Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0761 Ceratophyllum demersum HOM05D001082 ORTHO05D005120 4.6e-186 654.4 335 100.0
TAR629G2955 Trochodendron aralioides HOM05D001082 ORTHO05D005120 5.7e-88 328.6 333 48.3
GSVIVG01015912001 Vitis vinifera HOM05D001082 ORTHO05D005120 3.5e-85 319.3 322 49.4
Dinv24538 Davidia involucrata HOM05D001082 ORTHO05D005120 5.9e-85 318.5 340 45.9
Nn3g20376 Nelumbo nucifera HOM05D001082 ORTHO05D005120 1.9e-83 313.5 325 47.7
CSS0006928 Camellia sinensis var. sinensis HOM05D001082 ORTHO05D005120 1.2e-82 310.8 340 45.3
PSO782G2901 Papaver somniferum HOM05D001082 ORTHO05D005120 4.0e-81 305.8 328 44.8
Glyma.13G142200 Glycine max HOM05D001082 ORTHO05D005120 4.9e-79 298.9 335 46.3
Sc07g0003370 Simmondsia chinensis HOM05D001082 ORTHO05D005120 1.4e-78 297.4 334 47.0
Aqoxy5G03217 Aquilegia oxysepala HOM05D001082 ORTHO05D005120 1.9e-78 297.0 338 44.4
Lj5g0014962 Lotus japonicus HOM05D001082 ORTHO05D005120 1.9e-78 297.0 333 44.1
Psat6g073960 Pisum sativum HOM05D001082 ORTHO05D005120 7.0e-78 295.0 333 44.1
Lj5C310G5 Lonicera japonica HOM05D001082 ORTHO05D005120 9.2e-78 294.7 326 46.0
Phvul.007G218900 Phaseolus vulgaris HOM05D001082 ORTHO05D005120 9.2e-78 294.7 334 43.7
CiPaw.02G126600 Carya illinoinensis HOM05D001082 ORTHO05D005120 1.2e-77 294.3 329 42.6
ATR0810G183 Amborella trichopoda HOM05D001082 ORTHO05D005120 2.0e-77 293.5 330 43.6
PSO063G6006 Papaver somniferum HOM05D001082 ORTHO05D005120 6.0e-77 292.0 328 43.9
Medtr1g063180 Medicago truncatula HOM05D001082 ORTHO05D005120 7.8e-77 291.6 333 43.5
Rhsim11G0112000 Rhododendron simsii HOM05D001082 ORTHO05D005120 1.0e-76 291.2 338 44.4
vmacro01638 Vaccinium macrocarpon HOM05D001082 ORTHO05D005120 1.0e-76 291.2 356 42.4
Cfa008545 Carpinus fangiana HOM05D001082 ORTHO05D005120 1.3e-76 290.8 324 42.6
Glyma.10G055100 Glycine max HOM05D001082 ORTHO05D005120 3.0e-76 289.7 335 44.5
Ca_11506_v3 Cicer arietinum L. HOM05D001082 ORTHO05D005120 1.5e-75 287.3 333 44.1
TPR.G11274 Trifolium pratense HOM05D001082 ORTHO05D005120 4.3e-75 285.8 325 43.7
Actinidia11712 Actinidia chinensis HOM05D001082 ORTHO05D005120 2.8e-74 283.1 286 48.6
PGR042G2652 Punica granatum HOM05D001082 ORTHO05D005120 8.1e-74 281.6 332 44.3
arahy.Tifrunner.gnm1.ann1.922X53 Arachis hypogaea HOM05D001082 ORTHO05D005120 1.1e-73 281.2 336 41.4
arahy.Tifrunner.gnm1.ann1.Y1BA5Y Arachis hypogaea HOM05D001082 ORTHO05D005120 1.1e-73 281.2 336 41.4
Manes.15G096100 Manihot esculenta HOM05D001082 ORTHO05D005120 4.0e-73 279.3 324 42.3
CsaV3_2G011850 Cucumis sativus L. HOM05D001082 ORTHO05D005120 7.5e-72 275.0 330 41.8
AUR62042820 Chenopodium quinoa HOM05D001082 ORTHO05D005120 1.1e-70 271.2 325 40.9
MELO3C020407.2 Cucumis melo HOM05D001082 ORTHO05D005120 2.4e-70 270.0 330 40.9
Prupe.5G022000 Prunus persica HOM05D001082 ORTHO05D005120 9.2e-70 268.1 332 43.1
RcHm_v2.0_Chr2g0126921 Rosa chinensis HOM05D001082 ORTHO05D005120 9.2e-70 268.1 343 43.4
EL10Ac6g13928 Beta vulgaris HOM05D001082 ORTHO05D005120 1.2e-69 267.7 324 40.7
CANSAT78G0369 Cannabis sativa HOM05D001082 ORTHO05D005120 2.7e-69 266.5 333 45.0
VMungo0720G1958 Vigna mungo HOM05D001082 ORTHO05D005120 2.7e-69 266.5 297 43.8
AUR62032513 Chenopodium quinoa HOM05D001082 ORTHO05D005120 1.0e-68 264.6 325 39.1
MD10G1009800 Malus domestica HOM05D001082 ORTHO05D005120 3.0e-68 263.1 326 40.5
FvH4_6g26400 Fragaria vesca HOM05D001082 ORTHO05D005120 3.9e-68 262.7 325 42.2
HanXRQChr14g0452101 Helianthus annuus HOM05D001082 ORTHO05D005120 3.9e-68 262.7 325 44.0
Peaxi162Scf00194g00732 Petunia axillaris HOM05D001082 ORTHO05D005120 1.5e-67 260.8 327 40.1
Lalb_Chr21g0315021 Lupinus albus HOM05D001082 ORTHO05D005120 2.5e-67 260.0 335 40.0
RcHm_v2.0_Chr4g0402211 Rosa chinensis HOM05D001082 ORTHO05D005120 3.3e-67 259.6 325 42.5
Lsat_1_v5_gn_7_54700 Lactuca sativa HOM05D001082 ORTHO05D005120 2.8e-66 256.5 324 39.8
Sed0025950 Sechium edule HOM05D001082 ORTHO05D005120 6.2e-66 255.4 331 40.2
Potri.001G078600 Populus trichocarpa HOM05D001082 ORTHO05D005120 4.0e-65 252.7 336 38.7
Cpa.g.sc21.222 Carica papaya HOM05D001082 ORTHO05D005120 5.2e-65 252.3 276 46.7
Ciclev10000026m.g Citrus clementina HOM05D001082 ORTHO05D005120 5.2e-65 252.3 325 40.3
Sopen01g044980 Solanum pennellii HOM05D001082 ORTHO05D005120 5.2e-65 252.3 324 40.7
ECA238G2349 Erigeron canadensis HOM05D001082 ORTHO05D005120 8.9e-65 251.5 324 38.9
FAN05G0906 Fragaria x ananassa HOM05D001082 ORTHO05D005120 1.2e-64 251.1 343 40.2
arahy.Tifrunner.gnm1.ann1.CLUS6A Arachis hypogaea HOM05D001082 ORTHO05D005120 1.5e-64 250.8 300 41.3
TWI14G0841 Tripterygium wilfordii HOM05D001082 ORTHO05D005120 4.4e-64 249.2 337 42.1
SEGI_00916 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 3.8e-63 246.1 327 41.9
Ah.03g136660 Amaranthus hybridus HOM05D001082 ORTHO05D005120 4.9e-63 245.7 346 37.3
MSTRG.5181 Avicennia marina HOM05D001082 ORTHO05D005120 6.4e-63 245.4 324 38.9
Zm00001eb232140 Zea mays HOM05D001082 ORTHO05D005120 5.4e-62 242.3 327 39.4
COL.COLO4_31206 Corchorus olitorius HOM05D001082 ORTHO05D005120 1.2e-61 241.1 327 40.1
ECA233G1970 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.6e-61 240.7 327 37.6
QL10p065261 Quercus lobata HOM05D001082 ORTHO05D005120 1.6e-61 240.7 370 41.4
Solyc01g102550.4 Solanum lycopersicum HOM05D001082 ORTHO05D005120 1.6e-61 240.7 298 42.3
Thecc.06G064200 Theobroma cacao HOM05D001082 ORTHO05D005120 4.6e-61 239.2 328 39.3
Migut.N00999 Erythranthe guttata HOM05D001082 ORTHO05D005120 2.3e-60 236.9 324 37.7
Nitab4.5_0000399g0040 Nicotiana tabacum HOM05D001082 ORTHO05D005120 3.9e-60 236.1 324 38.3
SGA_v2.0_scaffold8G04471 Striga asiatica HOM05D001082 ORTHO05D005120 1.1e-59 234.6 322 38.8
THA.LOC104806485 Tarenaya hassleriana HOM05D001082 ORTHO05D005120 1.5e-59 234.2 332 38.0
SalBow1G7939 Salvia bowleyana HOM05D001082 ORTHO05D005120 3.3e-59 233.0 350 34.9
Gorai.007G307100 Gossypium raimondii HOM05D001082 ORTHO05D005120 8.1e-58 228.4 327 37.9
Lj3g0009617 Lotus japonicus HOM05D001082 ORTHO05D005120 8.1e-58 228.4 312 41.3
Nitab4.5_0004090g0140 Nicotiana tabacum HOM05D001082 ORTHO05D005120 5.2e-57 225.7 324 38.0
TAR339G0004 Trochodendron aralioides HOM05D001082 ORTHO05D005120 5.8e-56 222.2 246 46.3
ECA233G1839 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.3e-55 221.1 317 36.6
Sp1g28860 Schrenkiella parvula HOM05D001082 ORTHO05D005120 1.7e-55 220.7 331 38.7
AT1G33410 Arabidopsis thaliana HOM05D001082 ORTHO05D005120 6.4e-55 218.8 340 37.1
Sabra01G0055900 Salix brachista HOM05D001082 ORTHO05D005120 1.1e-54 218.0 300 39.7
AL1G47790 Arabidopsis lyrata HOM05D001082 ORTHO05D005120 4.2e-54 216.1 331 37.8
Thhalv10006552m.g Eutrema salsugineum HOM05D001082 ORTHO05D005120 1.2e-53 214.5 329 38.3
CARHR032850 Cardamine hirsuta HOM05D001082 ORTHO05D005120 4.6e-53 212.6 330 36.4
BcaB03g13701 Brassica carinata HOM05D001082 ORTHO05D005120 7.8e-53 211.8 325 37.2
ClCG06G008340 Citrullus lanatus HOM05D001082 ORTHO05D005120 1.7e-52 210.7 438 30.1
SEGI_20053 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 8.7e-52 208.4 280 42.5
Hma1.2p1_0052F.1_g030140 Hydrangea macrophylla HOM05D001082 ORTHO05D005120 1.9e-51 207.2 210 48.1
Aa31LG6G7920 Aethionema arabicum HOM05D001082 ORTHO05D005120 2.5e-51 206.8 333 37.8
BcaC05g27806 Brassica carinata HOM05D001082 ORTHO05D005120 3.3e-51 206.5 334 38.3
C05p38080 Brassica napus HOM05D001082 ORTHO05D005120 1.6e-50 204.1 336 37.8
A05p24320 Brassica napus HOM05D001082 ORTHO05D005120 3.6e-50 203.0 329 37.1
BolC5t32536H Brassica oleracea HOM05D001082 ORTHO05D005120 2.4e-49 200.3 336 37.5
BraA05t21326Z Brassica rapa HOM05D001082 ORTHO05D005120 5.3e-49 199.1 331 36.9
ECA233G1393 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.5e-48 197.6 382 31.7
DCAR_003267 Daucus carota HOM05D001082 ORTHO05D005120 1.7e-47 194.1 337 35.0
Gohir.D11G284200 Gossypium hirsutum HOM05D001082 ORTHO05D005120 3.8e-47 193.0 262 40.1
CAN.G1379.29 Capsicum annuum HOM05D001082 ORTHO05D005120 6.0e-45 185.7 229 41.9
MD05G1161300 Malus domestica HOM05D001082 ORTHO05D005120 7.4e-43 178.7 259 38.2
Oeu010603.1 Olea europaea HOM05D001082 ORTHO05D005120 1.3e-39 167.9 371 31.3
Atru.chr12.2421 Acer truncatum HOM05D001082 ORTHO05D005120 1.6e-37 161.0 181 43.6
AagrBONN_evm.TU.Sc2ySwM_362.2782 Anthoceros agrestis HOM05D001082 ORTHO05D005120 7.4e-35 152.1 319 32.6
BolC4t27268H Brassica oleracea HOM05D001082 ORTHO05D005120 2.4e-33 147.1 299 32.8
SHI21155 Sapria himalayana HOM05D001082 ORTHO05D005120 2.0e-32 144.1 199 38.2
BcaC02g08190 Brassica carinata HOM05D001082 ORTHO05D005120 2.9e-31 140.2 296 31.4
C04p57470 Brassica napus HOM05D001082 ORTHO05D005120 1.1e-30 138.3 294 31.3
Mapoly0008s0081 Marchantia polymorpha HOM05D001082 ORTHO05D005120 2.5e-30 137.1 323 29.4
CBR_g55210 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-20 104.0 243 29.2
Pp3c11_26590 Physcomitrium patens HOM05D001082 ORTHO05D005120 3.3e-19 100.1 258 27.5
unitig_22.g5790 Utricularia gibba HOM05D001082 ORTHO05D005120 4.5e-16 89.7 217 30.4
Duzib235G1067 Durio zibethinus HOM05D001082 ORTHO05D005120 1.9e-14 84.3 115 34.8
Carub.0001s3160 Capsella rubella HOM05D001082 ORTHO05D005120 7.9e-13 79.0 109 35.8


User provided reference genes

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