Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g7996 Chara braunii HOM05D002281 ORTHO05D006774 0.0e+00 1897.9 1057 100.0
Mapoly0031s0123 Marchantia polymorpha HOM05D002281 ORTHO05D006774 7.0e-164 582.4 818 40.8
AagrBONN_evm.TU.Sc2ySwM_368.3437 Anthoceros agrestis HOM05D002281 ORTHO05D006774 9.4e-161 572.0 811 40.4
GSVIVG01026351001 Vitis vinifera HOM05D002281 ORTHO05D006774 3.1e-148 530.4 680 43.7
BcaC09g47811 Brassica carinata HOM05D002281 ORTHO05D006774 3.5e-147 526.9 862 37.0
Nitab4.5_0006530g0020 Nicotiana tabacum HOM05D002281 ORTHO05D006774 5.9e-147 526.2 693 43.0
COL.COLO4_38180 Corchorus olitorius HOM05D002281 ORTHO05D006774 1.3e-146 525.0 828 37.8
Sp3g03170 Schrenkiella parvula HOM05D002281 ORTHO05D006774 2.9e-146 523.9 850 37.2
Thhalv10020015m.g Eutrema salsugineum HOM05D002281 ORTHO05D006774 3.8e-146 523.5 841 37.8
Gohir.A13G103100 Gossypium hirsutum HOM05D002281 ORTHO05D006774 3.8e-146 523.5 818 39.0
AL3G14240 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 5.0e-146 523.1 844 37.3
Gorai.013G119100 Gossypium raimondii HOM05D002281 ORTHO05D006774 5.0e-146 523.1 818 39.2
Oeu001246.1 Olea europaea HOM05D002281 ORTHO05D006774 5.0e-146 523.1 838 38.2
MSTRG.27429 Avicennia marina HOM05D002281 ORTHO05D006774 6.6e-146 522.7 836 37.2
TPR.G31600 Trifolium pratense HOM05D002281 ORTHO05D006774 6.6e-146 522.7 817 37.0
Gohir.D13G106200 Gossypium hirsutum HOM05D002281 ORTHO05D006774 1.5e-145 521.5 818 39.0
TWI60G1049 Tripterygium wilfordii HOM05D002281 ORTHO05D006774 1.5e-145 521.5 675 43.4
BraA01t04526Z Brassica rapa HOM05D002281 ORTHO05D006774 1.9e-145 521.2 861 37.4
CAN.G131.14 Capsicum annuum HOM05D002281 ORTHO05D006774 2.5e-145 520.8 837 37.4
BcaNung04817 Brassica carinata HOM05D002281 ORTHO05D006774 3.3e-145 520.4 715 41.1
Nitab4.5_0001498g0040 Nicotiana tabacum HOM05D002281 ORTHO05D006774 3.3e-145 520.4 689 41.8
Carub.0003s0347 Capsella rubella HOM05D002281 ORTHO05D006774 4.2e-145 520.0 850 37.1
AT3G04260 Arabidopsis thaliana HOM05D002281 ORTHO05D006774 7.2e-145 519.2 856 36.8
CARHR078410 Cardamine hirsuta HOM05D002281 ORTHO05D006774 9.5e-145 518.8 845 37.2
Actinidia06827 Actinidia chinensis HOM05D002281 ORTHO05D006774 2.8e-144 517.3 669 43.3
Aqoxy2G03815 Aquilegia oxysepala HOM05D002281 ORTHO05D006774 3.6e-144 516.9 696 43.8
Nn3g19861 Nelumbo nucifera HOM05D002281 ORTHO05D006774 3.6e-144 516.9 694 42.5
Pp3c1_8170 Physcomitrium patens HOM05D002281 ORTHO05D006774 3.6e-144 516.9 836 38.4
PGR142G3453 Punica granatum HOM05D002281 ORTHO05D006774 4.7e-144 516.5 684 43.0
DCAR_027530 Daucus carota HOM05D002281 ORTHO05D006774 6.1e-144 516.2 797 38.4
Lalb_Chr21g0311311 Lupinus albus HOM05D002281 ORTHO05D006774 6.1e-144 516.2 693 42.1
HanXRQChr14g0434631 Helianthus annuus HOM05D002281 ORTHO05D006774 8.0e-144 515.8 824 37.9
Psat6g141840 Pisum sativum HOM05D002281 ORTHO05D006774 3.0e-143 513.8 709 40.6
Solyc04g050540.4 Solanum lycopersicum HOM05D002281 ORTHO05D006774 3.0e-143 513.8 692 42.2
ECA238G3638 Erigeron canadensis HOM05D002281 ORTHO05D006774 6.8e-143 512.7 678 42.9
Eucgr.B02168 Eucalyptus grandis HOM05D002281 ORTHO05D006774 8.9e-143 512.3 692 42.1
Thecc.05G264900 Theobroma cacao HOM05D002281 ORTHO05D006774 8.9e-143 512.3 827 37.7
THA.LOC104820754 Tarenaya hassleriana HOM05D002281 ORTHO05D006774 1.2e-142 511.9 844 36.6
Sopen04g021370 Solanum pennellii HOM05D002281 ORTHO05D006774 1.5e-142 511.5 697 41.8
SEGI_16679 Sequoiadendron giganteum HOM05D002281 ORTHO05D006774 2.6e-142 510.8 690 39.6
MD04G1234900 Malus domestica HOM05D002281 ORTHO05D006774 3.4e-142 510.4 684 43.0
Migut.F02048 Erythranthe guttata HOM05D002281 ORTHO05D006774 4.4e-142 510.0 703 42.2
Manes.09G145600 Manihot esculenta HOM05D002281 ORTHO05D006774 4.4e-142 510.0 680 42.2
Ca_09982_v3 Cicer arietinum L. HOM05D002281 ORTHO05D006774 5.7e-142 509.6 701 40.5
Aa31LG5G14740 Aethionema arabicum HOM05D002281 ORTHO05D006774 7.5e-142 509.2 849 36.6
Phvul.L002432 Phaseolus vulgaris HOM05D002281 ORTHO05D006774 1.7e-141 508.1 673 41.6
SGA_v2.0_scaffold62G21474 Striga asiatica HOM05D002281 ORTHO05D006774 1.7e-141 508.1 674 42.6
Os10g0462800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D006774 2.2e-141 507.7 683 42.2
Glyma.20G221100 Glycine max HOM05D002281 ORTHO05D006774 1.1e-140 505.4 667 41.5
Lsat_1_v5_gn_2_16580 Lactuca sativa HOM05D002281 ORTHO05D006774 1.1e-140 505.4 826 37.0
Lj5g0010111 Lotus japonicus HOM05D002281 ORTHO05D006774 1.1e-140 505.4 688 40.1
Sed0014107 Sechium edule HOM05D002281 ORTHO05D006774 2.4e-140 504.2 703 41.0
CsaV3_1G044940 Cucumis sativus L. HOM05D002281 ORTHO05D006774 4.1e-140 503.4 726 40.6
Glyma.10G168600 Glycine max HOM05D002281 ORTHO05D006774 7.0e-140 502.7 686 40.8
Medtr1g079525 Medicago truncatula HOM05D002281 ORTHO05D006774 7.0e-140 502.7 699 41.2
PSO017G1794 Papaver somniferum HOM05D002281 ORTHO05D006774 7.0e-140 502.7 688 41.3
VMungo0720G2591 Vigna mungo HOM05D002281 ORTHO05D006774 1.6e-139 501.5 672 40.8
FvH4_6g01350 Fragaria vesca HOM05D002281 ORTHO05D006774 2.7e-139 500.7 696 40.7
PSO063G1810 Papaver somniferum HOM05D002281 ORTHO05D006774 2.7e-139 500.7 688 40.8
Zm00001eb046590 Zea mays HOM05D002281 ORTHO05D006774 2.7e-139 500.7 673 43.2
ATR0787G153 Amborella trichopoda HOM05D002281 ORTHO05D006774 4.5e-139 500.0 684 42.1
MELO3C010108.2 Cucumis melo HOM05D002281 ORTHO05D006774 4.5e-139 500.0 715 40.6
CSS0040843 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 7.8e-139 499.2 687 42.5
RcHm_v2.0_Chr3g0448921 Rosa chinensis HOM05D002281 ORTHO05D006774 7.8e-139 499.2 706 40.7
Atru.chr2.1137 Acer truncatum HOM05D002281 ORTHO05D006774 1.7e-138 498.0 832 36.4
Cfa006305 Carpinus fangiana HOM05D002281 ORTHO05D006774 3.9e-138 496.9 689 42.1
Ciclev10023441m.g Citrus clementina HOM05D002281 ORTHO05D006774 3.9e-138 496.9 693 40.4
CANSAT54G2391 Cannabis sativa HOM05D002281 ORTHO05D006774 6.6e-138 496.1 708 41.4
Prupe.6G354700 Prunus persica HOM05D002281 ORTHO05D006774 1.5e-137 495.0 812 37.4
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea HOM05D002281 ORTHO05D006774 3.3e-137 493.8 710 40.3
Potri.019G025100 Populus trichocarpa HOM05D002281 ORTHO05D006774 4.3e-137 493.4 681 41.0
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 5.6e-137 493.0 715 39.9
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 7.3e-137 492.7 692 42.2
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 7.3e-137 492.7 713 40.0
Lj2C48G13 Lonicera japonica HOM05D002281 ORTHO05D006774 1.2e-136 491.9 672 41.5
Peaxi162Scf00071g00258 Petunia axillaris HOM05D002281 ORTHO05D006774 1.2e-136 491.9 692 41.2
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 2.1e-136 491.1 696 42.0
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 2.8e-136 490.7 693 42.1
TAR365G0274 Trochodendron aralioides HOM05D002281 ORTHO05D006774 2.8e-136 490.7 674 43.2
SMO367G1266 Selaginella moellendorffii HOM05D002281 ORTHO05D006774 1.0e-135 488.8 819 36.5
AUR62000641 Chenopodium quinoa HOM05D002281 ORTHO05D006774 7.5e-134 482.6 824 35.3
Hund07166 Selenicereus undatus HOM05D002281 ORTHO05D006774 1.0e-130 472.2 832 35.3
Sc16g0010030 Simmondsia chinensis HOM05D002281 ORTHO05D006774 2.8e-128 464.2 632 41.9
unitig_899.g14420 Utricularia gibba HOM05D002281 ORTHO05D006774 9.8e-126 455.7 835 35.1
A01p40910 Brassica napus HOM05D002281 ORTHO05D006774 1.0e-122 445.7 749 36.6
BNapus_Darmor_BZH_scaffold_78p00800 Brassica napus HOM05D002281 ORTHO05D006774 1.0e-122 445.7 749 36.6
Dinv05783 Davidia involucrata HOM05D002281 ORTHO05D006774 1.1e-121 442.2 829 34.3
AUR62006996 Chenopodium quinoa HOM05D002281 ORTHO05D006774 1.9e-121 441.4 684 38.9
EL10Ac4g09786 Beta vulgaris HOM05D002281 ORTHO05D006774 3.3e-121 440.7 692 38.2
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea HOM05D002281 ORTHO05D006774 9.9e-118 429.1 710 38.2
Sabra19G0034700 Salix brachista HOM05D002281 ORTHO05D006774 6.4e-117 426.4 688 38.2
Hma1.2p1_0123F.1_g058110 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 8.3e-117 426.0 568 42.6
Sabra19G0037700 Salix brachista HOM05D002281 ORTHO05D006774 3.8e-109 400.6 621 39.9
HPP92_025553 Vanilla planifolia HOM05D002281 ORTHO05D006774 2.5e-105 387.9 836 34.0
Hma1.2p1_0123F.1_g058100 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 3.8e-101 374.0 535 40.4
CiPaw.07G076800 Carya illinoinensis HOM05D002281 ORTHO05D006774 1.5e-89 335.5 476 38.4
ClCG03G011380 Citrullus lanatus HOM05D002281 ORTHO05D006774 5.3e-87 327.0 529 39.1
Cc09_g03090 Coffea canephora HOM05D002281 ORTHO05D006774 1.3e-85 322.4 353 45.9
CDE02G2074 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 3.0e-74 284.6 495 36.2
Haze_04484 Corylus avellana HOM05D002281 ORTHO05D006774 2.0e-70 271.9 559 36.5
Rhsim05G0169000 Rhododendron simsii HOM05D002281 ORTHO05D006774 4.2e-68 264.2 452 38.5
vmacro19967 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 2.0e-62 245.4 475 36.0
Cc00_g32050 Coffea canephora HOM05D002281 ORTHO05D006774 5.5e-52 210.7 374 39.6
QL03p033056 Quercus lobata HOM05D002281 ORTHO05D006774 8.8e-50 203.4 202 54.5
CiPaw.07G076900 Carya illinoinensis HOM05D002281 ORTHO05D006774 1.6e-27 129.4 165 40.6
CDE02G1511 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 2.8e-27 128.6 114 46.5
Cpa.g.sc51.36 Carica papaya HOM05D002281 ORTHO05D006774 3.0e-26 125.2 180 37.2
ClCG03G011370 Citrullus lanatus HOM05D002281 ORTHO05D006774 2.6e-25 122.1 112 50.9
vmacro19968 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 5.7e-25 120.9 102 53.9
AL685U10020 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 1.8e-18 99.4 128 42.2
Actinidia39977 Actinidia chinensis HOM05D002281 ORTHO05D006774 4.0e-18 98.2 90 50.0
Cpa.g.sc51.35 Carica papaya HOM05D002281 ORTHO05D006774 1.3e-16 93.2 77 51.9
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.9e-15 89.4 150 36.0
QL03p032920 Quercus lobata HOM05D002281 ORTHO05D006774 1.9e-12 79.3 94 41.5
QL03p033074 Quercus lobata HOM05D002281 ORTHO05D006774 4.7e-11 74.7 86 41.9
vmacro19969 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 5.8e-09 67.8 79 38.0
Cpa.g.sc51.34 Carica papaya HOM05D002281 ORTHO05D006774 1.3e-08 66.6 63 42.9
RcHm_v2.0_Chr1g0330901 Rosa chinensis HOM05D002281 ORTHO05D006774 3.7e-08 65.1 66 48.5
Solyc01g016930.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 6.4e-08 64.3 77 45.5
Solyc01g016870.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.1e-07 63.5 57 57.9
Sopen01g022760 Solanum pennellii HOM05D002281 ORTHO05D006774 1.9e-07 62.8 145 36.6
Solyc01g016920.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 4.1e-07 61.6 53 56.6


User provided reference genes

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