Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2440 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 3.8e-289 998.0 748 100.0
CDE04G1707 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 1.4e-131 474.6 296 88.9
Ciclev10019079m.g Citrus clementina HOM05D005846 ORTHO05D007369 3.9e-84 317.0 219 76.3
GSVIVG01018216001 Vitis vinifera HOM05D005846 ORTHO05D007369 5.0e-84 316.6 221 75.1
Dinv44098 Davidia involucrata HOM05D005846 ORTHO05D007369 1.5e-83 315.1 221 76.0
HanXRQChr06g0168821 Helianthus annuus HOM05D005846 ORTHO05D007369 1.5e-83 315.1 217 75.1
ECA236G0469 Erigeron canadensis HOM05D005846 ORTHO05D007369 1.9e-83 314.7 219 75.3
arahy.Tifrunner.gnm1.ann1.DPE9LE Arachis hypogaea HOM05D005846 ORTHO05D007369 2.5e-83 314.3 210 77.1
arahy.Tifrunner.gnm1.ann1.SA9NP4 Arachis hypogaea HOM05D005846 ORTHO05D007369 2.5e-83 314.3 210 77.1
Eucgr.D02512 Eucalyptus grandis HOM05D005846 ORTHO05D007369 2.5e-83 314.3 209 77.5
MD07G1110700 Malus domestica HOM05D005846 ORTHO05D007369 2.5e-83 314.3 228 74.6
Sabra14G0041600 Salix brachista HOM05D002053 ORTHO05D002135 2.5e-83 314.3 213 78.4
QL04p035021 Quercus lobata HOM05D005846 ORTHO05D007369 4.3e-83 313.5 215 74.9
Aqoxy5G03824 Aquilegia oxysepala HOM05D005846 ORTHO05D007369 5.6e-83 313.2 218 74.3
Haze_02742 Corylus avellana HOM05D005846 ORTHO05D007369 7.3e-83 312.8 230 73.0
CiPaw.06G031700 Carya illinoinensis HOM05D005846 ORTHO05D007369 9.5e-83 312.4 215 74.9
CSS0006984 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 2.1e-82 311.2 215 75.3
Cfa011122 Carpinus fangiana HOM05D005846 ORTHO05D007369 2.1e-82 311.2 215 75.8
COL.COLO4_35176 Corchorus olitorius HOM05D005846 ORTHO05D007369 2.8e-82 310.8 216 75.0
Potri.014G057000 Populus trichocarpa HOM05D005846 ORTHO05D007369 2.8e-82 310.8 213 77.5
CSS0013945 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 3.6e-82 310.5 215 75.3
ATR0559G037 Amborella trichopoda HOM05D005846 ORTHO05D007369 4.7e-82 310.1 270 65.9
MBI05_g14240_MAGBIO Magnolia biondii HOM05D005846 ORTHO05D007369 4.7e-82 310.1 260 67.3
PGR004G1251 Punica granatum HOM05D005846 ORTHO05D007369 6.2e-82 309.7 210 76.2
Thecc.01G387400 Theobroma cacao HOM05D005846 ORTHO05D007369 8.1e-82 309.3 221 73.8
vmacro13469 Vaccinium macrocarpon HOM05D005846 ORTHO05D007369 1.4e-81 308.5 215 73.5
Lj9C561G11 Lonicera japonica HOM05D005846 ORTHO05D007369 1.8e-81 308.1 219 73.1
CANSAT21G1379 Cannabis sativa HOM05D005846 ORTHO05D007369 2.3e-81 307.8 221 72.9
Lsat_1_v5_gn_7_11161 Lactuca sativa HOM05D005846 ORTHO05D007369 2.3e-81 307.8 224 72.8
Medtr7g045280 Medicago truncatula HOM05D005846 ORTHO05D007369 5.2e-81 306.6 215 74.4
Rhsim02G0216700 Rhododendron simsii HOM05D005846 ORTHO05D007369 5.2e-81 306.6 213 73.2
VMungo1383G2837 Vigna mungo HOM05D005846 ORTHO05D007369 6.8e-81 306.2 212 74.5
TWI14G0811 Tripterygium wilfordii HOM05D005846 ORTHO05D007369 1.2e-80 305.4 293 60.8
TPR.G39153 Trifolium pratense HOM05D005846 ORTHO05D007369 2.0e-80 304.7 310 58.4
Nitab4.5_0003110g0060 Nicotiana tabacum HOM05D005846 ORTHO05D007369 2.6e-80 304.3 207 75.8
Psat3g158120 Pisum sativum HOM05D005846 ORTHO05D007369 2.6e-80 304.3 216 74.5
Manes.05G051500 Manihot esculenta HOM05D005846 ORTHO05D007369 3.4e-80 303.9 207 76.3
Hund27391 Selenicereus undatus HOM05D005846 ORTHO05D007369 3.4e-80 303.9 206 76.7
Sp4g27070 Schrenkiella parvula HOM05D005846 ORTHO05D007369 5.8e-80 303.1 248 67.7
Duzib116G0440 Durio zibethinus HOM05D005846 ORTHO05D007369 9.9e-80 302.4 285 61.4
Atru.chr5.196 Acer truncatum HOM05D005846 ORTHO05D007369 1.7e-79 301.6 243 67.9
Lj1g0009878 Lotus japonicus HOM05D005846 ORTHO05D007369 1.7e-79 301.6 213 73.7
FAN01G1706 Fragaria x ananassa HOM05D005846 ORTHO05D007369 2.2e-79 301.2 226 70.4
FAN06G0321 Fragaria x ananassa HOM05D005846 ORTHO05D007369 2.2e-79 301.2 226 69.9
Prupe.2G134200 Prunus persica HOM05D005846 ORTHO05D007369 2.9e-79 300.8 293 61.4
Carub.0004s2760 Capsella rubella HOM05D005846 ORTHO05D007369 4.9e-79 300.1 219 72.1
SGA_v2.0_scaffold52G19202 Striga asiatica HOM05D005846 ORTHO05D007369 4.9e-79 300.1 210 73.8
CsaV3_6G009050 Cucumis sativus L. HOM05D005846 ORTHO05D007369 6.4e-79 299.7 214 73.8
FAN10G1341 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.1e-78 298.9 224 70.5
AL4G44100 Arabidopsis lyrata HOM05D005846 ORTHO05D007369 1.4e-78 298.5 220 71.4
Cc02_g24740 Coffea canephora HOM05D005846 ORTHO05D007369 2.4e-78 297.7 209 74.6
AT2G45000 Arabidopsis thaliana HOM05D005846 ORTHO05D007369 5.4e-78 296.6 220 71.4
CARHR140260 Cardamine hirsuta HOM05D005846 ORTHO05D007369 7.1e-78 296.2 220 70.9
DCAR_031886 Daucus carota HOM05D005846 ORTHO05D007369 7.1e-78 296.2 209 71.8
Gohir.D11G145600 Gossypium hirsutum HOM05D005846 ORTHO05D007369 7.1e-78 296.2 214 73.8
Ah.05g173450 Amaranthus hybridus HOM05D005846 ORTHO05D007369 9.2e-78 295.8 207 75.4
Phvul.007G143350 Phaseolus vulgaris HOM05D005846 ORTHO05D007369 1.2e-77 295.4 277 61.4
Glyma.11G162365 Glycine max HOM05D005846 ORTHO05D007369 1.6e-77 295.0 210 73.3
Thhalv10001339m.g Eutrema salsugineum HOM05D005846 ORTHO05D007369 6.0e-77 293.1 295 58.6
RcHm_v2.0_Chr1g0348261 Rosa chinensis HOM05D005846 ORTHO05D007369 6.0e-77 293.1 267 62.5
A05p05100 Brassica napus HOM05D005846 ORTHO05D007369 1.0e-76 292.4 211 72.0
MSTRG.28219 Avicennia marina HOM05D005846 ORTHO05D007369 1.7e-76 291.6 209 70.8
FAN10G4209 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.7e-76 291.6 285 58.9
Actinidia22778 Actinidia chinensis HOM05D005846 ORTHO05D007369 2.3e-76 291.2 291 59.5
Actinidia22833 Actinidia chinensis HOM05D005846 ORTHO05D007369 2.3e-76 291.2 291 59.5
Aa31LG1G26590 Aethionema arabicum HOM05D005846 ORTHO05D007369 2.3e-76 291.2 226 69.5
Migut.B01566 Erythranthe guttata HOM05D005846 ORTHO05D007369 2.3e-76 291.2 209 70.3
Gohir.A11G139400 Gossypium hirsutum HOM05D005846 ORTHO05D007369 3.0e-76 290.8 289 61.9
Glyma.01G074700 Glycine max HOM05D005846 ORTHO05D007369 3.9e-76 290.4 289 59.5
Lalb_Chr19g0126671 Lupinus albus HOM05D005846 ORTHO05D007369 3.9e-76 290.4 218 71.1
FAN03G1473 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.1e-76 290.0 267 61.4
Gorai.007G156100 Gossypium raimondii HOM05D005846 ORTHO05D007369 8.6e-76 289.3 221 71.5
Sed0022623 Sechium edule HOM05D005846 ORTHO05D007369 1.5e-75 288.5 353 52.4
BraA05t19484Z Brassica rapa HOM05D005846 ORTHO05D007369 3.3e-75 287.3 295 58.3
CAN.G899.26 Capsicum annuum HOM05D005846 ORTHO05D007369 4.3e-75 287.0 320 55.3
THA.LOC104802481 Tarenaya hassleriana HOM05D005846 ORTHO05D007369 5.6e-75 286.6 271 63.5
FAN06G3163 Fragaria x ananassa HOM05D005846 ORTHO05D007369 7.3e-75 286.2 267 61.0
PSO675G5996 Papaver somniferum HOM05D005846 ORTHO05D007369 7.3e-75 286.2 266 62.0
Solyc01g090670.3 Solanum lycopersicum HOM05D005846 ORTHO05D007369 1.2e-74 285.4 287 59.2
Ca_26287_v3 Cicer arietinum L. HOM05D005846 ORTHO05D007369 1.6e-74 285.0 300 58.0
PSO541G5798 Papaver somniferum HOM05D005846 ORTHO05D007369 2.1e-74 284.6 250 64.4
TAR375G0515 Trochodendron aralioides HOM05D005846 ORTHO05D007369 4.7e-74 283.5 261 64.4
Peaxi162Scf00377g00722 Petunia axillaris HOM05D005846 ORTHO05D007369 8.1e-74 282.7 194 75.3
Nn6g33892 Nelumbo nucifera HOM05D005846 ORTHO05D007369 1.1e-73 282.3 194 78.4
EL10Ac1g00809 Beta vulgaris HOM05D005846 ORTHO05D007369 1.4e-73 282.0 202 73.8
ClCG06G002930 Citrullus lanatus HOM05D005846 ORTHO05D007369 1.8e-73 281.6 196 75.0
BcaC02g12270 Brassica carinata HOM05D005846 ORTHO05D007369 2.4e-73 281.2 296 57.8
Sopen01g036400 Solanum pennellii HOM05D005846 ORTHO05D007369 8.9e-73 279.3 306 55.2
C04p05950 Brassica napus HOM05D005846 ORTHO05D007369 2.0e-72 278.1 296 57.4
BolC4t22226H Brassica oleracea HOM05D005846 ORTHO05D007369 2.0e-72 278.1 296 57.4
MELO3C022237.2 Cucumis melo HOM05D005846 ORTHO05D007369 7.6e-72 276.2 252 62.3
unitig_26.g8879 Utricularia gibba HOM05D005846 ORTHO05D007369 1.9e-70 271.6 313 52.1
Zm00001eb367060 Zea mays HOM05D005846 ORTHO05D007369 2.7e-69 267.7 218 62.4
HanXRQChr04g0123471 Helianthus annuus HOM05D005846 ORTHO05D007369 6.6e-68 263.1 192 71.9
FvH4_7g10470 Fragaria vesca HOM05D005846 ORTHO05D007369 2.8e-66 257.7 185 72.4
Oeu061505.1 Olea europaea HOM05D005846 ORTHO05D007369 6.2e-66 256.5 185 71.9
AagrBONN_evm.TU.Sc2ySwM_117.1077 Anthoceros agrestis HOM05D005846 ORTHO05D007369 9.9e-64 249.2 260 55.0
arahy.Tifrunner.gnm1.ann1.2XVX2B Arachis hypogaea HOM05D005846 ORTHO05D007369 3.8e-63 247.3 225 61.3
HPP92_027757 Vanilla planifolia HOM05D005846 ORTHO05D007369 4.2e-62 243.8 203 63.5
AUR62004139 Chenopodium quinoa HOM05D005846 ORTHO05D007369 3.9e-60 237.3 198 65.2
Pp3c15_14630 Physcomitrium patens HOM05D005846 ORTHO05D007369 3.9e-60 237.3 282 50.4
Mapoly0005s0221 Marchantia polymorpha HOM05D005846 ORTHO05D007369 5.1e-60 236.9 317 49.8
AUR62013700 Chenopodium quinoa HOM05D005846 ORTHO05D007369 7.6e-56 223.0 188 65.4
PGR004G1857 Punica granatum HOM05D005846 ORTHO05D007369 4.9e-55 220.3 171 71.9
Sc02g0002920 Simmondsia chinensis HOM05D005846 ORTHO05D007369 1.3e-52 212.2 177 67.8
Nitab4.5_0001823g0090 Nicotiana tabacum HOM05D005846 ORTHO05D007369 5.6e-51 206.8 170 67.1
CBR_g21126 Chara braunii HOM05D005846 ORTHO05D007369 2.4e-46 191.4 246 49.6
HPP92_002750 Vanilla planifolia HOM05D005846 ORTHO05D007369 5.8e-40 170.2 147 60.5
Os01g0856600 Oryza sativa ssp. japonica HOM05D005846 ORTHO05D007369 1.2e-29 136.0 115 56.5
Atru.chr5.198 Acer truncatum HOM05D002424 ORTHO05D002640 1.8e-28 132.1 94 69.1
Cre16.g677700 Chlamydomonas reinhardtii HOM05D005846 ORTHO05D007369 3.3e-27 127.9 208 38.0
QL04p035108 Quercus lobata HOM05D005846 ORTHO05D007369 2.5e-22 111.7 77 68.8
arahy.Tifrunner.gnm1.ann1.V1AVP1 Arachis hypogaea HOM05D005846 ORTHO05D007369 9.4e-22 109.8 79 73.4
PRCOL_00002612 Prasinoderma coloniale HOM05D005846 ORTHO05D007369 3.9e-20 104.4 206 35.0
Cpa.g.sc22.4 Carica papaya HOM05D005846 ORTHO05D007369 1.1e-19 102.8 110 53.6
Cpa.g.sc22.5 Carica papaya HOM05D005846 ORTHO05D007369 3.3e-19 101.3 72 75.0
QL04p035237 Quercus lobata HOM05D005846 ORTHO05D007369 5.7e-19 100.5 76 64.5
QL05p084337 Quercus lobata HOM05D005846 ORTHO05D007369 5.3e-17 94.0 64 73.4
HPP92_006013 Vanilla planifolia HOM05D005846 ORTHO05D007369 2.2e-15 88.6 107 47.7
Lsat_1_v5_gn_4_126501 Lactuca sativa HOM05D005846 ORTHO05D007369 5.0e-15 87.4 63 71.4
Atru.chr5.201 Acer truncatum HOM05D005846 ORTHO05D007369 8.5e-15 86.7 63 63.5
HanXRQChr16g0530801 Helianthus annuus HOM05D005846 ORTHO05D007369 4.2e-14 84.3 180 34.4
C09p68450 Brassica napus HOM05D005846 ORTHO05D007369 9.4e-14 83.2 76 60.5
HanXRQChr12g0364311 Helianthus annuus HOM05D005846 ORTHO05D007369 4.7e-13 80.9 56 71.4
MCO01G259 Micromonas commoda HOM05D005846 ORTHO05D007369 6.1e-13 80.5 100 42.0
MCO01G299 Micromonas commoda HOM05D005846 ORTHO05D007369 6.1e-13 80.5 100 42.0
HPP92_002751 Vanilla planifolia HOM05D005846 ORTHO05D007369 1.0e-12 79.7 122 44.3
HanXRQChr01g0009681 Helianthus annuus HOM05D005846 ORTHO05D007369 1.8e-12 79.0 168 33.9
HanXRQChr02g0053971 Helianthus annuus HOM05D005846 ORTHO05D000176 1.8e-09 68.9 155 32.9
A05p20700 Brassica napus HOM05D005846 ORTHO05D007369 5.9e-08 63.9 126 42.1
HanXRQChr12g0366671 Helianthus annuus HOM05D005846 ORTHO05D007369 8.5e-07 60.1 39 74.4
BolC9t59592H Brassica oleracea HOM05D022734 ORTHO05D024517 2.5e-06 58.5 35 77.1
SalBow5G1215 Salvia bowleyana HOM05D005846 ORTHO05D007369 3.2e-06 58.2 70 52.9


User provided reference genes

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