Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2220 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 3.3e-119 431.8 226 100.0
CDE06G0990 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 1.3e-104 383.3 226 89.8
Nn8g41135 Nelumbo nucifera HOM05D005445 ORTHO05D007043 1.2e-81 307.0 226 71.7
TAR383G0382 Trochodendron aralioides HOM05D005445 ORTHO05D007043 2.4e-77 292.7 228 69.3
TAR383G1024 Trochodendron aralioides HOM05D005445 ORTHO05D007043 2.4e-77 292.7 228 69.3
MBI13_g31572_MAGBIO Magnolia biondii HOM05D005445 ORTHO05D007043 1.1e-74 283.9 229 69.4
Dinv26479 Davidia involucrata HOM05D005445 ORTHO05D007043 1.3e-70 270.4 226 63.7
Ciclev10008923m.g Citrus clementina HOM05D005445 ORTHO05D007043 5.3e-69 265.0 227 63.9
Hma1.2p1_0314F.1_g122070 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 4.5e-68 261.9 226 62.4
Glyma.08G027200 Glycine max HOM05D005445 ORTHO05D007043 5.8e-68 261.5 226 63.7
Hma1.2p1_0314F.1_g122080 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 2.9e-67 259.2 224 62.1
Dinv12613 Davidia involucrata HOM05D005445 ORTHO05D007043 4.9e-67 258.5 226 62.8
Aqoxy7G02630 Aquilegia oxysepala HOM05D005445 ORTHO05D007043 1.1e-66 257.3 227 63.9
GSVIVG01032266001 Vitis vinifera HOM05D005445 ORTHO05D007043 7.1e-66 254.6 227 62.1
Actinidia07565 Actinidia chinensis HOM05D005445 ORTHO05D007043 9.3e-66 254.2 226 61.1
CSS0000968 Camellia sinensis var. sinensis HOM05D005445 ORTHO05D007043 1.2e-65 253.8 227 61.2
Ca_17431_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 2.7e-65 252.7 227 62.6
Ca_17440_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 2.7e-65 252.7 227 62.6
Lj4g0004845 Lotus japonicus HOM05D005445 ORTHO05D007043 2.7e-65 252.7 226 61.1
Cpa.g.sc115.19 Carica papaya HOM05D005445 ORTHO05D007043 3.5e-65 252.3 225 61.3
Cc00_g00070 Coffea canephora HOM05D005445 ORTHO05D007043 1.3e-64 250.4 226 58.8
Thecc.09G196900 Theobroma cacao HOM05D005445 ORTHO05D007043 1.3e-64 250.4 227 62.6
DCAR_020460 Daucus carota HOM05D005445 ORTHO05D007043 1.8e-64 250.0 226 60.2
Atru.chr7.1013 Acer truncatum HOM05D005445 ORTHO05D007043 3.0e-64 249.2 225 61.8
arahy.Tifrunner.gnm1.ann1.HNJF4G Arachis hypogaea HOM05D005445 ORTHO05D007043 3.0e-64 249.2 226 61.1
Manes.02G221800 Manihot esculenta HOM05D005445 ORTHO05D007043 3.0e-64 249.2 227 60.4
TWI63G1185 Tripterygium wilfordii HOM05D005445 ORTHO05D007043 3.9e-64 248.8 226 60.6
Rhsim04G0099700 Rhododendron simsii HOM05D005445 ORTHO05D007043 5.1e-64 248.4 223 60.5
Cfa020755 Carpinus fangiana HOM05D005445 ORTHO05D007043 6.7e-64 248.1 226 62.4
Glyma.05G220700 Glycine max HOM05D005445 ORTHO05D007043 8.7e-64 247.7 226 61.9
CiPaw.15G161100 Carya illinoinensis HOM05D005445 ORTHO05D007043 1.5e-63 246.9 227 59.9
HPP92_028347 Vanilla planifolia HOM05D005445 ORTHO05D007043 2.5e-63 246.1 227 60.8
MSTRG.26517 Avicennia marina HOM05D005445 ORTHO05D007043 3.3e-63 245.7 227 59.5
Prupe.1G063800 Prunus persica HOM05D005445 ORTHO05D007043 5.6e-63 245.0 227 59.9
TPR.G25470 Trifolium pratense HOM05D005445 ORTHO05D007043 1.3e-62 243.8 227 60.4
VMungo0251G0086 Vigna mungo HOM05D005445 ORTHO05D007043 1.6e-62 243.4 226 61.1
ATR0626G233 Amborella trichopoda HOM05D005445 ORTHO05D007043 2.1e-62 243.0 228 57.5
Oeu028820.1 Olea europaea HOM05D005445 ORTHO05D007043 2.8e-62 242.7 226 58.4
Medtr8g101230 Medicago truncatula HOM05D005445 ORTHO05D007043 3.7e-62 242.3 227 61.2
Sabra06G0059700 Salix brachista HOM05D005445 ORTHO05D007043 3.7e-62 242.3 227 60.4
CANSAT80G1260 Cannabis sativa HOM05D005445 ORTHO05D007043 4.8e-62 241.9 227 59.0
arahy.Tifrunner.gnm1.ann1.K4ERET Arachis hypogaea HOM05D005445 ORTHO05D007043 8.1e-62 241.1 243 56.4
Dinv00323 Davidia involucrata HOM05D005445 ORTHO05D007043 2.4e-61 239.6 198 64.6
Nitab4.5_0000899g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 5.3e-61 238.4 226 57.5
SGA_v2.0_scaffold485G52365 Striga asiatica HOM05D005445 ORTHO05D007043 6.9e-61 238.0 226 57.5
Nitab4.5_0004036g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 9.0e-61 237.7 226 57.5
Sc14g0007060 Simmondsia chinensis HOM05D005445 ORTHO05D007043 9.0e-61 237.7 230 58.3
MD16G1238000 Malus domestica HOM05D005445 ORTHO05D007043 1.2e-60 237.3 227 58.6
Sopen07g006100 Solanum pennellii HOM05D005445 ORTHO05D007043 1.2e-60 237.3 226 56.6
CAN.G146.2 Capsicum annuum HOM05D005445 ORTHO05D007043 2.0e-60 236.5 226 56.6
AUR62020729 Chenopodium quinoa HOM05D005445 ORTHO05D007043 2.0e-60 236.5 231 57.6
Gohir.D08G027500 Gossypium hirsutum HOM05D005445 ORTHO05D007043 3.4e-60 235.7 227 60.4
Psat7g020920 Pisum sativum HOM05D005445 ORTHO05D007043 3.4e-60 235.7 227 60.4
Solyc07g017400.3 Solanum lycopersicum HOM05D005445 ORTHO05D007043 3.4e-60 235.7 226 56.2
Phvul.002G302400 Phaseolus vulgaris HOM05D005445 ORTHO05D007043 4.5e-60 235.3 226 60.2
Lalb_Chr05g0223811 Lupinus albus HOM05D005445 ORTHO05D007043 7.6e-60 234.6 226 58.0
Lalb_Chr09g0332001 Lupinus albus HOM05D005445 ORTHO05D007043 7.6e-60 234.6 226 58.8
Gohir.A08G017100 Gossypium hirsutum HOM05D005445 ORTHO05D007043 2.2e-59 233.0 227 59.5
SalBow5G4362 Salvia bowleyana HOM05D005445 ORTHO05D007043 2.2e-59 233.0 242 55.0
EL10Ac2g03624 Beta vulgaris HOM05D005445 ORTHO05D007043 8.4e-59 231.1 202 61.4
Ah.10g032730 Amaranthus hybridus HOM05D005445 ORTHO05D007043 1.4e-58 230.3 230 57.0
FvH4_4g06040 Fragaria vesca HOM05D005445 ORTHO05D007043 1.9e-58 229.9 227 58.1
Gorai.004G024500 Gossypium raimondii HOM05D005445 ORTHO05D007043 1.9e-58 229.9 232 59.1
RcHm_v2.0_Chr4g0397601 Rosa chinensis HOM05D005445 ORTHO05D007043 3.2e-58 229.2 228 58.8
QL11p008649 Quercus lobata HOM05D005445 ORTHO05D007043 4.2e-58 228.8 267 50.6
Hund03231 Selenicereus undatus HOM05D005445 ORTHO05D007043 7.1e-58 228.0 230 56.5
CiPaw.16G104300 Carya illinoinensis HOM05D005445 ORTHO05D007043 7.9e-57 224.6 228 57.5
Os05g0594800 Oryza sativa ssp. japonica HOM05D005445 ORTHO05D007043 7.9e-57 224.6 225 59.1
FAN17G2613 Fragaria x ananassa HOM05D005445 ORTHO05D007043 1.0e-56 224.2 227 57.7
Duzib168G0912 Durio zibethinus HOM05D005445 ORTHO05D007043 1.5e-55 220.3 239 54.8
Migut.L01918 Erythranthe guttata HOM05D005445 ORTHO05D007043 3.3e-55 219.2 227 52.9
HanXRQChr10g0309531 Helianthus annuus HOM05D005445 ORTHO05D007043 7.4e-55 218.0 226 54.4
ECA234G2663 Erigeron canadensis HOM05D005445 ORTHO05D007043 1.3e-54 217.2 226 52.7
PSO063G4940 Papaver somniferum HOM05D005445 ORTHO05D007043 4.8e-54 215.3 231 57.1
vmacro20760 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 6.3e-54 214.9 184 59.8
PSO170G6081 Papaver somniferum HOM05D005445 ORTHO05D007043 3.1e-53 212.6 229 57.2
AUR62027984 Chenopodium quinoa HOM05D005445 ORTHO05D007043 4.1e-53 212.2 256 50.8
Sed0003073 Sechium edule HOM05D005445 ORTHO05D007043 5.3e-53 211.8 215 55.3
Zm00001eb297230 Zea mays HOM05D005445 ORTHO05D007043 6.9e-53 211.5 234 56.4
AL4G19530 Arabidopsis lyrata HOM05D005445 ORTHO05D007043 1.2e-52 210.7 206 55.3
MELO3C003927.2 Cucumis melo HOM05D005445 ORTHO05D007043 1.2e-52 210.7 224 54.5
AT2G26590 Arabidopsis thaliana HOM05D005445 ORTHO05D007043 1.5e-52 210.3 206 55.8
SEGI_14233 Sequoiadendron giganteum HOM05D005445 ORTHO05D007043 2.0e-52 209.9 244 50.0
ClCG11G011350 Citrullus lanatus HOM05D005445 ORTHO05D007043 2.6e-52 209.5 225 55.1
PGR142G0598 Punica granatum HOM05D005445 ORTHO05D007043 2.6e-52 209.5 226 56.2
Sp4g09300 Schrenkiella parvula HOM05D005445 ORTHO05D007043 4.5e-52 208.8 206 55.8
CsaV3_2G009110 Cucumis sativus L. HOM05D005445 ORTHO05D007043 7.6e-52 208.0 225 54.2
Carub.0004s0844 Capsella rubella HOM05D005445 ORTHO05D007043 2.9e-51 206.1 209 56.0
FAN07G1413 Fragaria x ananassa HOM05D005445 ORTHO05D007043 2.9e-51 206.1 227 56.4
CARHR118490 Cardamine hirsuta HOM05D005445 ORTHO05D007043 8.4e-51 204.5 206 56.3
Lsat_1_v5_gn_5_80620 Lactuca sativa HOM05D005445 ORTHO05D007043 1.4e-50 203.8 205 54.1
BolC3t15563H Brassica oleracea HOM05D005445 ORTHO05D007043 3.2e-50 202.6 217 53.0
Thhalv10000977m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 7.2e-50 201.4 209 57.9
Eucgr.C00062 Eucalyptus grandis HOM05D005445 ORTHO05D007043 9.3e-50 201.1 227 52.4
unitig_85.g27245 Utricularia gibba HOM05D005445 ORTHO05D007043 1.2e-49 200.7 230 50.9
BraA03t11899Z Brassica rapa HOM05D005445 ORTHO05D007043 1.6e-49 200.3 206 52.9
C03p32210 Brassica napus HOM05D005445 ORTHO05D007043 3.5e-49 199.1 206 53.4
BcaC01g04909 Brassica carinata HOM05D005445 ORTHO05D007043 6.1e-49 198.4 206 53.4
BcaB01g03027 Brassica carinata HOM05D005445 ORTHO05D007043 7.9e-49 198.0 206 52.9
Thhalv10016855m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 2.3e-48 196.4 200 55.0
THA.LOC104815270 Tarenaya hassleriana HOM05D005445 ORTHO05D007043 3.0e-48 196.1 209 51.2
Aa31LG5G9140 Aethionema arabicum HOM05D005445 ORTHO05D007043 3.7e-46 189.1 216 50.5
Duzib170G0675 Durio zibethinus HOM05D005445 ORTHO05D007043 3.7e-46 189.1 226 48.7
Potri.006G078800 Populus trichocarpa HOM05D005445 ORTHO05D007043 1.1e-45 187.6 227 53.3
A03p26880 Brassica napus HOM05D005445 ORTHO05D007043 1.4e-45 187.2 206 51.0
Lj5C772G2 Lonicera japonica HOM05D005445 ORTHO05D007043 4.3e-39 165.6 177 53.7
Peaxi162Scf01184g00140 Petunia axillaris HOM05D005445 ORTHO05D007043 5.7e-39 165.2 257 42.0
Pp3c21_370 Physcomitrium patens HOM05D005445 ORTHO05D007043 1.8e-37 160.2 233 44.6
Sc14g0006300 Simmondsia chinensis HOM05D005445 ORTHO05D007043 3.1e-37 159.5 127 63.8
Mapoly0011s0124 Marchantia polymorpha HOM05D005445 ORTHO05D007043 4.7e-33 145.6 221 43.9
C03p32230 Brassica napus HOM05D005445 ORTHO05D007043 9.4e-26 121.3 79 72.2
BolC3t15564H Brassica oleracea HOM05D005445 ORTHO05D007043 9.4e-26 121.3 79 72.2
SMO116G0379 Selaginella moellendorffii HOM05D005445 ORTHO05D007043 1.6e-25 120.6 216 36.6
CBR_g28055 Chara braunii HOM05D005445 ORTHO05D007043 2.3e-24 116.7 255 33.7
MD13G1232400 Malus domestica HOM05D005445 ORTHO05D007043 1.5e-23 114.0 178 45.5
HanXRQChr09g0248391 Helianthus annuus HOM05D005445 ORTHO05D007043 6.8e-16 88.6 82 58.5
HanXRQChr09g0242981 Helianthus annuus HOM05D005445 ORTHO05D007043 1.5e-15 87.4 82 57.3
HanXRQChr13g0395691 Helianthus annuus HOM05D005445 ORTHO05D007043 1.5e-15 87.4 82 57.3
HanXRQChr09g0242991 Helianthus annuus HOM05D005445 ORTHO05D007043 9.8e-15 84.7 82 56.1
HanXRQChr09g0246171 Helianthus annuus HOM05D005445 ORTHO05D007043 2.2e-14 83.6 78 57.7
HPP92_015797 Vanilla planifolia HOM05D005445 ORTHO05D007043 1.4e-13 80.9 53 67.9
MCO02G027 Micromonas commoda HOM05D005445 ORTHO05D007043 9.1e-13 78.2 144 34.7
Cre11.g469450 Chlamydomonas reinhardtii HOM05D005445 ORTHO05D007043 9.4e-10 68.2 196 28.6


User provided reference genes

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