Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 3.1e-170 601.7 294 100.0
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 1.3e-96 357.1 194 91.2
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 1.1e-87 327.4 303 56.8
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 2.4e-82 309.7 263 59.7
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 2.8e-78 296.2 261 57.9
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 3.8e-75 285.8 301 49.8
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 6.4e-75 285.0 258 54.3
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 6.4e-75 285.0 263 52.5
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 8.4e-75 284.6 265 55.1
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 1.1e-74 284.3 263 53.2
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 9.2e-74 281.2 283 51.9
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 3.5e-73 279.3 275 54.2
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 3.3e-71 272.7 237 58.2
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 7.3e-71 271.6 275 52.4
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 6.2e-70 268.5 265 52.5
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 1.1e-69 267.7 226 58.0
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 3.1e-69 266.2 268 51.9
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 1.5e-68 263.8 262 53.1
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 2.0e-68 263.5 219 59.8
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 2.0e-68 263.5 243 56.8
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 5.8e-68 261.9 262 52.7
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 5.8e-68 261.9 262 50.8
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 7.6e-68 261.5 240 56.2
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 1.3e-67 260.8 281 50.9
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 2.2e-67 260.0 257 51.8
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 6.4e-67 258.5 283 51.2
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 1.1e-66 257.7 245 51.4
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 1.4e-66 257.3 260 51.2
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 1.4e-66 257.3 220 57.7
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 1.4e-66 257.3 253 50.2
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 2.4e-66 256.5 219 58.4
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 3.2e-66 256.1 264 50.4
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 4.2e-66 255.8 258 50.8
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 9.3e-66 254.6 220 57.3
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 1.2e-65 254.2 258 50.8
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 1.6e-65 253.8 253 52.6
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 2.1e-65 253.4 265 49.1
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 3.5e-65 252.7 219 58.0
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 3.5e-65 252.7 261 51.0
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 6.0e-65 251.9 281 49.5
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 7.8e-65 251.5 243 52.7
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 1.0e-64 251.1 240 57.9
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 1.7e-64 250.4 225 54.7
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 3.9e-64 249.2 258 50.0
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 3.9e-64 249.2 253 49.0
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 1.1e-63 247.7 265 49.1
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 1.1e-63 247.7 264 48.9
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 1.5e-63 247.3 312 44.9
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 1.5e-63 247.3 253 51.8
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 1.5e-63 247.3 252 53.2
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 1.9e-63 246.9 262 48.9
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 1.9e-63 246.9 219 54.8
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 1.9e-63 246.9 256 50.0
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 2.5e-63 246.5 264 48.9
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 7.3e-63 245.0 217 55.3
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 9.6e-63 244.6 258 48.8
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 9.6e-63 244.6 260 48.8
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 2.1e-62 243.4 265 49.1
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 2.8e-62 243.0 220 57.3
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 4.8e-62 242.3 224 56.7
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 8.1e-62 241.5 263 50.2
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 8.1e-62 241.5 221 56.6
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 1.4e-61 240.7 261 47.5
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 3.1e-61 239.6 240 53.8
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 6.9e-61 238.4 271 47.6
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 6.9e-61 238.4 279 48.0
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 1.2e-60 237.7 248 52.4
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 2.0e-60 236.9 269 47.6
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 3.4e-60 236.1 232 51.3
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 5.8e-60 235.3 187 62.6
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 9.9e-60 234.6 262 47.3
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 9.9e-60 234.6 262 47.3
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.9e-59 233.0 262 47.3
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 6.4e-59 231.9 242 49.2
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 6.4e-59 231.9 266 49.2
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 8.4e-59 231.5 210 55.7
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 2.4e-58 229.9 211 55.0
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 3.2e-58 229.6 281 45.2
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 1.2e-57 227.6 286 45.5
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 1.2e-57 227.6 182 61.5
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 4.6e-57 225.7 212 52.8
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 1.0e-56 224.6 247 48.2
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 2.3e-56 223.4 227 50.2
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 3.3e-55 219.5 280 45.7
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 1.3e-54 217.6 235 48.1
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 1.6e-54 217.2 256 46.1
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 2.1e-54 216.9 269 45.0
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 4.8e-54 215.7 226 49.1
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 8.1e-54 214.9 225 49.8
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 1.8e-53 213.8 275 45.8
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 3.1e-53 213.0 178 60.7
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 4.5e-52 209.1 209 51.7
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 2.2e-51 206.8 213 52.6
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 2.9e-51 206.5 235 47.2
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 1.4e-50 204.1 264 43.6
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 4.2e-50 202.6 300 41.0
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 1.2e-49 201.1 176 53.4
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 1.2e-49 201.1 242 45.5
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 2.1e-49 200.3 269 42.8
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 2.1e-49 200.3 269 42.8
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 2.7e-49 199.9 189 52.9
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 4.6e-49 199.1 300 40.7
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 4.6e-49 199.1 305 40.0
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 4.6e-49 199.1 209 48.8
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 7.9e-49 198.4 266 42.5
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 1.4e-45 187.6 291 39.2
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 1.7e-43 180.6 172 51.7
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 1.9e-42 177.2 180 48.3
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 2.5e-42 176.8 170 51.8
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.3e-40 171.0 178 51.1
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 1.1e-39 167.9 142 55.6
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 3.3e-39 166.4 176 48.9
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.2e-36 157.9 176 48.9
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.7e-35 154.1 176 48.3
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 1.2e-33 147.9 170 44.1
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 3.6e-33 146.4 119 55.5
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 2.2e-30 137.1 152 44.7
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 4.8e-30 136.0 103 59.2
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 4.5e-28 129.4 133 47.4
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 6.5e-27 125.6 139 48.2
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.9e-26 124.0 105 57.1
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 2.3e-24 117.1 172 38.4
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 4.7e-17 92.8 80 58.8
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 1.3e-11 74.7 182 31.3
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 2.5e-10 70.5 69 53.6
Cre01.g021850 Chlamydomonas reinhardtii HOM05D005236 ORTHO05D006557 1.2e-09 68.2 172 33.1
SEGI_25648 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 5.2e-08 62.8 85 43.5


User provided reference genes

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