Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1254 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 3.2e-139 498.4 255 100.0
TAR371G0548 Trochodendron aralioides HOM05D005088 ORTHO05D006914 6.1e-82 308.1 218 69.7
Actinidia36135 Actinidia chinensis HOM05D005088 ORTHO05D006914 1.0e-81 307.4 209 73.2
Nn2g12382 Nelumbo nucifera HOM05D005088 ORTHO05D006914 2.3e-81 306.2 260 61.9
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 4.0e-81 305.4 238 66.4
vmacro05886 Vaccinium macrocarpon HOM05D005088 ORTHO05D006914 6.8e-81 304.7 252 63.5
Migut.H00031 Erythranthe guttata HOM05D005088 ORTHO05D006914 2.6e-80 302.8 218 68.3
GSVIVG01008659001 Vitis vinifera HOM05D005088 ORTHO05D006914 3.4e-80 302.4 218 69.7
Manes.15G152700 Manihot esculenta HOM05D005088 ORTHO05D006914 1.3e-79 300.4 243 63.8
TWI63G0383 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 4.8e-79 298.5 240 65.4
RhsimUnG0006300 Rhododendron simsii HOM05D005088 ORTHO05D006914 6.3e-79 298.1 211 71.6
RhsimUnG0087300 Rhododendron simsii HOM05D005088 ORTHO05D006914 1.8e-78 296.6 211 71.6
CsaV3_5G026950 Cucumis sativus L. HOM05D005088 ORTHO05D006914 2.4e-78 296.2 225 67.6
Sed0009164 Sechium edule HOM05D005088 ORTHO05D006914 3.1e-78 295.8 239 65.3
ATR1136G111 Amborella trichopoda HOM05D005088 ORTHO05D006914 1.2e-77 293.9 253 60.9
Oeu013966.1 Olea europaea HOM05D005088 ORTHO05D006914 1.2e-77 293.9 211 71.1
Lsat_1_v5_gn_7_9521 Lactuca sativa HOM05D005088 ORTHO05D006914 5.9e-77 291.6 246 60.6
PGR142G2056 Punica granatum HOM05D005088 ORTHO05D006914 1.0e-76 290.8 237 62.4
HanXRQChr04g0122711 Helianthus annuus HOM05D005088 ORTHO05D006914 2.3e-76 289.7 241 62.2
ClCG09G019430 Citrullus lanatus HOM05D005088 ORTHO05D006914 2.9e-76 289.3 254 60.2
MELO3C021598.2 Cucumis melo HOM05D005088 ORTHO05D006914 1.9e-75 286.6 230 63.9
SalBow4G2808 Salvia bowleyana HOM05D005088 ORTHO05D006914 4.2e-75 285.4 216 66.7
Dinv22813 Davidia involucrata HOM05D005088 ORTHO05D006914 7.2e-75 284.6 199 72.9
SalBow8G2200 Salvia bowleyana HOM05D005088 ORTHO05D006914 7.2e-75 284.6 220 65.9
Ciclev10015979m.g Citrus clementina HOM05D005088 ORTHO05D006914 2.8e-74 282.7 257 58.8
Aqoxy5G03675 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 3.6e-74 282.3 251 57.4
ECA236G2300 Erigeron canadensis HOM05D005088 ORTHO05D006914 3.6e-74 282.3 241 60.2
TWI73G1260 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 3.6e-74 282.3 240 62.1
EL10Ac6g15396 Beta vulgaris HOM05D005088 ORTHO05D006914 1.0e-73 280.8 209 66.0
CiPaw.03G046700 Carya illinoinensis HOM05D005088 ORTHO05D006914 1.0e-73 280.8 255 58.4
Peaxi162Scf00420g00135 Petunia axillaris HOM05D005088 ORTHO05D006914 1.4e-73 280.4 223 61.4
Solyc10g008130.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 1.4e-73 280.4 224 62.5
Sopen10g004000 Solanum pennellii HOM05D005088 ORTHO05D006914 1.4e-73 280.4 224 62.5
PGSC0003DMG400021851 Solanum tuberosum HOM05D005088 ORTHO05D006914 1.4e-73 280.4 224 62.5
Sopen01g054060 Solanum pennellii HOM05D005088 ORTHO05D006914 3.0e-73 279.3 225 63.1
Aqoxy7G00744 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 4.0e-73 278.9 250 56.8
THA.LOC104820717 Tarenaya hassleriana HOM05D005088 ORTHO05D006914 4.0e-73 278.9 229 61.6
Atru.chr6.2443 Acer truncatum HOM05D005088 ORTHO05D006914 5.2e-73 278.5 223 65.5
Thecc.04G021300 Theobroma cacao HOM05D005088 ORTHO05D006914 6.8e-73 278.1 220 65.0
SEGI_26999 Sequoiadendron giganteum HOM05D005088 ORTHO05D006914 1.5e-72 276.9 253 56.1
Sc14g0003070 Simmondsia chinensis HOM05D005088 ORTHO05D006914 2.0e-72 276.6 215 64.2
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 2.6e-72 276.2 209 67.9
Hma1.2p1_0587F.1_g183900 Hydrangea macrophylla HOM05D005088 ORTHO05D006914 7.5e-72 274.6 199 67.8
Nitab4.5_0006478g0030 Nicotiana tabacum HOM05D005088 ORTHO05D006914 9.8e-72 274.2 242 57.9
Duzib147G1185 Durio zibethinus HOM05D005088 ORTHO05D006914 1.7e-71 273.5 245 61.2
Nitab4.5_0001562g0080 Nicotiana tabacum HOM05D005088 ORTHO05D006914 2.2e-71 273.1 252 55.2
Gohir.A07G224400 Gossypium hirsutum HOM05D005088 ORTHO05D006914 4.9e-71 271.9 217 64.5
CANSAT64G2170 Cannabis sativa HOM05D005088 ORTHO05D006914 1.1e-70 270.8 254 57.5
Gohir.D07G231700 Gossypium hirsutum HOM05D005088 ORTHO05D006914 1.1e-70 270.8 216 64.8
Gorai.001G266900 Gossypium raimondii HOM05D005088 ORTHO05D006914 1.1e-70 270.8 214 65.4
PSO063G5784 Papaver somniferum HOM05D005088 ORTHO05D006914 1.1e-70 270.8 222 61.7
Haze_14769 Corylus avellana HOM05D005088 ORTHO05D006914 3.2e-70 269.2 233 57.9
PSO754G0075 Papaver somniferum HOM05D005088 ORTHO05D006914 4.1e-70 268.9 225 61.3
HPP92_010722 Vanilla planifolia HOM05D005088 ORTHO05D006914 4.1e-70 268.9 242 57.9
Thhalv10006186m.g Eutrema salsugineum HOM05D005088 ORTHO05D006914 9.2e-70 267.7 255 54.5
Cc00_g04470 Coffea canephora HOM05D005088 ORTHO05D006914 1.6e-69 266.9 200 66.0
VMungo0464G1582 Vigna mungo HOM05D005088 ORTHO05D006914 1.6e-69 266.9 251 57.0
DCAR_011267 Daucus carota HOM05D005088 ORTHO05D006914 2.0e-69 266.5 228 61.4
Nitab4.5_0006683g0110 Nicotiana tabacum HOM05D005088 ORTHO05D006914 3.5e-69 265.8 248 55.2
Carub.0005s2328 Capsella rubella HOM05D005088 ORTHO05D006914 4.5e-69 265.4 218 60.1
Nitab4.5_0001357g0120 Nicotiana tabacum HOM05D005088 ORTHO05D006914 4.5e-69 265.4 236 56.8
CARHR166630 Cardamine hirsuta HOM05D005088 ORTHO05D006914 5.9e-69 265.0 218 61.0
Lj7A602T41 Lonicera japonica HOM05D005088 ORTHO05D006914 5.9e-69 265.0 159 78.6
Glyma.05G115100 Glycine max HOM05D005088 ORTHO05D006914 7.8e-69 264.6 234 59.8
Glyma.19G052200 Glycine max HOM05D005088 ORTHO05D006914 1.3e-68 263.8 211 63.5
BcaNung07365 Brassica carinata HOM05D005088 ORTHO05D006914 1.7e-68 263.5 218 59.2
BcaC07g39962 Brassica carinata HOM05D005088 ORTHO05D006914 2.9e-68 262.7 210 61.0
CANSAT64G1390 Cannabis sativa HOM05D005088 ORTHO05D006914 6.6e-68 261.5 253 55.7
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea HOM05D005088 ORTHO05D006914 8.6e-68 261.2 212 62.7
Aa31LG2G11590 Aethionema arabicum HOM05D005088 ORTHO05D006914 1.1e-67 260.8 250 53.2
Ah.15g098720 Amaranthus hybridus HOM05D005088 ORTHO05D006914 1.1e-67 260.8 218 59.6
unitig_748.g6973 Utricularia gibba HOM05D005088 ORTHO05D006914 1.1e-67 260.8 245 55.5
AL5G37860 Arabidopsis lyrata HOM05D005088 ORTHO05D006914 2.5e-67 259.6 218 58.3
A09p49430 Brassica napus HOM05D005088 ORTHO05D006914 2.5e-67 259.6 205 61.5
BraA09t40396Z Brassica rapa HOM05D005088 ORTHO05D006914 2.5e-67 259.6 205 61.5
AT3G56510 Arabidopsis thaliana HOM05D005088 ORTHO05D006914 3.3e-67 259.2 259 52.5
BolC8t50800H Brassica oleracea HOM05D005088 ORTHO05D006914 5.6e-67 258.5 205 61.0
QL02p073814 Quercus lobata HOM05D005088 ORTHO05D006914 5.6e-67 258.5 240 56.7
Prupe.3G295300 Prunus persica HOM05D005088 ORTHO05D006914 1.6e-66 256.9 255 55.7
Potri.001G341300 Populus trichocarpa HOM05D005088 ORTHO05D006914 6.1e-66 255.0 229 59.8
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea HOM05D005088 ORTHO05D006914 8.0e-66 254.6 220 59.5
MD17G1021200 Malus domestica HOM05D005088 ORTHO05D006914 1.8e-65 253.4 227 59.0
PGSC0003DMG400010550 Solanum tuberosum HOM05D005088 ORTHO05D006914 2.3e-65 253.1 199 63.3
Cpa.g.sc130.68 Carica papaya HOM05D005088 ORTHO05D006914 4.0e-65 252.3 204 63.2
MD09G1021000 Malus domestica HOM05D005088 ORTHO05D006914 1.2e-64 250.8 229 58.5
arahy.Tifrunner.gnm1.ann1.NQR6QW Arachis hypogaea HOM05D005088 ORTHO05D006914 2.0e-64 250.0 241 58.1
PSO210G5838 Papaver somniferum HOM05D005088 ORTHO05D006914 2.6e-64 249.6 214 57.5
Sabra16G0221300 Salix brachista HOM05D005088 ORTHO05D006914 2.6e-64 249.6 224 58.9
Psat1g081640 Pisum sativum HOM05D005088 ORTHO05D006914 3.4e-64 249.2 218 57.8
PSO210G1672 Papaver somniferum HOM05D005088 ORTHO05D006914 4.4e-64 248.8 213 58.2
C08p31790 Brassica napus HOM05D005088 ORTHO05D006914 6.4e-63 245.0 229 54.6
HPP92_010645 Vanilla planifolia HOM05D005088 ORTHO05D006914 6.4e-63 245.0 195 62.6
Phvul.004G060300 Phaseolus vulgaris HOM05D005088 ORTHO05D006914 8.3e-63 244.6 211 59.7
Lalb_Chr06g0174471 Lupinus albus HOM05D005088 ORTHO05D006914 1.4e-62 243.8 240 53.8
RcHm_v2.0_Chr2g0173471 Rosa chinensis HOM05D005088 ORTHO05D006914 7.0e-62 241.5 210 59.0
Pp3c15_21890 Physcomitrium patens HOM05D005088 ORTHO05D006914 1.6e-61 240.4 248 50.8
Medtr6g021760 Medicago truncatula HOM05D005088 ORTHO05D006914 2.0e-61 240.0 209 57.9
BcaNung07083 Brassica carinata HOM05D005088 ORTHO05D006914 4.6e-61 238.8 198 60.6
FvH4_6g52000 Fragaria vesca HOM05D005088 ORTHO05D006914 3.0e-60 236.1 223 56.5
Zm00001eb110920 Zea mays HOM05D005088 ORTHO05D006914 3.0e-60 236.1 255 52.5
FAN02G1545 Fragaria x ananassa HOM05D005088 ORTHO05D006914 2.5e-59 233.0 218 56.4
Lj4g0026117 Lotus japonicus HOM05D005088 ORTHO05D006914 3.3e-59 232.6 212 58.0
CDE09G0918 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 4.3e-59 232.3 126 89.7
PGSC0003DMG400018652 Solanum tuberosum HOM05D005088 ORTHO05D006914 4.3e-59 232.3 201 60.2
Os07g0662600 Oryza sativa ssp. japonica HOM05D005088 ORTHO05D006914 5.6e-59 231.9 209 56.9
FAN14G4588 Fragaria x ananassa HOM05D005088 ORTHO05D006914 1.6e-58 230.3 218 56.0
FAN05G1017 Fragaria x ananassa HOM05D005088 ORTHO05D006914 2.1e-58 229.9 218 56.0
Ciclev10017686m.g Citrus clementina HOM05D005088 ORTHO05D006914 3.6e-58 229.2 167 68.3
Mapoly0020s0128 Marchantia polymorpha HOM05D005088 ORTHO05D006914 4.7e-58 228.8 216 51.9
FAN09G0922 Fragaria x ananassa HOM05D005088 ORTHO05D006914 1.8e-57 226.9 218 55.5
TAR629G0436 Trochodendron aralioides HOM05D005088 ORTHO05D006914 2.6e-56 223.0 173 67.6
Ca_04381_v3 Cicer arietinum L. HOM05D005088 ORTHO05D006914 7.5e-56 221.5 156 67.3
CBR_g229 Chara braunii HOM05D005088 ORTHO05D006914 2.2e-55 219.9 237 48.9
PSO782G2229 Papaver somniferum HOM05D005088 ORTHO05D006914 9.2e-54 214.5 242 51.2
SHI10481 Sapria himalayana HOM05D005088 ORTHO05D006914 1.6e-53 213.8 231 51.1
Psat5g064920 Pisum sativum HOM05D005088 ORTHO05D006914 2.5e-51 206.5 211 52.6
Solyc01g112010.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 1.6e-50 203.8 163 63.8
COL.COLO4_29189 Corchorus olitorius HOM05D005088 ORTHO05D006914 2.1e-50 203.4 168 61.3
TAR629G1146 Trochodendron aralioides HOM05D005088 ORTHO05D006914 2.3e-49 199.9 183 57.9
Cre06.g264500 Chlamydomonas reinhardtii HOM05D005088 ORTHO05D006914 3.4e-48 196.1 163 57.1
MCO13G391 Micromonas commoda HOM05D005088 ORTHO05D006914 1.9e-43 180.3 163 54.0
AUR62029179 Chenopodium quinoa HOM05D005088 ORTHO05D006914 2.4e-41 173.3 118 71.2
SMO347G0658 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 3.4e-40 169.5 173 52.0
SGA_v2.0_scaffold18G08253 Striga asiatica HOM05D005088 ORTHO05D006914 2.5e-35 153.3 126 60.3
MD09G1021200 Malus domestica HOM05D005088 ORTHO05D006914 3.4e-32 142.9 132 56.1
Sp5g06120 Schrenkiella parvula HOM05D005088 ORTHO05D006914 7.6e-32 141.7 248 36.3
PRCOL_00000286 Prasinoderma coloniale HOM05D005088 ORTHO05D006914 6.6e-28 128.6 195 38.5
DCAR_001396 Daucus carota HOM05D005088 ORTHO05D006914 1.5e-27 127.5 95 61.1
SpUn0233_0020 Schrenkiella parvula HOM05D005088 ORTHO05D006914 3.6e-26 122.9 135 48.1
BcaB02g08365 Brassica carinata HOM05D005088 ORTHO05D006914 2.0e-24 117.1 184 40.8
Oeu060752.1 Olea europaea HOM05D005088 ORTHO05D006914 4.6e-21 105.9 140 47.9
Sed0009105 Sechium edule HOM05D005088 ORTHO05D006914 3.0e-20 103.2 154 46.8
Manes.17G110201 Manihot esculenta HOM05D005088 ORTHO05D006914 1.3e-12 77.8 68 54.4
C04p35970 Brassica napus HOM05D005088 ORTHO05D017652 2.4e-09 67.0 74 50.0
BolC4t25202H Brassica oleracea HOM05D005088 ORTHO05D017652 2.4e-09 67.0 74 50.0
BcaC02g09844 Brassica carinata HOM05D005088 ORTHO05D017652 5.3e-09 65.9 75 48.0
SMO235G0038 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 7.2e-06 55.5 95 40.0


User provided reference genes

Program Settings