Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2074 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 3.5e-264 914.4 484 100.0
GSVIVG01026351001 Vitis vinifera HOM05D002281 ORTHO05D006774 4.7e-208 728.0 482 75.1
Nn3g19861 Nelumbo nucifera HOM05D002281 ORTHO05D006774 9.8e-206 720.3 479 77.2
CSS0040843 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 2.8e-200 702.2 482 75.9
Oeu001246.1 Olea europaea HOM05D002281 ORTHO05D006774 8.0e-200 700.7 482 75.1
Actinidia06827 Actinidia chinensis HOM05D002281 ORTHO05D006774 2.6e-198 695.7 482 72.6
MSTRG.27429 Avicennia marina HOM05D002281 ORTHO05D006774 7.5e-198 694.1 482 71.4
Lalb_Chr21g0311311 Lupinus albus HOM05D002281 ORTHO05D006774 1.4e-196 689.9 484 74.8
Manes.09G145600 Manihot esculenta HOM05D002281 ORTHO05D006774 1.4e-196 689.9 480 76.9
SGA_v2.0_scaffold62G21474 Striga asiatica HOM05D002281 ORTHO05D006774 1.4e-196 689.9 477 73.0
DCAR_027530 Daucus carota HOM05D002281 ORTHO05D006774 1.2e-195 686.8 486 75.1
CAN.G131.14 Capsicum annuum HOM05D002281 ORTHO05D006774 5.0e-194 681.4 485 72.6
COL.COLO4_38180 Corchorus olitorius HOM05D002281 ORTHO05D006774 6.6e-194 681.0 471 77.1
Eucgr.B02168 Eucalyptus grandis HOM05D002281 ORTHO05D006774 1.1e-193 680.2 485 74.8
Nitab4.5_0001498g0040 Nicotiana tabacum HOM05D002281 ORTHO05D006774 7.3e-193 677.6 486 73.0
Sed0014107 Sechium edule HOM05D002281 ORTHO05D006774 1.6e-192 676.4 479 75.6
TWI60G1049 Tripterygium wilfordii HOM05D002281 ORTHO05D006774 1.6e-192 676.4 480 73.5
MELO3C010108.2 Cucumis melo HOM05D002281 ORTHO05D006774 3.6e-192 675.2 477 75.7
Nitab4.5_0006530g0020 Nicotiana tabacum HOM05D002281 ORTHO05D006774 3.6e-192 675.2 486 73.0
CsaV3_1G044940 Cucumis sativus L. HOM05D002281 ORTHO05D006774 4.7e-192 674.9 477 75.5
Solyc04g050540.4 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.1e-191 673.7 485 72.4
TAR365G0274 Trochodendron aralioides HOM05D002281 ORTHO05D006774 1.1e-191 673.7 484 74.0
ClCG03G011380 Citrullus lanatus HOM05D002281 ORTHO05D006774 2.3e-191 672.5 477 75.1
Sopen04g021370 Solanum pennellii HOM05D002281 ORTHO05D006774 3.1e-191 672.2 485 72.2
PGR142G3453 Punica granatum HOM05D002281 ORTHO05D006774 1.2e-190 670.2 480 72.1
Aqoxy2G03815 Aquilegia oxysepala HOM05D002281 ORTHO05D006774 3.4e-190 668.7 482 73.4
Glyma.20G221100 Glycine max HOM05D002281 ORTHO05D006774 4.4e-190 668.3 482 74.1
PSO017G1794 Papaver somniferum HOM05D002281 ORTHO05D006774 1.3e-189 666.8 484 72.1
Lj5g0010111 Lotus japonicus HOM05D002281 ORTHO05D006774 6.4e-189 664.5 482 73.7
CANSAT54G2391 Cannabis sativa HOM05D002281 ORTHO05D006774 2.1e-187 659.4 508 67.9
Migut.F02048 Erythranthe guttata HOM05D002281 ORTHO05D006774 2.1e-187 659.4 481 71.1
Gohir.A13G103100 Gossypium hirsutum HOM05D002281 ORTHO05D006774 2.7e-187 659.1 483 73.7
FvH4_6g01350 Fragaria vesca HOM05D002281 ORTHO05D006774 3.5e-187 658.7 503 70.8
BcaNung04817 Brassica carinata HOM05D002281 ORTHO05D006774 4.6e-187 658.3 499 69.9
Ca_09982_v3 Cicer arietinum L. HOM05D002281 ORTHO05D006774 4.6e-187 658.3 488 72.3
THA.LOC104820754 Tarenaya hassleriana HOM05D002281 ORTHO05D006774 4.6e-187 658.3 491 73.1
Thhalv10020015m.g Eutrema salsugineum HOM05D002281 ORTHO05D006774 6.0e-187 657.9 497 69.6
Thecc.05G264900 Theobroma cacao HOM05D002281 ORTHO05D006774 1.0e-186 657.1 484 73.3
Gohir.D13G106200 Gossypium hirsutum HOM05D002281 ORTHO05D006774 1.7e-186 656.4 483 73.5
CARHR078410 Cardamine hirsuta HOM05D002281 ORTHO05D006774 6.6e-186 654.4 491 71.1
AL3G14240 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 8.6e-186 654.1 498 68.7
RcHm_v2.0_Chr3g0448921 Rosa chinensis HOM05D002281 ORTHO05D006774 8.6e-186 654.1 502 69.3
Sp3g03170 Schrenkiella parvula HOM05D002281 ORTHO05D006774 1.9e-185 652.9 498 69.9
Gorai.013G119100 Gossypium raimondii HOM05D002281 ORTHO05D006774 2.5e-185 652.5 483 73.1
AT3G04260 Arabidopsis thaliana HOM05D002281 ORTHO05D006774 3.3e-185 652.1 497 68.8
VMungo0720G2591 Vigna mungo HOM05D002281 ORTHO05D006774 3.3e-185 652.1 482 72.4
Carub.0003s0347 Capsella rubella HOM05D002281 ORTHO05D006774 4.3e-185 651.7 500 68.6
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea HOM05D002281 ORTHO05D006774 7.3e-185 651.0 488 72.1
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 7.3e-185 651.0 499 71.1
ATR0787G153 Amborella trichopoda HOM05D002281 ORTHO05D006774 9.5e-185 650.6 475 74.3
Ciclev10023441m.g Citrus clementina HOM05D002281 ORTHO05D006774 1.2e-184 650.2 485 71.3
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea HOM05D002281 ORTHO05D006774 2.8e-184 649.0 490 71.6
MD04G1234900 Malus domestica HOM05D002281 ORTHO05D006774 2.8e-184 649.0 493 71.8
BcaC09g47811 Brassica carinata HOM05D002281 ORTHO05D006774 3.6e-184 648.7 495 70.3
PSO063G1810 Papaver somniferum HOM05D002281 ORTHO05D006774 6.2e-184 647.9 484 70.5
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 2.4e-183 646.0 502 70.1
Peaxi162Scf00071g00258 Petunia axillaris HOM05D002281 ORTHO05D006774 4.0e-183 645.2 485 71.5
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 5.2e-183 644.8 499 70.3
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 8.9e-183 644.0 512 68.8
Glyma.10G168600 Glycine max HOM05D002281 ORTHO05D006774 1.5e-182 643.3 482 72.6
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 2.6e-182 642.5 514 68.5
Phvul.L002432 Phaseolus vulgaris HOM05D002281 ORTHO05D006774 2.6e-182 642.5 482 71.6
Cfa006305 Carpinus fangiana HOM05D002281 ORTHO05D006774 7.6e-182 641.0 475 72.8
BraA01t04526Z Brassica rapa HOM05D002281 ORTHO05D006774 1.3e-181 640.2 503 68.2
Atru.chr2.1137 Acer truncatum HOM05D002281 ORTHO05D006774 4.1e-180 635.2 480 71.7
unitig_899.g14420 Utricularia gibba HOM05D002281 ORTHO05D006774 1.6e-179 633.3 483 68.3
Medtr1g079525 Medicago truncatula HOM05D002281 ORTHO05D006774 7.8e-179 630.9 492 70.5
Hma1.2p1_0123F.1_g058110 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 1.0e-178 630.6 427 74.9
Sc16g0010030 Simmondsia chinensis HOM05D002281 ORTHO05D006774 1.3e-178 630.2 483 68.7
TPR.G31600 Trifolium pratense HOM05D002281 ORTHO05D006774 1.6e-176 623.2 482 72.0
Potri.019G025100 Populus trichocarpa HOM05D002281 ORTHO05D006774 8.1e-176 620.9 494 68.4
Psat6g141840 Pisum sativum HOM05D002281 ORTHO05D006774 3.1e-175 619.0 494 68.8
Hund07166 Selenicereus undatus HOM05D002281 ORTHO05D006774 2.6e-174 615.9 484 69.0
Aa31LG5G14740 Aethionema arabicum HOM05D002281 ORTHO05D006774 1.7e-173 613.2 505 67.5
Haze_04484 Corylus avellana HOM05D002281 ORTHO05D006774 6.4e-173 611.3 547 63.1
Lj2C48G13 Lonicera japonica HOM05D002281 ORTHO05D006774 2.1e-171 606.3 474 65.4
Os10g0462800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D006774 7.3e-169 597.8 494 64.4
Zm00001eb046590 Zea mays HOM05D002281 ORTHO05D006774 5.3e-167 591.7 484 66.9
HanXRQChr14g0434631 Helianthus annuus HOM05D002281 ORTHO05D006774 2.0e-166 589.7 480 62.7
Lsat_1_v5_gn_2_16580 Lactuca sativa HOM05D002281 ORTHO05D006774 2.0e-166 589.7 487 64.5
ECA238G3638 Erigeron canadensis HOM05D002281 ORTHO05D006774 7.6e-166 587.8 489 60.9
vmacro19967 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 2.2e-165 586.3 471 67.7
Sabra19G0037700 Salix brachista HOM05D002281 ORTHO05D006774 9.3e-164 580.9 485 68.0
Dinv05783 Davidia involucrata HOM05D002281 ORTHO05D006774 4.2e-156 555.4 482 62.4
Prupe.6G354700 Prunus persica HOM05D002281 ORTHO05D006774 5.5e-156 555.1 474 62.7
AUR62006996 Chenopodium quinoa HOM05D002281 ORTHO05D006774 3.5e-155 552.4 483 60.0
AUR62000641 Chenopodium quinoa HOM05D002281 ORTHO05D006774 8.7e-154 547.7 483 59.6
Sabra19G0034700 Salix brachista HOM05D002281 ORTHO05D006774 8.2e-152 541.2 493 63.9
Hma1.2p1_0123F.1_g058100 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 1.2e-150 537.3 394 70.6
EL10Ac4g09786 Beta vulgaris HOM05D002281 ORTHO05D006774 1.1e-148 530.8 482 60.6
Rhsim05G0169000 Rhododendron simsii HOM05D002281 ORTHO05D006774 6.9e-143 511.5 385 68.3
A01p40910 Brassica napus HOM05D002281 ORTHO05D006774 1.0e-138 497.7 405 65.9
BNapus_Darmor_BZH_scaffold_78p00800 Brassica napus HOM05D002281 ORTHO05D006774 1.0e-138 497.7 405 65.9
HPP92_025553 Vanilla planifolia HOM05D002281 ORTHO05D006774 6.9e-135 485.0 481 59.0
Cc00_g32050 Coffea canephora HOM05D002281 ORTHO05D006774 3.6e-131 472.6 348 74.1
SEGI_16679 Sequoiadendron giganteum HOM05D002281 ORTHO05D006774 2.6e-118 429.9 499 52.3
AagrBONN_evm.TU.Sc2ySwM_368.3437 Anthoceros agrestis HOM05D002281 ORTHO05D006774 1.5e-113 414.1 483 49.9
Mapoly0031s0123 Marchantia polymorpha HOM05D002281 ORTHO05D006774 1.1e-100 371.3 474 47.7
Pp3c1_8170 Physcomitrium patens HOM05D002281 ORTHO05D006774 2.0e-97 360.5 478 46.4
Cpa.g.sc51.36 Carica papaya HOM05D002281 ORTHO05D006774 4.1e-95 352.8 302 67.5
QL03p033056 Quercus lobata HOM05D002281 ORTHO05D006774 2.2e-88 330.5 197 83.2
SMO367G1266 Selaginella moellendorffii HOM05D002281 ORTHO05D006774 1.2e-86 324.7 485 39.4
CiPaw.07G076900 Carya illinoinensis HOM05D002281 ORTHO05D006774 4.9e-80 302.8 198 73.2
CBR_g7996 Chara braunii HOM05D002281 ORTHO05D006774 7.0e-79 298.9 495 36.2
Cc09_g03090 Coffea canephora HOM05D002281 ORTHO05D006774 8.4e-64 248.8 132 87.1
CiPaw.07G076800 Carya illinoinensis HOM05D002281 ORTHO05D006774 6.0e-62 242.7 133 84.2
Actinidia39977 Actinidia chinensis HOM05D002281 ORTHO05D006774 1.0e-53 215.3 144 68.1
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.0e-45 188.7 163 59.5
AL685U10020 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 4.3e-44 183.3 127 71.7
Sopen01g022760 Solanum pennellii HOM05D002281 ORTHO05D006774 1.3e-35 155.2 209 45.9
QL03p032920 Quercus lobata HOM05D002281 ORTHO05D006774 6.2e-35 152.9 125 63.2
QL03p033074 Quercus lobata HOM05D002281 ORTHO05D006774 3.8e-32 143.7 91 76.9
Solyc01g015200.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 3.2e-23 114.0 169 42.0
Solyc01g013970.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 4.8e-19 100.1 86 59.3
Solyc01g016930.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.1e-18 99.0 82 67.1
RcHm_v2.0_Chr1g0330901 Rosa chinensis HOM05D002281 ORTHO05D006774 2.4e-18 97.8 52 84.6
Actinidia39976 Actinidia chinensis HOM05D002281 ORTHO05D006774 1.5e-17 95.1 63 76.2
Solyc01g014000.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.1e-15 89.0 72 61.1
BolC1t05755H Brassica oleracea HOM05D002281 ORTHO05D006774 4.2e-15 87.0 54 79.6
Solyc01g016920.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.1e-12 79.0 53 77.4
Solyc01g016870.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 5.3e-10 70.1 71 63.4
BraA01t04528Z Brassica rapa HOM05D002281 ORTHO05D006774 2.2e-08 64.7 49 69.4
BolC1t05758H Brassica oleracea HOM05D002281 ORTHO05D006774 1.1e-07 62.4 42 71.4


User provided reference genes

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