Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2227 Ceratophyllum demersum HOM05D000882 ORTHO05D006555 0.0e+00 1442.6 755 100.0
CDE06G2110 Ceratophyllum demersum HOM05D000058 ORTHO05D006555 0.0e+00 1234.9 787 84.1
TAR629G2844 Trochodendron aralioides HOM05D000882 ORTHO05D006555 3.3e-75 287.3 935 29.9
TAR371G0751 Trochodendron aralioides HOM05D000882 ORTHO05D006555 3.8e-71 273.9 931 29.8
Nn4g22172 Nelumbo nucifera HOM05D000882 ORTHO05D006555 6.5e-71 273.1 948 30.0
CiPaw.05G103000 Carya illinoinensis HOM05D000882 ORTHO05D006555 4.2e-62 243.8 923 29.9
Cfa009433 Carpinus fangiana HOM05D000882 ORTHO05D006555 3.0e-60 237.7 925 29.1
MBI07_g40344_MAGBIO Magnolia biondii HOM05D000882 ORTHO05D006555 3.9e-60 237.3 982 30.1
Dinv18817 Davidia involucrata HOM05D000882 ORTHO05D006555 7.7e-56 223.0 862 29.6
Haze_12484 Corylus avellana HOM05D000882 ORTHO05D006555 6.5e-55 219.9 934 28.2
QL03p049824 Quercus lobata HOM05D000882 ORTHO05D006555 4.7e-53 213.8 948 27.1
TAR622G1309 Trochodendron aralioides HOM05D000882 ORTHO05D006555 1.4e-52 212.2 919 28.0
Gohir.A04G101000 Gossypium hirsutum HOM05D000882 ORTHO05D006555 8.8e-52 209.5 917 28.5
Actinidia34003 Actinidia chinensis HOM05D000882 ORTHO05D006555 9.7e-51 206.1 873 27.6
Duzib052G0681 Durio zibethinus HOM05D000882 ORTHO05D006555 1.7e-50 205.3 912 28.6
Gohir.D04G140200 Gossypium hirsutum HOM05D000882 ORTHO05D006555 2.8e-50 204.5 930 28.2
Gorai.012G125200 Gossypium raimondii HOM05D000882 ORTHO05D006555 4.8e-50 203.8 930 27.7
vmacro16077 Vaccinium macrocarpon HOM05D000882 ORTHO05D006555 1.4e-49 202.2 885 28.1
GSVIVG01004933001 Vitis vinifera HOM05D000882 ORTHO05D006555 4.1e-49 200.7 814 28.6
CiPaw.06G108300 Carya illinoinensis HOM05D000882 ORTHO05D006555 1.2e-48 199.1 920 28.7
CSS0000697 Camellia sinensis var. sinensis HOM05D000882 ORTHO05D006555 2.0e-48 198.4 936 28.3
Thecc.02G195000 Theobroma cacao HOM05D000882 ORTHO05D006555 2.6e-48 198.0 915 28.1
MD13G1129000 Malus domestica HOM05D000882 ORTHO05D006555 3.8e-47 194.1 880 27.0
Nitab4.5_0000011g0370 Nicotiana tabacum HOM05D000882 ORTHO05D006555 3.8e-47 194.1 841 28.7
Nitab4.5_0001510g0050 Nicotiana tabacum HOM05D000882 ORTHO05D006555 1.1e-46 192.6 858 28.4
Manes.09G186500 Manihot esculenta HOM05D000882 ORTHO05D006555 2.5e-46 191.4 899 28.9
Duzib132G0070 Durio zibethinus HOM05D000882 ORTHO05D006555 1.2e-45 189.1 947 27.1
Sabra01G0045500 Salix brachista HOM05D000882 ORTHO05D006555 1.6e-45 188.7 926 27.8
Sabra03G0119500 Salix brachista HOM05D000882 ORTHO05D006555 3.6e-45 187.6 929 25.9
COL.COLO4_05290 Corchorus olitorius HOM05D000882 ORTHO05D006555 3.0e-44 184.5 913 27.1
Sopen12g013920 Solanum pennellii HOM05D000882 ORTHO05D006555 3.9e-44 184.1 824 28.8
Aqoxy3G01872 Aquilegia oxysepala HOM05D000882 ORTHO05D006555 2.0e-43 181.8 937 27.0
Rhsim12G0098400 Rhododendron simsii HOM05D000882 ORTHO05D006555 2.6e-43 181.4 922 28.6
MD16G1128700 Malus domestica HOM05D000882 ORTHO05D006555 2.2e-42 178.3 804 28.1
TWI75G1568 Tripterygium wilfordii HOM05D000882 ORTHO05D006555 5.3e-41 173.7 883 28.5
Potri.003G164300 Populus trichocarpa HOM05D000882 ORTHO05D006555 7.0e-41 173.3 936 25.6
FAN17G1997 Fragaria x ananassa HOM05D000882 ORTHO05D006555 9.1e-41 172.9 924 27.7
PGSC0003DMG400020522 Solanum tuberosum HOM05D000882 ORTHO05D006555 9.1e-41 172.9 943 27.1
Cpa.g.sc2017.1 Carica papaya HOM05D000882 ORTHO05D006555 2.6e-40 171.4 723 28.8
Cc11_g15170 Coffea canephora HOM05D000882 ORTHO05D006555 2.6e-40 171.4 850 27.5
SGA_v2.0_scaffold85G26587 Striga asiatica HOM05D000882 ORTHO05D006555 2.6e-40 171.4 748 27.3
MSTRG.13303 Avicennia marina HOM05D000882 ORTHO05D006555 5.9e-40 170.2 798 27.6
HPP92_017906 Vanilla planifolia HOM05D000882 ORTHO05D006555 1.0e-39 169.5 850 28.1
Potri.001G065600 Populus trichocarpa HOM05D000882 ORTHO05D006555 1.7e-39 168.7 917 26.3
Migut.E00001 Erythranthe guttata HOM05D000882 ORTHO05D006555 2.9e-39 167.9 802 28.7
Lj1g0014200 Lotus japonicus HOM05D000882 ORTHO05D006555 5.0e-39 167.2 830 29.0
FAN07G0205 Fragaria x ananassa HOM05D000882 ORTHO05D006555 5.5e-38 163.7 906 27.4
CANSAT01G2636 Cannabis sativa HOM05D000882 ORTHO05D006555 7.2e-38 163.3 831 26.6
Hund06124 Selenicereus undatus HOM05D000882 ORTHO05D006555 7.2e-38 163.3 839 26.9
FvH4_4g22870 Fragaria vesca HOM05D000882 ORTHO05D006555 1.2e-37 162.5 839 27.3
Sed0022347 Sechium edule HOM05D000882 ORTHO05D006555 1.2e-37 162.5 869 26.5
Lalb_Chr04g0258101 Lupinus albus HOM05D000882 ORTHO05D006555 1.6e-37 162.2 918 28.0
FAN12G2306 Fragaria x ananassa HOM05D000882 ORTHO05D006555 2.1e-37 161.8 924 26.4
CsaV3_6G007820 Cucumis sativus L. HOM05D000882 ORTHO05D006555 3.6e-37 161.0 868 28.0
THA.LOC104812602 Tarenaya hassleriana HOM05D000882 ORTHO05D006555 4.7e-37 160.6 856 29.4
DCAR_024627 Daucus carota HOM05D000882 ORTHO05D006555 8.0e-37 159.8 839 26.6
CAN.G4.9 Capsicum annuum HOM05D000882 ORTHO05D006555 1.0e-36 159.5 648 29.2
Ciclev10030535m.g Citrus clementina HOM05D000882 ORTHO05D006555 2.3e-36 158.3 895 26.3
Lsat_1_v5_gn_3_32040 Lactuca sativa HOM05D000882 ORTHO05D006555 4.0e-36 157.5 818 27.5
ClCG06G001780 Citrullus lanatus HOM05D000882 ORTHO05D006555 8.8e-36 156.4 893 27.1
TWI36G0606 Tripterygium wilfordii HOM05D000882 ORTHO05D006555 8.8e-36 156.4 869 26.9
HanXRQChr11g0330821 Helianthus annuus HOM05D000882 ORTHO05D006555 2.6e-35 154.8 831 27.7
Oeu019433.1 Olea europaea HOM05D000882 ORTHO05D006555 2.6e-35 154.8 885 26.4
Eucgr.G01961 Eucalyptus grandis HOM05D000882 ORTHO05D006555 7.5e-35 153.3 900 26.1
Peaxi162Scf00023g00925 Petunia axillaris HOM05D000882 ORTHO05D006555 9.7e-35 152.9 899 27.8
Prupe.1G217600 Prunus persica HOM05D000882 ORTHO05D006555 2.8e-34 151.4 874 27.5
Sc11g0000160 Simmondsia chinensis HOM05D000882 ORTHO05D006555 2.8e-34 151.4 845 26.4
Actinidia09600 Actinidia chinensis HOM05D000882 ORTHO05D006555 3.7e-34 151.0 713 27.3
MELO3C022351.2 Cucumis melo HOM05D000882 ORTHO05D006555 3.7e-34 151.0 863 27.6
Lalb_Chr04g0258091 Lupinus albus HOM05D000882 ORTHO05D006555 3.7e-34 151.0 923 27.4
AL4G29210 Arabidopsis lyrata HOM05D000882 ORTHO05D006555 4.8e-34 150.6 838 26.4
Sp4g15880 Schrenkiella parvula HOM05D000882 ORTHO05D006555 4.8e-34 150.6 823 28.4
BcaB02g10571 Brassica carinata HOM05D000882 ORTHO05D006555 8.2e-34 149.8 734 28.1
arahy.Tifrunner.gnm1.ann1.W5XP03 Arachis hypogaea HOM05D000882 ORTHO05D006555 1.4e-33 149.1 880 26.6
RcHm_v2.0_Chr4g0429111 Rosa chinensis HOM05D000882 ORTHO05D006555 2.4e-33 148.3 807 26.3
AUR62005701 Chenopodium quinoa HOM05D000882 ORTHO05D006555 5.3e-33 147.1 819 26.0
PGR119G1660 Punica granatum HOM05D000882 ORTHO05D006555 7.0e-33 146.7 814 25.3
HanXRQChr06g0175061 Helianthus annuus HOM05D000882 ORTHO05D006555 9.1e-33 146.4 830 27.2
arahy.Tifrunner.gnm1.ann1.C8BV8A Arachis hypogaea HOM05D000882 ORTHO05D006555 5.9e-32 143.7 895 26.3
Thhalv10016157m.g Eutrema salsugineum HOM05D000882 ORTHO05D006555 7.7e-32 143.3 856 26.9
Medtr7g021190 Medicago truncatula HOM05D000882 ORTHO05D006555 2.2e-31 141.7 888 26.5
Ca_07088_v3 Cicer arietinum L. HOM05D000882 ORTHO05D006555 3.8e-31 141.0 897 27.0
EL10Ac6g13593 Beta vulgaris HOM05D000882 ORTHO05D006555 6.5e-31 140.2 813 26.3
Ah.03g135630 Amaranthus hybridus HOM05D002085 ORTHO05D006555 1.9e-30 138.7 833 25.2
Carub.0004s1517 Capsella rubella HOM05D000882 ORTHO05D006555 3.2e-30 137.9 816 26.1
C04p15540 Brassica napus HOM05D000882 ORTHO05D006555 4.2e-30 137.5 854 26.6
Zm00001eb170340 Zea mays HOM05D000882 ORTHO05D006555 5.5e-30 137.1 823 24.3
Glyma.18G282300 Glycine max HOM05D000882 ORTHO05D006555 1.6e-29 135.6 900 26.9
THA.LOC104820684 Tarenaya hassleriana HOM05D000882 ORTHO05D006555 8.0e-29 133.3 743 26.1
BolC4t23125H Brassica oleracea HOM05D000882 ORTHO05D006555 1.4e-28 132.5 859 26.4
Solyc12g063050.3 Solanum lycopersicum HOM05D000882 ORTHO05D006555 3.0e-28 131.3 640 28.3
Os11g0521900 Oryza sativa ssp. japonica HOM05D000882 ORTHO05D006555 6.8e-28 130.2 838 25.4
Aa31LG9G13470 Aethionema arabicum HOM05D000882 ORTHO05D006555 1.5e-27 129.0 828 25.7
Psat3g189480 Pisum sativum HOM05D000882 ORTHO05D006555 2.0e-27 128.6 546 29.9
AUR62028854 Chenopodium quinoa HOM05D000882 ORTHO05D006555 4.4e-27 127.5 836 25.0
Glyma.08G257900 Glycine max HOM05D000882 ORTHO05D006555 5.7e-27 127.1 903 26.5
A05p12000 Brassica napus HOM05D000882 ORTHO05D006555 7.5e-27 126.7 814 26.8
VMungo1383G3079 Vigna mungo HOM05D000882 ORTHO05D006555 9.8e-27 126.3 894 26.6
BraA05t20142Z Brassica rapa HOM05D000882 ORTHO05D006555 2.4e-25 121.7 820 26.2
HanXRQChr17g0540461 Helianthus annuus HOM05D000882 ORTHO05D006555 1.2e-24 119.4 800 26.0
Phvul.008G019000 Phaseolus vulgaris HOM05D000882 ORTHO05D006555 1.6e-24 119.0 913 25.4
TPR.G2920 Trifolium pratense HOM05D000882 ORTHO05D006555 2.7e-24 118.2 817 25.5
unitig_21.g20887 Utricularia gibba HOM05D000882 ORTHO05D006555 5.0e-23 114.0 774 23.8
AT2G33540 Arabidopsis thaliana HOM05D000882 ORTHO05D006555 1.9e-22 112.1 535 29.2
SHI04131 Sapria himalayana HOM05D000882 ORTHO05D006555 1.4e-20 105.9 474 28.5
CARHR127550 Cardamine hirsuta HOM05D000882 ORTHO05D006555 2.3e-20 105.1 513 28.1
PSO017G3338 Papaver somniferum HOM05D000882 ORTHO05D006555 3.4e-19 101.3 942 24.8
PSO478G0448 Papaver somniferum HOM05D000882 ORTHO05D006555 3.7e-18 97.8 927 23.8
Atru.BG.293.p Acer truncatum HOM05D000882 ORTHO05D006555 7.0e-17 93.6 365 28.5
Medtr4g119070 Medicago truncatula HOM05D000882 ORTHO05D006555 3.5e-16 91.3 719 24.3
PSO478G0828 Papaver somniferum HOM05D000882 ORTHO05D006555 5.0e-15 87.4 800 24.6
ATR0582G121 Amborella trichopoda HOM05D000882 ORTHO05D006555 9.5e-14 83.2 526 26.6
PSO017G1062 Papaver somniferum HOM05D000882 ORTHO05D006555 3.1e-12 78.2 791 24.0
Sed0024818 Sechium edule HOM05D000882 ORTHO05D006555 3.2e-09 68.2 758 24.5
ECA246G3785 Erigeron canadensis HOM05D000882 ORTHO05D006555 4.1e-09 67.8 849 23.7
Cpa.g.c35379 Carica papaya HOM05D000882 ORTHO05D006555 6.6e-07 60.5 123 38.2
SHI04132 Sapria himalayana HOM05D000882 ORTHO05D006555 2.5e-06 58.5 189 27.0


User provided reference genes

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