G021600 Gossypium hirsutum HOM05D004147 ORTHO05D005606 1.2e-103 380.6 265 71.3
Lalb_Chr16g0385471 Lupinus albus HOM05D004147 ORTHO05D005606 1.2e-103 380.6 264 70.8
TWI60G0666 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 1.6e-103 380.2 262 70.2
CDE09G0171 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 2.7e-103 379.4 255 71.8
FAN11G3393 Fragaria x ananassa HOM05D004147 ORTHO05D005606 2.7e-103 379.4 291 66.3
HPP92_018009 Vanilla planifolia HOM05D004147 ORTHO05D005606 7.9e-103 377.9 266 70.7
CARHR125880 Cardamine hirsuta HOM05D004147 ORTHO05D005606 1.4e-102 377.1 264 68.2
Gorai.003G154600 Gossypium raimondii HOM05D004147 ORTHO05D005606 1.4e-102 377.1 265 70.6
Aqoxy2G00002 Aquilegia oxysepala HOM05D004147 ORTHO05D005606 1.8e-102 376.7 281 68.3
Zm00001eb333400 Zea mays HOM05D004147 ORTHO05D005606 3.0e-102 375.9 268 71.3
arahy.Tifrunner.gnm1.ann1.41N8FB Arachis hypogaea HOM05D004147 ORTHO05D005606 5.1e-102 375.2 264 69.7
arahy.Tifrunner.gnm1.ann1.JJ8YPF Arachis hypogaea HOM05D004147 ORTHO05D005606 5.1e-102 375.2 264 69.7
Os01g0260700 Oryza sativa ssp. japonica HOM05D004147 ORTHO05D005606 6.7e-102 374.8 268 71.3
Potri.001G000700 Populus trichocarpa HOM05D004147 ORTHO05D005606 6.7e-102 374.8 267 69.7
Thhalv10017021m.g Eutrema salsugineum HOM05D004147 ORTHO05D005606 8.8e-102 374.4 264 68.6
FAN16G1044 Fragaria x ananassa HOM05D004147 ORTHO05D005606 1.1e-101 374.0 296 64.9
PSO384G4999 Papaver somniferum HOM05D004147 ORTHO05D005606 1.5e-101 373.6 260 71.9
Sp4g14490 Schrenkiella parvula HOM05D004147 ORTHO05D005606 1.5e-101 373.6 264 67.8
Zm00001eb127970 Zea mays HOM05D004147 ORTHO05D005606 1.5e-101 373.6 268 70.9
PSO339G2679 Papaver somniferum HOM05D004147 ORTHO05D005606 2.6e-101 372.9 260 71.5
CAN.G1941.2 Capsicum annuum HOM05D004147 ORTHO05D005606 3.3e-101 372.5 264 70.8
PSO541G5718 Papaver somniferum HOM05D004147 ORTHO05D005606 5.7e-101 371.7 268 69.4
ECA238G2098 Erigeron canadensis HOM05D004147 ORTHO05D005606 7.4e-101 371.3 273 69.2
DCAR_001959 Daucus carota HOM05D004147 ORTHO05D005606 9.7e-101 370.9 264 68.2
Carub.0004s1343 Capsella rubella HOM05D004147 ORTHO05D005606 1.7e-100 370.2 264 67.0
RcHm_v2.0_Chr5g0084131 Rosa chinensis HOM05D004147 ORTHO05D005606 2.2e-100 369.8 264 69.3
Hma1.2p1_0589F.1_g184660 Hydrangea macrophylla HOM05D004147 ORTHO05D005606 2.8e-100 369.4 259 69.9
PSO675G6472 Papaver somniferum HOM05D004147 ORTHO05D005606 4.8e-100 368.6 268 69.0
Eucgr.J01722 Eucalyptus grandis HOM05D004147 ORTHO05D005606 6.3e-100 368.2 266 69.9
EL10Ac4g10393 Beta vulgaris HOM05D004147 ORTHO05D005606 1.1e-99 367.5 266 68.8
SGA_v2.0_scaffold6G03333 Striga asiatica HOM05D000201 ORTHO05D005606 1.1e-99 367.5 299 63.9
ATR0068G003 Amborella trichopoda HOM05D004147 ORTHO05D005606 1.8e-99 366.7 264 69.3
BraA05t20280Z Brassica rapa HOM05D004147 ORTHO05D005606 1.8e-99 366.7 265 67.2
Peaxi162Scf01181g00019 Petunia axillaris HOM05D004147 ORTHO05D005606 1.8e-99 366.7 301 65.1
C04p17540 Brassica napus HOM05D004147 ORTHO05D005606 4.1e-99 365.5 265 66.8
BolC4t23301H Brassica oleracea HOM05D004147 ORTHO05D005606 4.1e-99 365.5 265 66.8
AL103U10050 Arabidopsis lyrata HOM05D004147 ORTHO05D005606 7.0e-99 364.8 262 67.9
AL4G27460 Arabidopsis lyrata HOM05D004147 ORTHO05D005606 7.0e-99 364.8 262 67.9
Rhsim13G0235300 Rhododendron simsii HOM05D004147 ORTHO05D005606 7.0e-99 364.8 307 62.2
Sc16g0009630 Simmondsia chinensis HOM05D004147 ORTHO05D005606 7.0e-99 364.8 265 66.4
Sed0000702 Sechium edule HOM05D004147 ORTHO05D005606 1.2e-98 364.0 264 66.7
A05p13420 Brassica napus HOM05D004147 ORTHO05D005606 2.0e-98 363.2 264 66.7
AT2G32080 Arabidopsis thaliana HOM05D004147 ORTHO05D005606 3.5e-98 362.5 264 66.7
Ah.04g161370 Amaranthus hybridus HOM05D004147 ORTHO05D005606 7.7e-98 361.3 273 68.5
AUR62042623 Chenopodium quinoa HOM05D004147 ORTHO05D005606 7.7e-98 361.3 305 60.7
Aa31LG5G4940 Aethionema arabicum HOM05D004147 ORTHO05D005606 1.0e-97 360.9 288 62.8
HanXRQChr14g0437101 Helianthus annuus HOM05D004147 ORTHO05D005606 1.7e-97 360.1 273 68.5
FAN21G1018 Fragaria x ananassa HOM05D004147 ORTHO05D005606 5.0e-97 358.6 270 67.4
Cc01_g00350 Coffea canephora HOM05D004147 ORTHO05D005606 6.5e-97 358.2 264 68.2
ClCG03G014680 Citrullus lanatus HOM05D004147 ORTHO05D005606 1.1e-96 357.5 264 67.4
SGA_v2.0_scaffold3G01703 Striga asiatica HOM05D004147 ORTHO05D005606 1.6e-95 353.6 264 68.6
GSVIVG01025513001 Vitis vinifera HOM05D004147 ORTHO05D005606 2.1e-95 353.2 243 72.4
Haze_22914 Corylus avellana HOM05D004147 ORTHO05D005606 1.4e-94 350.5 288 63.9
vmacro04279 Vaccinium macrocarpon HOM05D004147 ORTHO05D005606 2.3e-94 349.7 287 63.4
Actinidia16222 Actinidia chinensis HOM05D000201 ORTHO05D001601 2.0e-93 346.7 235 72.3
Sabra01G0000600 Salix brachista HOM05D004147 ORTHO05D005606 2.0e-93 346.7 304 60.2
SalBow3G0983 Salvia bowleyana HOM05D004147 ORTHO05D005606 2.6e-93 346.3 269 66.9
Psat7g134480 Pisum sativum HOM05D004147 ORTHO05D005606 4.1e-83 312.4 214 71.0
Manes.15G111500 Manihot esculenta HOM05D004147 ORTHO05D005606 2.0e-82 310.1 224 68.3
Nitab4.5_0000075g0060 Nicotiana tabacum HOM05D004147 ORTHO05D005606 5.9e-82 308.5 266 62.4
Nitab4.5_0000890g0080 Nicotiana tabacum HOM05D004147 ORTHO05D005606 5.9e-82 308.5 266 62.4
Sed0015400 Sechium edule HOM05D004147 ORTHO05D005606 2.2e-81 306.6 215 70.2
unitig_62.g23531 Utricularia gibba HOM05D004147 ORTHO05D005606 5.0e-81 305.4 255 62.0
CAN.G281.7 Capsicum annuum HOM05D004147 ORTHO05D005606 2.1e-79 300.1 264 61.0
CDE08G0894 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 6.1e-79 298.5 230 66.5
Pp3c17_4780 Physcomitrium patens HOM05D004147 ORTHO05D005606 5.7e-77 292.0 268 59.7
Pp3c14_13490 Physcomitrium patens HOM05D004147 ORTHO05D005606 1.3e-76 290.8 268 58.6
AagrBONN_evm.TU.Sc2ySwM_368.1732 Anthoceros agrestis HOM05D004147 ORTHO05D005606 2.8e-76 289.7 267 57.7
Lsat_1_v5_gn_2_50601 Lactuca sativa HOM05D004147 ORTHO05D005606 4.9e-76 288.9 266 57.9
CBR_g3650 Chara braunii HOM05D004147 ORTHO05D005606 5.9e-74 282.0 280 56.8
TAR623G0822 Trochodendron aralioides HOM05D004147 ORTHO05D005606 1.0e-73 281.2 205 68.3
SEGI_18063 Sequoiadendron giganteum HOM05D004147 ORTHO05D005606 5.0e-73 278.9 258 57.4
CDE08G0994 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 4.7e-71 272.3 214 63.1
Nn7g35773 Nelumbo nucifera HOM05D004147 ORTHO05D005606 2.9e-68 263.1 177 73.4
SMO164G0008 Selaginella moellendorffii HOM05D004147 ORTHO05D005606 4.9e-68 262.3 255 57.3
BcaB02g10449 Brassica carinata HOM05D004147 ORTHO05D005606 1.6e-66 257.3 203 63.1
Actinidia00922 Actinidia chinensis HOM05D004147 ORTHO05D005606 9.8e-61 238.0 182 66.5
Sabra03G0166400 Salix brachista HOM05D004147 ORTHO05D005606 9.8e-61 238.0 181 66.3
Solyc01g049680.3 Solanum lycopersicum HOM05D004147 ORTHO05D005606 4.9e-60 235.7 181 66.9
unitig_52.g17528 Utricularia gibba HOM05D004147 ORTHO05D005606 1.6e-50 204.1 190 57.9
Lj1A564T30 Lonicera japonica HOM05D004147 ORTHO05D005606 1.5e-48 197.6 246 48.8
Gorai.009G000700 Gossypium raimondii HOM05D004147 ORTHO05D005606 2.1e-47 193.7 147 66.0
HPP92_026678 Vanilla planifolia HOM05D004147 ORTHO05D005606 2.3e-41 173.7 94 86.2
Solyc01g049690.4 Solanum lycopersicum HOM05D004147 ORTHO05D005606 3.1e-38 163.3 87 86.2
Gorai.009G000600 Gossypium raimondii HOM05D004147 ORTHO05D005606 1.7e-36 157.5 87 81.6
Sabra01G0000400 Salix brachista HOM05D004147 ORTHO05D005606 2.9e-36 156.8 116 69.8
Potri.013G061100 Populus trichocarpa HOM05D004147 ORTHO05D005606 2.3e-33 147.1 251 37.8
Lj1A564T31 Lonicera japonica HOM05D004147 ORTHO05D005606 3.3e-32 143.3 114 64.9
CAN.G640.3 Capsicum annuum HOM05D004147 ORTHO05D005606 4.3e-32 142.9 86 76.7
CAN.G678.10 Capsicum annuum HOM05D004147 ORTHO05D005606 9.6e-32 141.7 93 74.2
MBI05_g14947_MAGBIO Magnolia biondii HOM05D000130 ORTHO05D002599 5.3e-30 136.0 100 68.0
PRCOL_00001079 Prasinoderma coloniale HOM05D004147 ORTHO05D005606 5.8e-29 132.5 250 34.8
FAN25G3109 Fragaria x ananassa HOM05D004147 ORTHO05D005606 2.2e-28 130.6 68 86.8
unitig_52.g17527 Utricularia gibba HOM05D004147 ORTHO05D005606 2.9e-28 130.2 68 88.2
Cre06.g278208 Chlamydomonas reinhardtii HOM05D004147 ORTHO05D005606 4.8e-23 112.8 237 29.5
Oeu023697.1 Olea europaea HOM05D004147 ORTHO05D005606 6.2e-23 112.5 66 77.3
Sabra01G0000300 Salix brachista HOM05D004147 ORTHO05D005606 1.4e-22 111.3 74 68.9
TWI32G1322 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 3.4e-21 106.7 249 29.7
C08p28370 Brassica napus HOM05D004147 ORTHO05D021856 1.2e-18 98.2 116 46.6
BolC8t50447H Brassica oleracea HOM05D004147 ORTHO05D021856 1.2e-18 98.2 116 46.6
BcaC03g17178 Brassica carinata HOM05D004147 ORTHO05D021856 3.0e-17 93.6 103 49.5
BolC2t11193H Brassica oleracea HOM05D004147 ORTHO05D005606 3.0e-17 93.6 103 49.5
A03p64870 Brassica napus HOM05D004147 ORTHO05D005606 3.9e-17 93.2 171 33.9
BolC5t32093H Brassica oleracea HOM05D004147 ORTHO05D021856 3.9e-17 93.2 103 48.5
Lsat_1_v5_gn_4_94280 Lactuca sativa HOM05D004147 ORTHO05D005606 6.7e-17 92.4 210 33.8
C02p30750 Brassica napus HOM05D004147 ORTHO05D021856 1.1e-16 91.7 116 44.8
BraA03t15549Z Brassica rapa HOM05D004147 ORTHO05D018802 1.9e-16 90.9 165 34.5
C05p33620 Brassica napus HOM05D004147 ORTHO05D021856 4.3e-16 89.7 103 47.6
BcaC07g39671 Brassica carinata HOM05D004147 ORTHO05D005606 4.0e-14 83.2 153 32.7
BraA05t19995Z Brassica rapa HOM05D004147 ORTHO05D018802 4.0e-14 83.2 153 32.0
HanXRQChr10g0307541 Helianthus annuus HOM05D004147 ORTHO05D005606 3.4e-13 80.1 46 73.9
BcaC07g38232 Brassica carinata HOM05D004147 ORTHO05D005606 5.8e-13 79.3 153 32.0
BraA09t36212Z Brassica rapa HOM05D004147 ORTHO05D018802 1.1e-11 75.1 139 33.8
TAR623G1050 Trochodendron aralioides HOM05D004147 ORTHO05D005606 2.5e-11 73.9 36 94.4
Lsat_1_v5_gn_8_97821 Lactuca sativa HOM05D004147 ORTHO05D005606 2.5e-08 63.9 34 82.4


User provided reference genes

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