Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g71889 Chara braunii HOM05D006809 ORTHO05D008609 4.0e-37 157.5 77 100.0
Mapoly0118s0024 Marchantia polymorpha HOM05D006809 ORTHO05D008609 4.8e-22 107.5 76 67.1
Pp3c18_4200 Physcomitrium patens HOM05D006809 ORTHO05D008609 5.3e-21 104.0 76 67.1
AagrBONN_evm.TU.Sc2ySwM_117.1929 Anthoceros agrestis HOM05D006809 ORTHO05D008609 2.0e-20 102.1 76 61.8
MSTRG.11330 Avicennia marina HOM05D006809 ORTHO05D008609 2.6e-20 101.7 76 64.5
TWI81G0697 Tripterygium wilfordii HOM05D006809 ORTHO05D008609 4.5e-20 100.9 77 62.3
TAR629G2676 Trochodendron aralioides HOM05D006809 ORTHO05D008609 4.5e-20 100.9 76 65.8
ATR0827G115 Amborella trichopoda HOM05D006809 ORTHO05D008609 5.9e-20 100.5 76 61.8
Lsat_1_v5_gn_5_23620 Lactuca sativa HOM05D006809 ORTHO05D008609 5.9e-20 100.5 77 64.9
RcHm_v2.0_Chr7g0183371 Rosa chinensis HOM05D006809 ORTHO05D008609 1.3e-19 99.4 77 62.3
Peaxi162Scf01223g00014 Petunia axillaris HOM05D006809 ORTHO05D008609 1.7e-19 99.0 77 62.3
PSO017G0895 Papaver somniferum HOM05D006809 ORTHO05D008609 2.2e-19 98.6 77 61.0
PSO478G2035 Papaver somniferum HOM05D006809 ORTHO05D008609 2.2e-19 98.6 77 61.0
Lj5A134T75 Lonicera japonica HOM05D006809 ORTHO05D008609 3.8e-19 97.8 77 62.3
Actinidia04809 Actinidia chinensis HOM05D006809 ORTHO05D008609 5.0e-19 97.4 80 61.2
Ah.11g047550 Amaranthus hybridus HOM05D006809 ORTHO05D008609 5.0e-19 97.4 76 63.2
Gohir.A07G067300 Gossypium hirsutum HOM05D006809 ORTHO05D008609 8.5e-19 96.7 76 61.8
Aqoxy3G03648 Aquilegia oxysepala HOM05D006809 ORTHO05D008609 1.1e-18 96.3 76 64.5
FvH4_5g13570 Fragaria vesca HOM05D006809 ORTHO05D008609 1.1e-18 96.3 77 61.0
FAN13G1268 Fragaria x ananassa HOM05D006809 ORTHO05D008609 1.1e-18 96.3 77 61.0
FAN18G0725 Fragaria x ananassa HOM05D006809 ORTHO05D008609 1.1e-18 96.3 77 61.0
Thecc.03G104800 Theobroma cacao HOM05D006809 ORTHO05D008609 1.1e-18 96.3 77 59.7
Thecc.K0005900 Theobroma cacao HOM05D006809 ORTHO05D008609 1.1e-18 96.3 77 59.7
Cfa019358 Carpinus fangiana HOM05D006809 ORTHO05D008609 1.4e-18 95.9 76 63.2
Haze_07749 Corylus avellana HOM05D006809 ORTHO05D008609 1.4e-18 95.9 76 63.2
HanXRQChr05g0154271 Helianthus annuus HOM05D006809 ORTHO05D008609 1.4e-18 95.9 77 61.0
Cpa.g.sc94.80 Carica papaya HOM05D006809 ORTHO05D008609 1.9e-18 95.5 76 60.5
Gohir.D07G071900 Gossypium hirsutum HOM05D006809 ORTHO05D008609 1.9e-18 95.5 76 60.5
Gorai.001G076000 Gossypium raimondii HOM05D006809 ORTHO05D008609 1.9e-18 95.5 76 60.5
Hma1.2p1_0060F.1_g032880 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 1.9e-18 95.5 77 61.0
QL10p020149 Quercus lobata HOM05D006809 ORTHO05D008609 1.9e-18 95.5 76 63.2
EL10Ac5g11165 Beta vulgaris HOM05D006809 ORTHO05D008609 2.5e-18 95.1 77 62.3
FAN08G0740 Fragaria x ananassa HOM05D006809 ORTHO05D008609 2.5e-18 95.1 77 59.7
Atru.chr9.503 Acer truncatum HOM05D006809 ORTHO05D008609 3.2e-18 94.7 77 58.4
Ciclev10023968m.g Citrus clementina HOM05D006809 ORTHO05D008609 3.2e-18 94.7 76 59.2
Dinv22761 Davidia involucrata HOM05D006809 ORTHO05D008609 3.2e-18 94.7 80 61.2
SMO358G0618 Selaginella moellendorffii HOM05D006809 ORTHO05D008609 3.2e-18 94.7 76 59.2
Glyma.06G205000 Glycine max HOM05D006809 ORTHO05D008609 4.2e-18 94.4 76 60.5
Manes.14G087700 Manihot esculenta HOM05D006809 ORTHO05D008609 4.2e-18 94.4 80 60.0
Nn4g23476 Nelumbo nucifera HOM05D006809 ORTHO05D008609 4.2e-18 94.4 76 60.5
Phvul.009G203000 Phaseolus vulgaris HOM05D006809 ORTHO05D008609 4.2e-18 94.4 76 60.5
Sc12g0007330 Simmondsia chinensis HOM05D006809 ORTHO05D008609 4.2e-18 94.4 76 64.5
VMungo1309G1606 Vigna mungo HOM05D006809 ORTHO05D008609 4.2e-18 94.4 76 60.5
GSVIVG01008127001 Vitis vinifera HOM05D006809 ORTHO05D008609 4.2e-18 94.4 75 60.0
arahy.Tifrunner.gnm1.ann1.23QZVI Arachis hypogaea HOM05D006809 ORTHO05D008609 5.5e-18 94.0 76 59.2
CSS0020904 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 5.5e-18 94.0 76 60.5
CSS0043969 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 5.5e-18 94.0 76 60.5
Duzib205G0618 Durio zibethinus HOM05D006809 ORTHO05D008609 5.5e-18 94.0 77 58.4
Lj1g0027663 Lotus japonicus HOM05D006809 ORTHO05D008609 5.5e-18 94.0 77 59.7
Lalb_Chr07g0189231 Lupinus albus HOM05D006809 ORTHO05D008609 7.2e-18 93.6 77 57.1
Hund09945 Selenicereus undatus HOM05D006809 ORTHO05D008609 9.3e-18 93.2 76 61.8
CiPaw.12G009200 Carya illinoinensis HOM05D006809 ORTHO05D008609 1.2e-17 92.8 75 62.7
ECA246G1387 Erigeron canadensis HOM05D006809 ORTHO05D008609 1.2e-17 92.8 76 60.5
Solyc12g038527.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 1.2e-17 92.8 76 60.5
Sopen12g018840 Solanum pennellii HOM05D006809 ORTHO05D008609 1.2e-17 92.8 76 60.5
vmacro17627 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 1.2e-17 92.8 76 59.2
COL.COLO4_24315 Corchorus olitorius HOM05D006809 ORTHO05D008609 2.1e-17 92.0 77 57.1
DCAR_010163 Daucus carota HOM05D006809 ORTHO05D008609 2.1e-17 92.0 76 59.2
Cc11_g04700 Coffea canephora HOM05D006809 ORTHO05D008609 3.6e-17 91.3 78 55.1
Prupe.5G207700 Prunus persica HOM05D006809 ORTHO05D008609 3.6e-17 91.3 76 59.2
ClCG04G011640 Citrullus lanatus HOM05D006809 ORTHO05D000432 4.6e-17 90.9 75 61.3
MD06G1203600 Malus domestica HOM05D006809 ORTHO05D008609 4.6e-17 90.9 77 57.1
MELO3C002045.2 Cucumis melo HOM05D006809 ORTHO05D008609 6.1e-17 90.5 75 60.0
CsaV3_1G006160 Cucumis sativus L. HOM05D006809 ORTHO05D008609 6.1e-17 90.5 75 60.0
CANSAT11G1370 Cannabis sativa HOM05D006809 ORTHO05D008609 7.9e-17 90.1 76 55.3
Oeu014424.1 Olea europaea HOM05D006809 ORTHO05D008609 7.9e-17 90.1 76 59.2
Ca_02916_v3 Cicer arietinum L. HOM05D006809 ORTHO05D008609 1.0e-16 89.7 76 55.3
Sed0027469 Sechium edule HOM05D006809 ORTHO05D008609 1.0e-16 89.7 79 59.5
Medtr2g060520 Medicago truncatula HOM05D006809 ORTHO05D008609 2.3e-16 88.6 76 55.3
Zm00001eb057630 Zea mays HOM05D006809 ORTHO05D008609 3.0e-16 88.2 77 58.4
Os03g0754900 Oryza sativa ssp. japonica HOM05D006809 ORTHO05D008609 3.9e-16 87.8 76 56.6
AL8G37560 Arabidopsis lyrata HOM05D006809 ORTHO05D008609 5.1e-16 87.4 76 53.9
AT5G60940 Arabidopsis thaliana HOM05D006809 ORTHO05D008609 5.1e-16 87.4 76 53.9
Carub.0008s2163 Capsella rubella HOM05D006809 ORTHO05D008609 8.7e-16 86.7 76 53.9
Thhalv10004278m.g Eutrema salsugineum HOM05D006809 ORTHO05D008609 2.5e-15 85.1 76 53.9
Psat6g135880 Pisum sativum HOM05D006809 ORTHO05D008609 3.3e-15 84.7 74 56.8
Aa31LG11G2360 Aethionema arabicum HOM05D006809 ORTHO05D008609 5.7e-15 84.0 77 53.2
CARHR274620 Cardamine hirsuta HOM05D006809 ORTHO05D008609 5.7e-15 84.0 76 52.6
PGR044G2265 Punica granatum HOM05D006809 ORTHO05D008609 5.7e-15 84.0 75 58.7
Eucgr.K02539 Eucalyptus grandis HOM05D006809 ORTHO05D008609 7.4e-15 83.6 75 54.7
A03p46650 Brassica napus HOM05D006809 ORTHO05D008609 9.7e-15 83.2 75 52.0
BraA03t13789Z Brassica rapa HOM05D006809 ORTHO05D008609 9.7e-15 83.2 75 52.0
Nitab4.5_0001723g0010 Nicotiana tabacum HOM05D006809 ORTHO05D008609 9.7e-15 83.2 101 47.5
vmacro16181 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 2.8e-14 81.6 94 47.9
Sp2g24250 Schrenkiella parvula HOM05D006809 ORTHO05D008609 4.8e-14 80.9 75 50.7
BolC7t44995H Brassica oleracea HOM05D006809 ORTHO05D008609 6.3e-14 80.5 75 50.7
BcaC06g33207 Brassica carinata HOM05D006809 ORTHO05D008609 8.2e-14 80.1 75 50.7
BcaNung06908 Brassica carinata HOM05D006809 ORTHO05D008609 8.2e-14 80.1 75 50.7
C07p44720 Brassica napus HOM05D006809 ORTHO05D008609 8.2e-14 80.1 75 50.7
SalBow5G3990 Salvia bowleyana HOM05D006809 ORTHO05D008609 4.5e-12 74.3 63 58.7
Rhsim08G0143500 Rhododendron simsii HOM05D006809 ORTHO05D008609 2.9e-11 71.6 120 37.5
Haze_26316 Corylus avellana HOM05D006809 ORTHO05D008609 8.5e-11 70.1 83 42.2
Hma1.2p1_0060F.1_g032870 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 3.2e-10 68.2 37 75.7
SGA_v2.0_scaffold313G48281 Striga asiatica HOM05D006809 ORTHO05D008609 3.3e-07 58.2 55 54.5
SEGI_17180 Sequoiadendron giganteum HOM05D006809 ORTHO05D008609 4.4e-07 57.8 52 55.8
AUR62032115 Chenopodium quinoa HOM05D006809 ORTHO05D008609 7.4e-07 57.0 53 56.6


User provided reference genes

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