Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 0.0e+00 1741.9 906 100.0
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 3.1e-51 208.0 448 31.2
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 4.1e-48 197.6 448 29.5
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 1.7e-46 192.2 431 32.0
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 1.1e-45 189.5 420 31.4
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.9e-45 188.7 420 31.4
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 7.3e-45 186.8 524 30.3
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 7.3e-45 186.8 427 32.8
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 1.2e-44 186.0 424 31.6
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.1e-44 185.3 423 31.0
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 2.8e-44 184.9 423 30.5
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 3.6e-44 184.5 423 31.0
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 1.1e-43 183.0 443 29.3
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 1.8e-43 182.2 441 31.1
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 5.2e-43 180.6 422 31.0
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 1.5e-42 179.1 424 30.4
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 1.5e-42 179.1 426 29.8
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 2.0e-42 178.7 425 30.8
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 2.0e-42 178.7 423 29.8
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 2.0e-42 178.7 473 27.7
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 3.4e-42 177.9 447 29.3
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 4.4e-42 177.6 424 30.4
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 4.4e-42 177.6 492 30.5
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 4.4e-42 177.6 433 30.5
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 7.6e-42 176.8 401 31.7
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 9.9e-42 176.4 427 30.0
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 1.7e-41 175.6 424 28.3
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 2.2e-41 175.3 456 29.4
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 2.9e-41 174.9 423 30.7
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 4.9e-41 174.1 426 30.0
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 8.4e-41 173.3 428 29.7
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 8.4e-41 173.3 475 28.8
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 8.4e-41 173.3 436 29.1
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 1.1e-40 172.9 424 30.9
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 1.1e-40 172.9 445 29.7
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 1.1e-40 172.9 430 30.0
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 1.4e-40 172.6 458 29.0
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 1.9e-40 172.2 467 29.1
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 2.4e-40 171.8 430 28.8
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 4.1e-40 171.0 427 28.8
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 4.1e-40 171.0 464 28.7
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 5.4e-40 170.6 443 30.5
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 5.4e-40 170.6 447 29.3
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 5.4e-40 170.6 453 29.8
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 5.4e-40 170.6 453 27.8
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 7.1e-40 170.2 404 30.9
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 7.1e-40 170.2 423 30.0
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 7.1e-40 170.2 404 31.2
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 9.2e-40 169.9 431 30.2
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 9.2e-40 169.9 447 30.2
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 9.2e-40 169.9 404 31.2
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 1.2e-39 169.5 426 30.3
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 1.2e-39 169.5 426 30.3
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 1.2e-39 169.5 455 28.8
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 1.2e-39 169.5 426 29.8
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 1.6e-39 169.1 431 29.7
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.6e-39 169.1 433 29.8
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 2.1e-39 168.7 458 29.3
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 2.1e-39 168.7 454 28.4
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 2.7e-39 168.3 462 29.2
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 2.7e-39 168.3 422 29.1
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 2.7e-39 168.3 441 29.0
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 2.7e-39 168.3 455 30.3
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 3.5e-39 167.9 420 30.2
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 3.5e-39 167.9 423 30.5
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 4.6e-39 167.5 404 30.7
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 6.0e-39 167.2 419 27.9
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 6.0e-39 167.2 445 29.4
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 6.0e-39 167.2 408 29.9
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 1.0e-38 166.4 447 29.8
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 1.0e-38 166.4 423 28.6
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 1.3e-38 166.0 423 29.6
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.7e-38 165.6 430 30.2
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 1.7e-38 165.6 447 30.0
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 2.3e-38 165.2 436 29.4
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 2.3e-38 165.2 438 29.5
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 3.0e-38 164.9 423 28.4
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 3.9e-38 164.5 455 27.7
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 6.6e-38 163.7 439 28.7
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 8.7e-38 163.3 490 27.6
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 1.1e-37 162.9 428 28.5
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 1.5e-37 162.5 448 29.5
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 1.9e-37 162.2 435 29.2
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 2.5e-37 161.8 437 28.4
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 5.6e-37 160.6 484 28.3
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 7.3e-37 160.2 426 28.6
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 9.6e-37 159.8 453 29.1
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 9.6e-37 159.8 451 28.8
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 1.2e-36 159.5 400 30.0
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 1.6e-36 159.1 432 28.2
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 3.6e-36 157.9 404 30.4
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 4.7e-36 157.5 420 29.0
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 1.1e-35 156.4 504 27.4
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.8e-35 155.6 231 40.7
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 9.0e-35 153.3 499 27.3
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 3.8e-33 147.9 155 47.7
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 4.9e-33 147.5 157 45.9
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 6.4e-33 147.1 157 47.8
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 1.1e-32 146.4 461 26.5
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 1.2e-31 142.9 184 41.8
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 2.7e-31 141.7 478 27.4
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 1.0e-30 139.8 360 29.2
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 3.0e-30 138.3 156 46.2
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 3.3e-29 134.8 465 26.7
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 2.8e-28 131.7 145 49.0
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 1.1e-27 129.8 150 45.3
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 1.1e-27 129.8 150 45.3
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 1.3e-25 122.9 160 38.8
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.4e-24 119.4 125 46.4
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 1.9e-24 119.0 130 46.9
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 3.9e-22 111.3 426 27.2
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 6.2e-20 104.0 143 41.3
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 7.4e-13 80.5 99 40.4
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 2.6e-10 72.0 100 38.0
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.6e-10 72.0 149 35.6
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 2.9e-09 68.6 114 38.6
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 9.3e-08 63.5 67 47.8
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 5.1e-06 57.8 62 41.9
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 5.1e-06 57.8 62 41.9


User provided reference genes

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