Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0179 Ceratophyllum demersum HOM05D004611 ORTHO05D005794 0.0e+00 1439.5 740 100.0
Manes.03G208700 Manihot esculenta HOM05D004611 ORTHO05D005794 0.0e+00 1102.0 735 76.1
Gohir.A02G056200 Gossypium hirsutum HOM05D004611 ORTHO05D005794 0.0e+00 1101.3 738 75.9
Sabra08G0076500 Salix brachista HOM05D004611 ORTHO05D005794 0.0e+00 1099.7 730 75.9
TWI73G0848 Tripterygium wilfordii HOM05D004611 ORTHO05D005794 0.0e+00 1096.6 737 75.8
MBI19_g32689_MAGBIO Magnolia biondii HOM05D004611 ORTHO05D005794 0.0e+00 1095.9 735 75.9
RcHm_v2.0_Chr4g0426211 Rosa chinensis HOM05D004611 ORTHO05D005794 0.0e+00 1095.1 728 75.4
Prupe.1G111500 Prunus persica HOM05D004611 ORTHO05D005794 0.0e+00 1094.3 731 75.0
Dinv15127 Davidia involucrata HOM05D004611 ORTHO05D005794 0.0e+00 1090.9 734 75.3
FvH4_4g20770 Fragaria vesca HOM05D004611 ORTHO05D005794 0.0e+00 1090.9 728 75.3
Nn8g40813 Nelumbo nucifera HOM05D004611 ORTHO05D005794 0.0e+00 1083.9 730 75.9
Potri.008G101200 Populus trichocarpa HOM05D004611 ORTHO05D005794 0.0e+00 1083.6 751 73.2
Lj6A696G31 Lonicera japonica HOM05D004611 ORTHO05D005794 0.0e+00 1083.2 748 73.8
MD13G1148000 Malus domestica HOM05D004611 ORTHO05D005794 0.0e+00 1078.2 728 74.3
PGR004G0015 Punica granatum HOM05D004611 ORTHO05D005794 0.0e+00 1078.2 727 74.8
GSVIVG01034941001 Vitis vinifera HOM05D004611 ORTHO05D005794 0.0e+00 1077.0 739 74.0
TAR362G1323 Trochodendron aralioides HOM05D004611 ORTHO05D005794 5.1e-312 1074.7 733 74.8
arahy.Tifrunner.gnm1.ann1.VX19JK Arachis hypogaea HOM05D004611 ORTHO05D005794 5.1e-312 1073.9 712 76.5
arahy.Tifrunner.gnm1.ann1.J0E0JD Arachis hypogaea HOM05D004611 ORTHO05D005794 5.1e-312 1073.5 712 76.5
Glyma.09G031900 Glycine max HOM05D004611 ORTHO05D005794 1.5e-311 1072.4 735 73.9
Cfa015689 Carpinus fangiana HOM05D004611 ORTHO05D005794 2.0e-311 1072.0 743 74.3
MD16G1147800 Malus domestica HOM05D004611 ORTHO05D005794 4.6e-311 1070.8 740 73.5
ClCG06G004360 Citrullus lanatus HOM05D004611 ORTHO05D005794 5.0e-310 1067.4 731 74.7
Sed0020756 Sechium edule HOM05D004611 ORTHO05D005794 5.0e-310 1067.4 740 73.9
FAN12G0652 Fragaria x ananassa HOM05D004611 ORTHO05D005794 6.5e-310 1067.0 769 71.0
Duzib151G0109 Durio zibethinus HOM05D004611 ORTHO05D005794 1.1e-309 1066.2 740 74.2
AUR62030016 Chenopodium quinoa HOM05D004611 ORTHO05D005794 1.9e-309 1065.4 741 72.5
ATR0693G069 Amborella trichopoda HOM05D004611 ORTHO05D005794 9.4e-309 1063.1 729 73.5
Atru.chr4.3104 Acer truncatum HOM05D004611 ORTHO05D005794 1.6e-308 1062.4 735 74.1
FAN07G0444 Fragaria x ananassa HOM05D004611 ORTHO05D005794 3.6e-308 1061.2 769 70.4
Thecc.04G307400 Theobroma cacao HOM05D004611 ORTHO05D005794 3.0e-307 1058.1 736 73.2
CSS0006805 Camellia sinensis var. sinensis HOM05D004611 ORTHO05D005794 1.2e-306 1056.2 734 73.6
PSO541G3737 Papaver somniferum HOM05D004611 ORTHO05D005794 2.0e-306 1055.4 733 74.2
PSO675G3276 Papaver somniferum HOM05D004611 ORTHO05D005794 7.5e-306 1053.5 733 74.1
Gorai.005G069100 Gossypium raimondii HOM05D004611 ORTHO05D005794 1.3e-305 1052.7 738 73.4
QL06p013322 Quercus lobata HOM05D004611 ORTHO05D005794 1.3e-305 1052.7 738 73.0
CiPaw.02G072100 Carya illinoinensis HOM05D004611 ORTHO05D005794 1.7e-305 1052.4 733 72.7
Gohir.D02G061400 Gossypium hirsutum HOM05D004611 ORTHO05D005794 4.8e-305 1050.8 738 73.2
Ciclev10004185m.g Citrus clementina HOM05D004611 ORTHO05D005794 1.2e-303 1046.2 783 70.0
Sc25g0001590 Simmondsia chinensis HOM05D004611 ORTHO05D005794 4.5e-303 1044.3 733 73.0
COL.COLO4_34558 Corchorus olitorius HOM05D004611 ORTHO05D005794 1.0e-302 1043.1 735 72.5
Eucgr.H04083 Eucalyptus grandis HOM05D004611 ORTHO05D005794 1.3e-302 1042.7 733 72.3
CANSAT78G0742 Cannabis sativa HOM05D004611 ORTHO05D005794 1.7e-302 1042.3 738 72.1
Aqoxy2G02628 Aquilegia oxysepala HOM05D004611 ORTHO05D005794 2.9e-302 1041.6 743 72.4
Rhsim02G0001700 Rhododendron simsii HOM05D004611 ORTHO05D005794 8.5e-302 1040.0 728 72.4
DCAR_030442 Daucus carota HOM05D004611 ORTHO05D005794 4.2e-301 1037.7 729 72.0
Actinidia02513 Actinidia chinensis HOM05D004611 ORTHO05D005794 5.5e-301 1037.3 738 72.1
Lalb_Chr18g0058501 Lupinus albus HOM05D004611 ORTHO05D005794 8.0e-300 1033.5 736 71.6
THA.LOC104818864 Tarenaya hassleriana HOM05D004611 ORTHO05D005794 8.0e-300 1033.5 731 72.1
Glyma.15G136900 Glycine max HOM05D004611 ORTHO05D005794 1.8e-299 1032.3 741 71.0
TPR.G10113 Trifolium pratense HOM05D004611 ORTHO05D005794 5.2e-299 1030.8 727 71.9
vmacro15164 Vaccinium macrocarpon HOM05D004611 ORTHO05D005794 1.5e-298 1029.2 735 71.0
Phvul.006G121000 Phaseolus vulgaris HOM05D004611 ORTHO05D005794 2.0e-298 1028.9 740 70.8
Lsat_1_v5_gn_1_40220 Lactuca sativa HOM05D004611 ORTHO05D005794 7.5e-298 1026.9 735 71.3
Lj6g0013514 Lotus japonicus HOM05D004611 ORTHO05D005794 1.3e-297 1026.2 737 71.6
MELO3C021251.2 Cucumis melo HOM05D004611 ORTHO05D005794 4.9e-297 1024.2 731 72.0
Cc03_g00470 Coffea canephora HOM05D004611 ORTHO05D005794 6.3e-297 1023.8 747 69.9
Ca_00946_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 1.4e-296 1022.7 733 71.5
Ca_00952_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 1.4e-296 1022.7 733 71.5
CsaV3_6G000020 Cucumis sativus L. HOM05D004611 ORTHO05D005794 1.8e-296 1022.3 719 72.6
CAN.G179.3 Capsicum annuum HOM05D004611 ORTHO05D005794 3.1e-296 1021.5 732 71.4
Psat1g162720 Pisum sativum HOM05D004611 ORTHO05D005794 4.1e-296 1021.1 741 70.2
VMungo0540G0237 Vigna mungo HOM05D004611 ORTHO05D005794 5.4e-296 1020.8 740 70.8
Nitab4.5_0000062g0520 Nicotiana tabacum HOM05D004611 ORTHO05D005794 1.2e-295 1019.6 743 70.8
MSTRG.21753 Avicennia marina HOM05D004611 ORTHO05D005794 2.7e-295 1018.5 734 71.3
HanXRQChr11g0353941 Helianthus annuus HOM05D004611 ORTHO05D005794 3.5e-295 1018.1 735 70.3
BolC3t15649H Brassica oleracea HOM05D004611 ORTHO05D005794 5.6e-293 1010.7 738 71.3
DCAR_002526 Daucus carota HOM05D004611 ORTHO05D005794 5.6e-293 1010.7 739 69.4
BcaC01g04844 Brassica carinata HOM05D004611 ORTHO05D005794 1.2e-292 1009.6 751 70.2
C03p33270 Brassica napus HOM05D004611 ORTHO05D005794 1.2e-292 1009.6 738 71.1
AL8G23880 Arabidopsis lyrata HOM05D004611 ORTHO05D005794 1.6e-292 1009.2 741 70.6
BraA03t11969Z Brassica rapa HOM05D004611 ORTHO05D005794 1.4e-291 1006.1 738 70.6
SGA_v2.0_scaffold123G33405 Striga asiatica HOM05D004611 ORTHO05D005794 1.8e-291 1005.7 792 67.2
A03p27560 Brassica napus HOM05D004611 ORTHO05D005794 4.0e-291 1004.6 738 70.6
CARHR258790 Cardamine hirsuta HOM05D004611 ORTHO05D005794 5.2e-291 1004.2 732 71.4
BcaB01g02933 Brassica carinata HOM05D004611 ORTHO05D005794 6.8e-291 1003.8 747 70.4
AUR62002591 Chenopodium quinoa HOM05D004611 ORTHO05D005794 6.8e-291 1003.8 718 71.4
Sp6g11490 Schrenkiella parvula HOM05D004611 ORTHO05D005794 8.9e-291 1003.4 747 70.5
AT5G49930 Arabidopsis thaliana HOM05D004611 ORTHO05D005794 2.0e-290 1002.3 741 70.3
Migut.N00024 Erythranthe guttata HOM05D004611 ORTHO05D005794 1.7e-289 999.2 735 69.7
Thhalv10012510m.g Eutrema salsugineum HOM05D004611 ORTHO05D005794 1.7e-289 999.2 749 69.7
Zm00001eb136770 Zea mays HOM05D004611 ORTHO05D005794 6.4e-289 997.3 761 67.0
Ah.07g203900 Amaranthus hybridus HOM05D004611 ORTHO05D005794 8.3e-289 996.9 742 69.1
ECA247G1486 Erigeron canadensis HOM05D004611 ORTHO05D005794 1.1e-288 996.5 735 70.1
Aa31LG3G6800 Aethionema arabicum HOM05D004611 ORTHO05D005794 2.4e-288 995.3 730 70.8
Os12g0564600 Oryza sativa ssp. japonica HOM05D004611 ORTHO05D005794 3.5e-287 991.5 762 68.9
Carub.0008s0980 Capsella rubella HOM05D004611 ORTHO05D005794 5.9e-287 990.7 741 69.9
EL10Ac3g06291 Beta vulgaris HOM05D004611 ORTHO05D005794 5.6e-285 984.2 726 69.8
Haze_00831 Corylus avellana HOM05D004611 ORTHO05D005794 2.8e-276 955.3 764 66.9
Pp3c6_29680 Physcomitrium patens HOM05D004611 ORTHO05D005794 2.1e-263 912.5 737 62.8
GSVIVG01017617001 Vitis vinifera HOM05D004611 ORTHO05D005794 3.1e-259 898.7 741 64.6
Mapoly0029s0152 Marchantia polymorpha HOM05D004611 ORTHO05D005794 2.6e-250 869.0 721 62.6
AagrBONN_evm.TU.Sc2ySwM_344.977 Anthoceros agrestis HOM05D004611 ORTHO05D005794 2.3e-246 855.9 735 59.9
SMO356G0321 Selaginella moellendorffii HOM05D004611 ORTHO05D005794 2.7e-239 832.4 739 58.9
FAN17G1213 Fragaria x ananassa HOM05D004611 ORTHO05D005794 1.4e-232 810.1 580 71.0
Solyc01g057850.4 Solanum lycopersicum HOM05D004611 ORTHO05D005794 1.4e-227 793.5 590 69.3
Peaxi162Scf00126g01513 Petunia axillaris HOM05D004611 ORTHO05D005794 2.9e-225 785.8 591 69.9
unitig_746.g26903 Utricularia gibba HOM05D004611 ORTHO05D005794 6.5e-217 758.1 621 63.9
Sopen01g023180 Solanum pennellii HOM05D004611 ORTHO05D005794 1.1e-211 740.7 546 69.8
PGSC0003DMG401001235 Solanum tuberosum HOM05D004611 ORTHO05D005794 1.2e-210 737.3 541 71.2
Nitab4.5_0003678g0010 Nicotiana tabacum HOM05D004611 ORTHO05D005794 2.6e-210 736.1 589 65.2
CBR_g49302 Chara braunii HOM05D004611 ORTHO05D005794 3.4e-210 735.7 898 48.0
Oeu045272.1 Olea europaea HOM05D004611 ORTHO05D005794 3.7e-204 715.7 538 69.1
PRCOL_00000926 Prasinoderma coloniale HOM05D004611 ORTHO05D005794 2.5e-176 623.2 757 47.7
HPP92_010928 Vanilla planifolia HOM05D004611 ORTHO05D005794 1.9e-147 527.3 324 79.3
HPP92_010927 Vanilla planifolia HOM05D004611 ORTHO05D005794 2.8e-143 513.5 397 68.3
Actinidia14243 Actinidia chinensis HOM05D004611 ORTHO05D005794 2.7e-130 470.3 463 57.2
GSVIVG01017631001 Vitis vinifera HOM05D004611 ORTHO05D005794 2.6e-117 427.2 328 68.6
Cpa.g.sc146.72 Carica papaya HOM05D004611 ORTHO05D005794 6.0e-114 416.0 315 67.9
MCO13G239 Micromonas commoda HOM05D004611 ORTHO05D005794 1.1e-110 405.2 779 35.3
Cfa025106 Carpinus fangiana HOM05D004611 ORTHO05D005794 1.2e-93 348.6 797 33.4
SEGI_02813 Sequoiadendron giganteum HOM05D004611 ORTHO05D005794 1.3e-92 345.1 358 53.9
Sopen01g023170 Solanum pennellii HOM05D004611 ORTHO05D005794 1.2e-90 338.6 193 81.9
GSVIVG01017626001 Vitis vinifera HOM05D004611 ORTHO05D005794 1.8e-89 334.7 255 68.6
arahy.Tifrunner.gnm1.ann1.JPBR4U Arachis hypogaea HOM05D004611 ORTHO05D005794 2.4e-86 324.3 220 74.5
GSVIVG01017613001 Vitis vinifera HOM05D004611 ORTHO05D005794 1.2e-85 322.0 257 65.4
Oeu045271.1 Olea europaea HOM05D004611 ORTHO05D005794 2.5e-83 314.3 192 79.2
Cre17.g734961 Chlamydomonas reinhardtii HOM05D004611 ORTHO05D005794 4.0e-81 307.0 253 59.7
arahy.Tifrunner.gnm1.ann1.PAF7VJ Arachis hypogaea HOM05D004611 ORTHO05D005794 4.4e-64 250.4 149 85.9
SEGI_18823 Sequoiadendron giganteum HOM05D004611 ORTHO05D005794 1.3e-63 248.8 147 81.6
Solyc01g057840.3 Solanum lycopersicum HOM05D004611 ORTHO05D005794 6.6e-60 236.5 123 86.2
GSVIVG01017633001 Vitis vinifera HOM05D004611 ORTHO05D005794 1.5e-59 235.3 150 74.0
SEGI_12646 Sequoiadendron giganteum HOM05D004611 ORTHO05D005794 4.0e-57 227.3 153 71.9
Lsat_1_v5_gn_3_85221 Lactuca sativa HOM05D004611 ORTHO05D029976 4.7e-50 203.8 227 52.4
Lsat_1_v5_gn_5_111761 Lactuca sativa HOM05D004611 ORTHO05D029976 4.7e-50 203.8 227 52.0
Lsat_1_v5_gn_1_27520 Lactuca sativa HOM05D004611 ORTHO05D029976 8.0e-50 203.0 231 51.1
Lsat_1_v5_gn_2_109460 Lactuca sativa HOM05D004611 ORTHO05D029976 4.0e-49 200.7 227 52.0
Peaxi162Scf00126g01512 Petunia axillaris HOM05D004611 ORTHO05D005794 4.0e-49 200.7 116 80.2
Actinidia07517 Actinidia chinensis HOM05D004611 ORTHO05D005794 5.2e-49 200.3 106 92.5
arahy.Tifrunner.gnm1.ann1.MSK2EL Arachis hypogaea HOM05D004611 ORTHO05D005794 4.4e-48 197.2 113 87.6
PGSC0003DMG402001235 Solanum tuberosum HOM05D004611 ORTHO05D005794 1.3e-47 195.7 122 76.2
arahy.Tifrunner.gnm1.ann1.631YT7 Arachis hypogaea HOM05D004611 ORTHO05D005794 1.1e-46 192.6 111 87.4
arahy.Tifrunner.gnm1.ann1.N4MQ0H Arachis hypogaea HOM05D004611 ORTHO05D005794 2.4e-46 191.4 113 85.8
arahy.Tifrunner.gnm1.ann1.80REVR Arachis hypogaea HOM05D004611 ORTHO05D005794 7.1e-46 189.9 113 85.8
arahy.Tifrunner.gnm1.ann1.G1FZ3Z Arachis hypogaea HOM05D004611 ORTHO05D005794 4.6e-45 187.2 113 84.1
Actinidia07518 Actinidia chinensis HOM05D004611 ORTHO05D005794 5.1e-44 183.7 197 49.2
arahy.Tifrunner.gnm1.ann1.KEPZ3C Arachis hypogaea HOM05D004611 ORTHO05D005794 2.8e-42 177.9 109 84.4
SMO356G0537 Selaginella moellendorffii HOM05D004611 ORTHO05D005794 1.1e-41 176.0 479 30.9
arahy.Tifrunner.gnm1.ann1.F9ANIH Arachis hypogaea HOM05D004611 ORTHO05D005794 5.8e-40 170.2 106 81.1
arahy.Tifrunner.gnm1.ann1.LTB099 Arachis hypogaea HOM05D004611 ORTHO05D005794 7.1e-38 163.3 99 81.8
Actinidia25067 Actinidia chinensis HOM05D004611 ORTHO05D005794 1.0e-36 159.5 89 86.5
Atru.chr6.2576 Acer truncatum HOM05D004611 ORTHO05D005794 3.3e-35 154.5 97 76.3
Cpa.g.sc146.71 Carica papaya HOM05D004611 ORTHO05D005794 9.3e-30 136.3 82 80.5
arahy.Tifrunner.gnm1.ann1.0CQZ6Z Arachis hypogaea HOM05D000862 ORTHO05D000003 7.8e-21 106.7 75 74.7
arahy.Tifrunner.gnm1.ann1.R4H24K Arachis hypogaea HOM05D000862 ORTHO05D000003 2.3e-20 105.1 75 73.3
unitig_746.g26902 Utricularia gibba HOM05D004611 ORTHO05D005794 7.3e-19 100.1 68 72.1
COL.COLO4_13521 Corchorus olitorius HOM05D004611 ORTHO05D005794 9.6e-19 99.8 91 60.4


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