Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g906 Chara braunii HOM05D004426 ORTHO05D005417 0.0e+00 5551.1 3480 100.0
Mapoly0014s0197 Marchantia polymorpha HOM05D004426 ORTHO05D005417 1.8e-128 466.5 1911 26.8
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 6.2e-92 345.1 1904 23.9
ATR0665G194 Amborella trichopoda HOM05D004426 ORTHO05D005417 1.8e-91 343.6 1876 24.6
PSO339G1314 Papaver somniferum HOM05D004426 ORTHO05D005417 9.2e-88 331.3 1884 24.0
Pp3c22_17700 Physcomitrium patens HOM05D004426 ORTHO05D005417 9.2e-88 331.3 1857 24.8
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 1.3e-86 327.4 1923 24.4
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 1.7e-86 327.0 1885 24.7
PSO384G1970 Papaver somniferum HOM05D004426 ORTHO05D005417 3.9e-86 325.9 1884 23.8
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 4.3e-85 322.4 1881 23.8
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 8.1e-84 318.2 1894 24.0
Aqoxy1G00646 Aquilegia oxysepala HOM05D004426 ORTHO05D005417 1.1e-83 317.8 1880 24.3
Lj5g0003460 Lotus japonicus HOM05D004426 ORTHO05D005417 1.1e-83 317.8 1863 23.5
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 2.3e-83 316.6 1895 23.5
Thecc.05G105900 Theobroma cacao HOM05D004426 ORTHO05D005417 1.5e-82 313.9 1880 23.8
COL.COLO4_29556 Corchorus olitorius HOM05D004426 ORTHO05D005417 2.6e-82 313.2 1884 23.9
Gorai.009G393700 Gossypium raimondii HOM05D004426 ORTHO05D005417 5.8e-82 312.0 1898 24.1
AagrBONN_evm.TU.Sc2ySwM_368.1933 Anthoceros agrestis HOM05D004426 ORTHO05D005417 4.9e-81 308.9 1574 24.3
Glyma.02G195600 Glycine max HOM05D004426 ORTHO05D005417 5.4e-80 305.4 1359 24.6
Phvul.007G267500 Phaseolus vulgaris HOM05D004426 ORTHO05D005417 6.0e-79 302.0 1877 22.8
TPR.G2812 Trifolium pratense HOM05D004426 ORTHO05D005417 1.7e-78 300.4 1878 23.0
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 1.7e-78 300.4 1890 23.2
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea HOM05D004426 ORTHO05D005417 6.6e-78 298.5 1864 23.0
Glyma.10G082100 Glycine max HOM05D004426 ORTHO05D005417 4.3e-77 295.8 1351 24.7
Actinidia37752 Actinidia chinensis HOM05D004426 ORTHO05D005417 4.7e-76 292.4 1895 24.3
Medtr1g056800 Medicago truncatula HOM05D004426 ORTHO05D005417 4.7e-76 292.4 1354 24.2
Nn6g34673 Nelumbo nucifera HOM05D004426 ORTHO05D005417 1.1e-75 291.2 1898 23.4
AT3G05680 Arabidopsis thaliana HOM05D004426 ORTHO05D005417 2.4e-75 290.0 1891 23.5
Psat6g115600 Pisum sativum HOM05D004426 ORTHO05D005417 3.1e-75 289.7 1380 25.9
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 5.2e-75 288.9 1891 23.4
Dinv31767 Davidia involucrata HOM05D004426 ORTHO05D005417 1.2e-74 287.7 1355 24.7
CSS0032246 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 5.8e-74 285.4 1351 24.9
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 5.8e-74 285.4 1896 24.1
Cc06_g06650 Coffea canephora HOM05D004426 ORTHO05D005417 7.6e-74 285.0 1877 23.7
THA.LOC104816640 Tarenaya hassleriana HOM05D004426 ORTHO05D005417 7.6e-74 285.0 1900 23.4
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.3e-73 284.3 1921 23.8
CSS0006601 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 1.7e-73 283.9 1351 24.8
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 1.7e-73 283.9 1905 23.3
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 1.7e-73 283.9 1910 23.2
Dinv12344 Davidia involucrata HOM05D004426 ORTHO05D005417 2.9e-73 283.1 1884 23.5
Ca_11691_v3 Cicer arietinum L. HOM05D004426 ORTHO05D005417 2.4e-72 280.0 1889 23.0
TWI74G0602 Tripterygium wilfordii HOM05D004426 ORTHO05D005417 3.2e-72 279.6 1911 23.2
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 4.2e-72 279.3 1894 23.7
DCAR_020696 Daucus carota HOM05D004426 ORTHO05D005417 4.2e-72 279.3 1888 23.5
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea HOM05D004426 ORTHO05D005417 5.4e-72 278.9 1865 22.8
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 9.3e-72 278.1 1924 23.6
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.6e-71 277.3 1927 23.7
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 1.6e-71 277.3 1365 24.0
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 2.1e-71 276.9 1896 24.1
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 2.7e-71 276.6 1887 23.5
Oeu035645.2 Olea europaea HOM05D004426 ORTHO05D005417 6.0e-71 275.4 1874 23.0
Lalb_Chr06g0172651 Lupinus albus HOM05D004426 ORTHO05D005417 7.8e-71 275.0 1277 24.7
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 1.3e-70 274.2 1886 23.8
MD12G1041400 Malus domestica HOM05D004426 ORTHO05D005417 1.7e-70 273.9 1355 23.0
Manes.09G046200 Manihot esculenta HOM05D004426 ORTHO05D005417 5.1e-70 272.3 1265 23.9
Eucgr.A02578 Eucalyptus grandis HOM05D004426 ORTHO05D005417 3.6e-68 266.2 1896 24.4
C03p41680 Brassica napus HOM05D004426 ORTHO05D005417 4.8e-68 265.8 1887 22.5
MD14G1040500 Malus domestica HOM05D004426 ORTHO05D005417 4.8e-68 265.8 1896 22.8
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 6.2e-68 265.4 1901 23.2
BolC3t16451H Brassica oleracea HOM05D004426 ORTHO05D005417 8.1e-68 265.0 1897 23.0
VMungo0720G0551 Vigna mungo HOM05D004426 ORTHO05D005417 1.1e-67 264.6 1212 24.0
Nitab4.5_0004363g0030 Nicotiana tabacum HOM05D004426 ORTHO05D005417 1.4e-67 264.2 1891 23.4
Sp3g04560 Schrenkiella parvula HOM05D004426 ORTHO05D005417 9.0e-67 261.5 1887 23.1
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 1.2e-66 261.2 1880 22.7
Sopen03g029610 Solanum pennellii HOM05D004426 ORTHO05D005417 1.2e-66 261.2 1887 22.9
BcaB04g19244 Brassica carinata HOM05D004426 ORTHO05D005417 1.5e-66 260.8 1886 22.5
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 2.0e-66 260.4 1879 23.1
Carub.0003s0502 Capsella rubella HOM05D004426 ORTHO05D005417 7.6e-66 258.5 1904 23.2
Solyc03g020020.3 Solanum lycopersicum HOM05D004426 ORTHO05D005417 7.6e-66 258.5 1893 22.8
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 1.3e-65 257.7 1887 22.6
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 2.9e-65 256.5 1904 23.1
vmacro07479 Vaccinium macrocarpon HOM05D004426 ORTHO05D005417 2.9e-65 256.5 1910 23.5
MSTRG.5892 Avicennia marina HOM05D004426 ORTHO05D005417 4.9e-65 255.8 1903 22.6
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 8.4e-65 255.0 1881 22.2
HPP92_005908 Vanilla planifolia HOM05D004426 ORTHO05D005417 1.9e-64 253.8 1911 23.1
Lsat_1_v5_gn_6_33801 Lactuca sativa HOM05D004426 ORTHO05D005417 4.2e-64 252.7 1294 24.4
Nitab4.5_0001495g0100 Nicotiana tabacum HOM05D004426 ORTHO05D005417 4.2e-64 252.7 1905 22.7
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.6e-63 250.8 1949 22.9
EL10Ac5g11771 Beta vulgaris HOM05D004426 ORTHO05D005417 2.7e-63 250.0 1285 23.9
SGA_v2.0_scaffold115G32146 Striga asiatica HOM05D004426 ORTHO05D005417 4.6e-63 249.2 1536 23.4
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 6.0e-63 248.8 1887 22.3
Aa31LG5G16100 Aethionema arabicum HOM05D004426 ORTHO05D005417 1.0e-62 248.1 1879 22.7
ECA233G4189 Erigeron canadensis HOM05D004426 ORTHO05D005417 3.9e-62 246.1 1299 23.7
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 5.1e-62 245.7 1485 24.1
Migut.J00694 Erythranthe guttata HOM05D004426 ORTHO05D005417 1.1e-61 244.6 1381 23.6
HanXRQChr13g0398531 Helianthus annuus HOM05D004426 ORTHO05D005417 1.9e-61 243.8 1366 23.8
Gohir.A04G053650 Gossypium hirsutum HOM05D004426 ORTHO05D005417 7.4e-61 241.9 1549 23.8
Gohir.D04G091700 Gossypium hirsutum HOM05D004426 ORTHO05D005417 4.8e-60 239.2 1546 23.9
AUR62040133 Chenopodium quinoa HOM05D004426 ORTHO05D005417 1.8e-59 237.3 1825 23.2
Oeu036110.1 Olea europaea HOM05D004426 ORTHO05D005417 2.4e-59 236.9 1315 23.7
Zm00001eb220020 Zea mays HOM05D004426 ORTHO05D005417 4.0e-59 236.1 1874 22.4
Peaxi162Scf00171g00133 Petunia axillaris HOM05D004426 ORTHO05D005417 9.0e-59 235.0 1388 23.7
Haze_20160 Corylus avellana HOM05D004426 ORTHO05D005417 4.2e-56 226.1 1319 22.5
Sc22g0002960 Simmondsia chinensis HOM05D004426 ORTHO05D005417 5.5e-56 225.7 1358 23.1
AUR62027347 Chenopodium quinoa HOM05D004426 ORTHO05D005417 1.2e-50 208.0 1303 23.0
Ah.12g059670 Amaranthus hybridus HOM05D004426 ORTHO05D005417 1.5e-50 207.6 1872 22.2
Lj1A1205T55 Lonicera japonica HOM05D004426 ORTHO05D005417 2.2e-41 177.2 918 24.1
SEGI_03524 Sequoiadendron giganteum HOM05D004426 ORTHO05D005417 2.7e-31 143.7 478 27.6
SHI25008 Sapria himalayana HOM05D004426 ORTHO05D000002 3.9e-30 139.8 1187 21.5
CDE04G2905 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 1.1e-27 131.7 506 25.9
MBI03_g28304_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 1.8e-27 131.0 1107 23.5
MBI03_g28305_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 2.2e-20 107.5 127 40.2
CDE07G0146 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 4.1e-19 103.2 125 40.8
Actinidia03882 Actinidia chinensis HOM05D004426 ORTHO05D005417 3.5e-18 100.1 125 37.6
Cpa.g.sc104.20 Carica papaya HOM05D004426 ORTHO05D005417 1.2e-15 91.7 121 38.8
FAN14G5903 Fragaria x ananassa HOM05D004426 ORTHO05D005417 4.7e-15 89.7 1035 22.9
SEGI_22283 Sequoiadendron giganteum HOM05D004426 ORTHO05D005417 1.8e-14 87.8 888 23.1
unitig_578.g15811 Utricularia gibba HOM05D004426 ORTHO05D005417 2.6e-13 84.0 503 24.3
FAN09G0172 Fragaria x ananassa HOM05D004426 ORTHO05D005417 3.3e-13 83.6 894 24.2
PGSC0003DMG400015284 Solanum tuberosum HOM05D004426 ORTHO05D005417 1.4e-11 78.2 315 24.8
Mapoly0074s0069 Marchantia polymorpha HOM05D004426 ORTHO05D005417 5.3e-11 76.3 132 37.1
RcHm_v2.0_Chr3g0476171 Rosa chinensis HOM05D004426 ORTHO05D005417 1.2e-10 75.1 210 24.8
CDE07G0138 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 1.6e-10 74.7 288 27.4
Lj1A1205G57 Lonicera japonica HOM05D004426 ORTHO05D005417 3.5e-10 73.6 937 21.5
Duzib093G0602 Durio zibethinus HOM05D004426 ORTHO05D005417 1.7e-09 71.2 416 23.6
Actinidia03991 Actinidia chinensis HOM05D004426 ORTHO05D005417 9.4e-08 65.5 98 33.7
CDE04G3616 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 6.8e-06 59.3 157 28.0
TPR.G15240 Trifolium pratense HOM05D004426 ORTHO05D005417 6.8e-06 59.3 35 80.0


User provided reference genes

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