Gene: Lsat_1_v5_gn_3_32040
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_3_32040
- Transcript Identifier Lsat_1_v5_gn_3_32040.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_3 : 41999111-42003373 : positive
Gene Family Information
- ID HOM05D000882
- #Genes/#Species 677/99
- Phylogenetic origin
- ID ORTHO05D006555
- #Genes/#Species 141/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_3_32040.v5
- pacid 38918041
Descriptions
- Description PTHR23081:SF2 - RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070940 | IEA | InterPro | dephosphorylation of RNA polymerase II C-terminal domain | |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT2G33540 |
| GO:1900369 | ISO | PLAZA Integrative Orthology | negative regulation of RNA interference | AT2G33540 |
| GO:0009788 | ISO | PLAZA Integrative Orthology | negative regulation of abscisic acid-activated signaling pathway | AT2G33540 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008420 | IEA | InterPro | RNA polymerase II CTD heptapeptide repeat phosphatase activity | |
| GO:0004721 | ISO | PLAZA Homology (enrichment) | phosphoprotein phosphatase activity | HOM05D000882 |
| GO:0008022 | ISO | PLAZA Integrative Orthology | protein C-terminus binding | AT2G33540 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G33540 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |