Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g757 Chara braunii HOM05D000032 ORTHO05D007039 1.6e-142 510.0 380 100.0
Nn2g15381 Nelumbo nucifera HOM05D000032 ORTHO05D007039 5.1e-32 142.9 275 36.7
Pp3c14_6810 Physcomitrium patens HOM05D000032 ORTHO05D007039 2.1e-30 137.5 267 36.3
MELO3C017528.2 Cucumis melo HOM05D000032 ORTHO05D007039 4.8e-30 136.3 254 36.6
CsaV3_1G045380 Cucumis sativus L. HOM05D000032 ORTHO05D007039 8.1e-30 135.6 248 37.1
AagrBONN_evm.TU.Sc2ySwM_228.4830 Anthoceros agrestis HOM05D000032 ORTHO05D007039 1.1e-29 135.2 272 36.8
SMO361G0757 Selaginella moellendorffii HOM05D000032 ORTHO05D007039 5.3e-29 132.9 275 36.0
ClCG10G008660 Citrullus lanatus HOM05D000032 ORTHO05D007039 1.5e-28 131.3 252 36.5
Sed0020079 Sechium edule HOM05D000032 ORTHO05D007039 1.5e-28 131.3 270 35.9
Lj3g0011799 Lotus japonicus HOM05D000032 ORTHO05D007039 2.6e-28 130.6 252 33.7
DCAR_014397 Daucus carota HOM05D000032 ORTHO05D007039 3.4e-28 130.2 260 34.2
Glyma.16G221700 Glycine max HOM05D000032 ORTHO05D007039 3.4e-28 130.2 255 34.1
SMO361G0600 Selaginella moellendorffii HOM05D000032 ORTHO05D007039 3.4e-28 130.2 278 35.3
TAR381G0052 Trochodendron aralioides HOM05D000032 ORTHO05D007039 4.4e-28 129.8 251 35.9
Cpa.g.sc26.76 Carica papaya HOM05D000032 ORTHO05D007039 5.8e-28 129.4 251 33.9
GSVIVG01009983001 Vitis vinifera HOM05D000032 ORTHO05D007039 9.9e-28 128.6 247 36.4
Mapoly0165s0019 Marchantia polymorpha HOM05D000032 ORTHO05D007039 1.7e-27 127.9 254 35.8
Eucgr.F02760 Eucalyptus grandis HOM05D000032 ORTHO05D007039 2.2e-27 127.5 251 33.5
Manes.04G035200 Manihot esculenta HOM05D000032 ORTHO05D007039 2.9e-27 127.1 260 34.6
vmacro05140 Vaccinium macrocarpon HOM05D000032 ORTHO05D007039 2.9e-27 127.1 273 33.7
COL.COLO4_35483 Corchorus olitorius HOM05D000032 ORTHO05D007039 3.8e-27 126.7 255 34.5
VMungo0331G2050 Vigna mungo HOM05D000032 ORTHO05D007039 3.8e-27 126.7 252 32.9
arahy.Tifrunner.gnm1.ann1.KPVC5H Arachis hypogaea HOM05D000032 ORTHO05D007039 4.9e-27 126.3 251 34.3
Duzib041G0456 Durio zibethinus HOM05D000032 ORTHO05D007039 6.4e-27 125.9 279 33.7
CiPaw.16G019200 Carya illinoinensis HOM05D000032 ORTHO05D007039 8.4e-27 125.6 256 33.6
TWI32G0140 Tripterygium wilfordii HOM05D000032 ORTHO05D007039 1.4e-26 124.8 251 31.9
Ca_18908_v3 Cicer arietinum L. HOM05D000032 ORTHO05D007039 1.9e-26 124.4 255 34.5
Lj4A689G43 Lonicera japonica HOM05D000032 ORTHO05D007039 1.9e-26 124.4 255 34.5
Aqoxy5G02326 Aquilegia oxysepala HOM05D000032 ORTHO05D007039 2.4e-26 124.0 280 35.0
Gohir.D02G075100 Gossypium hirsutum HOM05D000032 ORTHO05D007039 2.4e-26 124.0 261 34.1
PSO017G0672 Papaver somniferum HOM05D000032 ORTHO05D007039 2.4e-26 124.0 276 33.0
PSO478G2531 Papaver somniferum HOM05D000032 ORTHO05D007039 3.2e-26 123.6 276 33.0
MBI02_g35824_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D007039 4.2e-26 123.2 253 33.2
Phvul.010G059900 Phaseolus vulgaris HOM05D000032 ORTHO05D007039 4.2e-26 123.2 252 32.9
Glyma.03G001200 Glycine max HOM05D000032 ORTHO05D007039 5.4e-26 122.9 252 32.1
Hma1.2p1_0107F.1_g051290 Hydrangea macrophylla HOM05D000032 ORTHO05D007039 5.4e-26 122.9 252 33.3
Hund17378 Selenicereus undatus HOM05D000032 ORTHO05D007039 5.4e-26 122.9 258 32.9
AT1G77030 Arabidopsis thaliana HOM05D000032 ORTHO05D007039 7.1e-26 122.5 256 30.9
Gorai.005G084500 Gossypium raimondii HOM05D000032 ORTHO05D007039 9.3e-26 122.1 261 33.7
Rhsim07G0177900 Rhododendron simsii HOM05D003181 ORTHO05D007039 9.3e-26 122.1 254 34.6
THA.LOC104812064 Tarenaya hassleriana HOM05D000032 ORTHO05D007039 9.3e-26 122.1 272 33.5
AL2G37210 Arabidopsis lyrata HOM05D000032 ORTHO05D007039 1.2e-25 121.7 209 34.0
Aa31LG4G7090 Aethionema arabicum HOM05D000032 ORTHO05D007039 1.6e-25 121.3 272 31.6
Ciclev10000341m.g Citrus clementina HOM05D000032 ORTHO05D007039 1.6e-25 121.3 255 32.9
BcaNung04681 Brassica carinata HOM05D000032 ORTHO05D007039 2.1e-25 120.9 272 33.1
FAN24G0655 Fragaria x ananassa HOM05D000032 ORTHO05D007039 2.1e-25 120.9 276 40.9
Lju3549A0T30 Lonicera japonica HOM05D000032 ORTHO05D007039 2.1e-25 120.9 254 33.5
TPR.G34855 Trifolium pratense HOM05D000032 ORTHO05D007039 2.1e-25 120.9 278 33.1
HanXRQChr15g0473601 Helianthus annuus HOM05D000032 ORTHO05D007039 2.7e-25 120.6 255 32.5
Psat7g166920 Pisum sativum HOM05D000032 ORTHO05D007039 2.7e-25 120.6 254 33.5
QL09p029474 Quercus lobata HOM05D000032 ORTHO05D007039 3.5e-25 120.2 254 32.3
Thecc.08G139100 Theobroma cacao HOM05D000032 ORTHO05D007039 3.5e-25 120.2 251 33.1
Actinidia10684 Actinidia chinensis HOM05D000032 ORTHO05D007039 4.6e-25 119.8 195 35.9
Haze_01423 Corylus avellana HOM05D000032 ORTHO05D007039 4.6e-25 119.8 254 32.7
Thhalv10018119m.g Eutrema salsugineum HOM05D000032 ORTHO05D007039 4.6e-25 119.8 209 34.9
MBI03_g28958_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D007039 4.6e-25 119.8 253 32.8
FvH4_2g15160 Fragaria vesca HOM05D000032 ORTHO05D007039 6.0e-25 119.4 276 40.6
Lalb_Chr13g0294911 Lupinus albus HOM05D000032 ORTHO05D007039 6.0e-25 119.4 284 33.1
MD07G1108300 Malus domestica HOM05D000032 ORTHO05D007039 6.0e-25 119.4 251 36.3
HPP92_015492 Vanilla planifolia HOM05D000032 ORTHO05D007039 6.0e-25 119.4 277 31.4
BcaB02g07095 Brassica carinata HOM05D000032 ORTHO05D007039 7.8e-25 119.0 199 37.7
CARHR070560 Cardamine hirsuta HOM05D000032 ORTHO05D007039 7.8e-25 119.0 271 30.3
Potri.005G185900 Populus trichocarpa HOM05D000032 ORTHO05D007039 7.8e-25 119.0 252 33.3
Medtr4g079320 Medicago truncatula HOM05D000032 ORTHO05D007039 1.0e-24 118.6 273 34.8
SalBow6G7032 Salvia bowleyana HOM05D000032 ORTHO05D007039 1.3e-24 118.2 254 33.9
arahy.Tifrunner.gnm1.ann1.5XB3VI Arachis hypogaea HOM05D000032 ORTHO05D007039 1.7e-24 117.9 275 31.6
Gohir.A02G068600 Gossypium hirsutum HOM05D000032 ORTHO05D007039 1.7e-24 117.9 261 32.2
Sabra05G0142000 Salix brachista HOM05D001345 ORTHO05D007039 3.0e-24 117.1 250 34.0
Cfa015213 Carpinus fangiana HOM05D000032 ORTHO05D007039 3.9e-24 116.7 279 32.3
ECA248G0200 Erigeron canadensis HOM05D000032 ORTHO05D007039 3.9e-24 116.7 249 33.7
BcaB02g07093 Brassica carinata HOM05D000032 ORTHO05D007039 5.1e-24 116.3 260 32.3
BolC6t38280H Brassica oleracea HOM05D000032 ORTHO05D007039 5.1e-24 116.3 260 32.3
A07p28090 Brassica napus HOM05D000032 ORTHO05D007039 8.7e-24 115.5 260 32.3
Dinv25780 Davidia involucrata HOM05D000032 ORTHO05D007039 1.1e-23 115.2 249 33.7
BraA07t30454Z Brassica rapa HOM05D000032 ORTHO05D007039 1.5e-23 114.8 260 31.9
CDE11G0771 Ceratophyllum demersum HOM05D000032 ORTHO05D007039 1.5e-23 114.8 252 32.1
Oeu045989.1 Olea europaea HOM05D000032 ORTHO05D007039 1.5e-23 114.8 255 31.8
PGR042G3397 Punica granatum HOM05D000032 ORTHO05D007039 1.9e-23 114.4 249 33.7
Sp5g32190 Schrenkiella parvula HOM05D000032 ORTHO05D007039 3.3e-23 113.6 193 34.7
ATR0584G252 Amborella trichopoda HOM05D000032 ORTHO05D007039 4.3e-23 113.2 213 37.1
Cc00_g22660 Coffea canephora HOM05D000032 ORTHO05D007039 4.3e-23 113.2 196 34.7
Migut.N03249 Erythranthe guttata HOM05D000032 ORTHO05D007039 4.3e-23 113.2 316 32.6
FAN15G1637 Fragaria x ananassa HOM05D000032 ORTHO05D007039 4.3e-23 113.2 252 42.1
FAN20G1738 Fragaria x ananassa HOM05D001345 ORTHO05D007039 4.3e-23 113.2 277 31.4
Peaxi162Scf00066g01631 Petunia axillaris HOM05D000032 ORTHO05D007039 5.6e-23 112.8 243 32.9
Solyc10g009070.3 Solanum lycopersicum HOM05D000032 ORTHO05D007039 5.6e-23 112.8 265 34.0
Sopen10g004850 Solanum pennellii HOM05D000032 ORTHO05D007039 5.6e-23 112.8 265 34.0
CAN.G313.11 Capsicum annuum HOM05D000032 ORTHO05D007039 7.3e-23 112.5 242 33.9
RcHm_v2.0_Chr6g0277821 Rosa chinensis HOM05D000032 ORTHO05D007039 7.3e-23 112.5 251 40.6
Zm00001eb179010 Zea mays HOM05D000032 ORTHO05D007039 9.6e-23 112.1 200 37.0
C06p31480 Brassica napus HOM05D000032 ORTHO05D007039 1.3e-22 111.7 261 31.8
Carub.0002s2395 Capsella rubella HOM05D000032 ORTHO05D007039 1.3e-22 111.7 209 31.6
Lsat_1_v5_gn_1_39880 Lactuca sativa HOM05D000703 ORTHO05D007039 1.6e-22 111.3 255 31.0
FAN27G2140 Fragaria x ananassa HOM05D000032 ORTHO05D007039 3.6e-22 110.2 271 31.4
CANSAT80G2781 Cannabis sativa HOM05D000032 ORTHO05D007039 4.8e-22 109.8 181 32.0
CDE05G3385 Ceratophyllum demersum HOM05D000032 ORTHO05D007039 8.1e-22 109.0 253 29.2
Glyma.16G116400 Glycine max HOM05D000032 ORTHO05D007039 8.1e-22 109.0 141 39.0
Os08g0416100 Oryza sativa ssp. japonica HOM05D000032 ORTHO05D007039 1.4e-21 108.2 282 31.6
SHI09252 Sapria himalayana HOM05D000032 ORTHO05D007039 1.4e-21 108.2 258 30.6
SGA_v2.0_scaffold25G11147 Striga asiatica HOM05D000032 ORTHO05D007039 1.4e-21 108.2 213 32.4
Prupe.2G131100 Prunus persica HOM05D000032 ORTHO05D007039 1.8e-21 107.8 251 31.9
unitig_52.g17544 Utricularia gibba HOM05D000032 ORTHO05D007039 2.4e-21 107.5 209 33.5
CSS0036844 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D007039 1.2e-20 105.1 219 32.9
EL10Ac1g01414 Beta vulgaris HOM05D000032 ORTHO05D007039 1.5e-20 104.8 169 33.1
SEGI_17341 Sequoiadendron giganteum HOM05D000032 ORTHO05D007039 3.8e-19 100.1 171 38.0
Nitab4.5_0003942g0070 Nicotiana tabacum HOM05D000032 ORTHO05D007039 1.1e-18 98.6 265 29.8
BcaNung04684 Brassica carinata HOM05D000032 ORTHO05D007039 1.2e-17 95.1 229 33.2
AUR62013465 Chenopodium quinoa HOM05D000032 ORTHO05D007039 1.8e-16 91.3 252 31.0
AUR62007669 Chenopodium quinoa HOM05D000032 ORTHO05D007039 1.5e-15 88.2 181 34.3
Nitab4.5_0003348g0030 Nicotiana tabacum HOM05D000032 ORTHO05D007039 2.4e-13 80.9 167 33.5
PRCOL_00001178 Prasinoderma coloniale HOM05D000032 ORTHO05D007039 1.8e-08 64.7 214 29.0


User provided reference genes

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