Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g66690 Chara braunii HOM05D005480 ORTHO05D006735 4.8e-305 1050.8 741 100.0
AagrBONN_evm.TU.Sc2ySwM_117.4106 Anthoceros agrestis HOM05D005480 ORTHO05D006735 4.3e-59 233.8 384 41.1
Potri.007G036600 Populus trichocarpa HOM05D005480 ORTHO05D006735 2.1e-58 231.5 411 39.7
Dinv26753 Davidia involucrata HOM05D005480 ORTHO05D006735 1.4e-57 228.8 361 41.0
QL06p043724 Quercus lobata HOM05D005480 ORTHO05D006735 4.0e-57 227.3 463 40.4
VMungo1215G2543 Vigna mungo HOM05D005480 ORTHO05D006735 1.2e-56 225.7 363 40.5
Thecc.01G048100 Theobroma cacao HOM05D005480 ORTHO05D006735 7.5e-56 223.0 460 41.3
CiPaw.01G026500 Carya illinoinensis HOM05D005480 ORTHO05D006735 3.7e-55 220.7 480 36.7
Glyma.01G181500 Glycine max HOM05D005480 ORTHO05D006735 3.7e-55 220.7 376 39.9
Phvul.002G022500 Phaseolus vulgaris HOM05D005480 ORTHO05D006735 3.7e-55 220.7 350 40.3
PGR102G0042 Punica granatum HOM05D005480 ORTHO05D006735 3.7e-55 220.7 459 36.8
PSO170G5089 Papaver somniferum HOM05D005480 ORTHO05D006735 4.9e-55 220.3 356 41.3
PSO210G7251 Papaver somniferum HOM05D005480 ORTHO05D006735 8.3e-55 219.5 356 41.3
Aqoxy5G01417 Aquilegia oxysepala HOM05D005480 ORTHO05D006735 1.1e-54 219.2 349 41.0
Ciclev10025487m.g Citrus clementina HOM05D005480 ORTHO05D006735 4.1e-54 217.2 371 38.8
Hma1.2p1_0546F.1_g176180 Hydrangea macrophylla HOM05D005480 ORTHO05D006735 4.1e-54 217.2 431 39.4
Mapoly0027s0041 Marchantia polymorpha HOM05D005480 ORTHO05D006735 7.0e-54 216.5 493 44.2
CANSAT01G1679 Cannabis sativa HOM05D005480 ORTHO05D006735 1.2e-53 215.7 474 39.7
Glyma.11G059700 Glycine max HOM05D005480 ORTHO05D006735 1.6e-53 215.3 350 39.4
CsaV3_6G042900 Cucumis sativus L. HOM05D005480 ORTHO05D006735 2.7e-53 214.5 465 36.3
Psat2g164160 Pisum sativum HOM05D005480 ORTHO05D006735 3.5e-53 214.2 347 39.8
MELO3C007529.2 Cucumis melo HOM05D005480 ORTHO05D006735 4.6e-53 213.8 465 36.8
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 6.0e-53 213.4 366 39.1
Sed0026694 Sechium edule HOM05D005480 ORTHO05D006735 6.0e-53 213.4 466 38.4
Gohir.D12G090600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 7.8e-53 213.0 431 38.5
CDE02G2721 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 1.0e-52 212.6 284 44.4
CBR_g66696 Chara braunii HOM05D005480 ORTHO05D006735 1.3e-52 212.2 247 55.1
DCAR_021432 Daucus carota HOM05D005480 ORTHO05D006735 1.3e-52 212.2 351 40.7
Lj7A20T61 Lonicera japonica HOM05D005480 ORTHO05D006735 1.3e-52 212.2 457 38.3
SGA_v2.0_scaffold15G07231 Striga asiatica HOM05D005480 ORTHO05D006735 1.3e-52 212.2 377 38.5
TPR.G11349 Trifolium pratense HOM05D005480 ORTHO05D006735 1.3e-52 212.2 456 35.5
Actinidia12077 Actinidia chinensis HOM05D005480 ORTHO05D006735 2.3e-52 211.5 365 40.5
Lj7A18T44 Lonicera japonica HOM05D005480 ORTHO05D006735 2.3e-52 211.5 449 41.0
TAR381G0420 Trochodendron aralioides HOM05D005480 ORTHO05D006735 2.3e-52 211.5 388 39.2
Duzib147G0741 Durio zibethinus HOM05D005480 ORTHO05D006735 3.0e-52 211.1 426 40.8
Duzib187G0998 Durio zibethinus HOM05D005480 ORTHO05D006735 3.0e-52 211.1 428 40.4
Cc07_g05560 Coffea canephora HOM05D005480 ORTHO05D006735 6.6e-52 209.9 379 39.1
Gohir.A12G068600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 6.6e-52 209.9 426 38.0
Migut.H00485 Erythranthe guttata HOM05D005480 ORTHO05D006735 8.6e-52 209.5 350 39.1
Eucgr.H01972 Eucalyptus grandis HOM05D005480 ORTHO05D006735 8.6e-52 209.5 351 40.2
AL7G13910 Arabidopsis lyrata HOM05D005480 ORTHO05D006735 1.1e-51 209.1 301 41.9
Lj2g0021055 Lotus japonicus HOM05D005480 ORTHO05D006735 1.1e-51 209.1 381 38.3
MD15G1275400 Malus domestica HOM05D005480 ORTHO05D006735 1.1e-51 209.1 336 40.8
CSS0014684 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 2.5e-51 208.0 431 38.1
FAN23G2977 Fragaria x ananassa HOM05D005480 ORTHO05D006735 3.3e-51 207.6 319 40.4
FAN19G1500 Fragaria x ananassa HOM05D005480 ORTHO05D006735 4.3e-51 207.2 332 40.1
Rhsim02G0168000 Rhododendron simsii HOM05D005480 ORTHO05D006735 4.3e-51 207.2 350 40.0
MD02G1161300 Malus domestica HOM05D005480 ORTHO05D006735 5.6e-51 206.8 438 37.9
Sc03g0001260 Simmondsia chinensis HOM05D005480 ORTHO05D006735 5.6e-51 206.8 350 39.4
AT4G37130 Arabidopsis thaliana HOM05D005480 ORTHO05D006735 7.3e-51 206.5 325 40.0
FAN26G2127 Fragaria x ananassa HOM05D005480 ORTHO05D006735 7.3e-51 206.5 331 39.9
Dinv39906 Davidia involucrata HOM05D005480 ORTHO05D006735 9.5e-51 206.1 452 38.7
Manes.13G130100 Manihot esculenta HOM05D005480 ORTHO05D006735 9.5e-51 206.1 362 38.1
Medtr5g018390 Medicago truncatula HOM05D005480 ORTHO05D006735 9.5e-51 206.1 451 35.7
Hund13586 Selenicereus undatus HOM05D005480 ORTHO05D006735 9.5e-51 206.1 370 37.6
arahy.Tifrunner.gnm1.ann1.E9URZA Arachis hypogaea HOM05D005480 ORTHO05D006735 1.6e-50 205.3 348 40.2
MSTRG.23794 Avicennia marina HOM05D005480 ORTHO05D006735 2.1e-50 204.9 403 36.5
Thhalv10025060m.g Eutrema salsugineum HOM05D005480 ORTHO05D006735 2.1e-50 204.9 287 43.6
TAR625G1062 Trochodendron aralioides HOM05D005480 ORTHO05D006735 4.7e-50 203.8 453 38.9
Gorai.008G072400 Gossypium raimondii HOM05D005480 ORTHO05D006735 8.1e-50 203.0 426 38.3
Lalb_Chr09g0322931 Lupinus albus HOM05D005480 ORTHO05D006735 8.1e-50 203.0 353 39.7
Carub.0007s0332 Capsella rubella HOM05D005480 ORTHO05D006735 1.1e-49 202.6 386 37.3
FvH4_1g14810 Fragaria vesca HOM05D005480 ORTHO05D006735 1.1e-49 202.6 331 39.3
Nn6g32121 Nelumbo nucifera HOM05D005480 ORTHO05D006735 1.1e-49 202.6 348 40.2
RcHm_v2.0_Chr2g0103771 Rosa chinensis HOM05D005480 ORTHO05D006735 1.1e-49 202.6 351 39.0
CSS0005424 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 1.4e-49 202.2 431 37.4
FAN28G0426 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.4e-49 202.2 331 39.3
CARHR245380 Cardamine hirsuta HOM05D005480 ORTHO05D006735 3.1e-49 201.1 366 37.4
ATR0733G143 Amborella trichopoda HOM05D005480 ORTHO05D006735 4.0e-49 200.7 403 39.5
BraA01t00184Z Brassica rapa HOM05D005480 ORTHO05D006735 6.8e-49 199.9 380 40.3
Prupe.7G142300 Prunus persica HOM05D005480 ORTHO05D006735 6.8e-49 199.9 471 35.7
PGSC0003DMG400010074 Solanum tuberosum HOM05D005480 ORTHO05D006735 6.8e-49 199.9 473 38.9
A01p01950 Brassica napus HOM05D005480 ORTHO05D006735 8.9e-49 199.5 380 38.9
Lsat_1_v5_gn_4_179460 Lactuca sativa HOM05D005480 ORTHO05D006735 1.5e-48 198.7 332 39.5
Solyc02g090230.4 Solanum lycopersicum HOM05D005480 ORTHO05D006735 1.5e-48 198.7 483 38.3
Sopen02g034920 Solanum pennellii HOM05D005480 ORTHO05D006735 1.5e-48 198.7 457 39.6
CDE01G0732 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 4.4e-48 197.2 468 37.0
HanXRQChr04g0123741 Helianthus annuus HOM05D005480 ORTHO05D006735 4.4e-48 197.2 361 39.1
ECA232G3160 Erigeron canadensis HOM05D005480 ORTHO05D006735 1.7e-47 195.3 386 37.6
Sp7g34650 Schrenkiella parvula HOM05D005480 ORTHO05D006735 1.7e-47 195.3 373 37.5
THA.LOC104819823 Tarenaya hassleriana HOM05D005480 ORTHO05D006735 2.2e-47 194.9 368 39.4
BolC1t00204H Brassica oleracea HOM05D005480 ORTHO05D006735 1.1e-46 192.6 300 40.7
Aa31LG6G13860 Aethionema arabicum HOM05D005480 ORTHO05D006735 2.4e-46 191.4 352 38.1
C01p02120 Brassica napus HOM05D005480 ORTHO05D006735 2.4e-46 191.4 300 40.7
BcaNung03510 Brassica carinata HOM05D005480 ORTHO05D006735 4.6e-45 187.2 404 35.9
ClCG01G016580 Citrullus lanatus HOM05D005480 ORTHO05D006735 1.3e-44 185.7 517 32.7
Os09g0453500 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 2.3e-44 184.9 353 37.1
vmacro05295 Vaccinium macrocarpon HOM05D005480 ORTHO05D006735 3.0e-44 184.5 303 40.3
unitig_899.g14972 Utricularia gibba HOM05D005480 ORTHO05D006735 1.9e-43 181.8 405 32.3
Cfa004218 Carpinus fangiana HOM05D005480 ORTHO05D006735 2.5e-43 181.4 434 35.3
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 2.5e-43 181.4 284 40.8
COL.COLO4_11327 Corchorus olitorius HOM05D005480 ORTHO05D006735 2.1e-42 178.3 362 37.6
Pp3c24_6760 Physcomitrium patens HOM05D005480 ORTHO05D006735 8.1e-42 176.4 380 35.5
CAN.G836.34 Capsicum annuum HOM05D005480 ORTHO05D006735 4.0e-41 174.1 264 43.2
BolC3t20222H Brassica oleracea HOM05D005480 ORTHO05D006735 1.5e-40 172.2 408 36.5
Nitab4.5_0000108g0300 Nicotiana tabacum HOM05D005480 ORTHO05D006735 1.5e-40 172.2 309 41.1
GSVIVG01005079001 Vitis vinifera HOM05D005480 ORTHO05D006735 4.4e-40 170.6 244 43.4
MBI16_g19897_MAGBIO Magnolia biondii HOM05D005480 ORTHO05D006735 1.7e-39 168.7 346 38.2
BcaB03g12366 Brassica carinata HOM05D005480 ORTHO05D006735 3.8e-39 167.5 404 33.9
Nitab4.5_0001014g0070 Nicotiana tabacum HOM05D005480 ORTHO05D006735 3.8e-39 167.5 309 39.8
Sabra07G0032600 Salix brachista HOM05D005480 ORTHO05D006735 1.1e-38 166.0 342 36.5
Oeu003952.2 Olea europaea HOM05D005480 ORTHO05D006735 1.4e-38 165.6 259 38.6
BraA08t34205Z Brassica rapa HOM05D005480 ORTHO05D006735 4.1e-38 164.1 419 33.2
A08p22500 Brassica napus HOM05D005480 ORTHO05D006735 5.4e-38 163.7 424 33.3
AUR62003828 Chenopodium quinoa HOM05D005480 ORTHO05D006735 5.4e-38 163.7 426 33.3
BcaC01g00434 Brassica carinata HOM05D005480 ORTHO05D006735 9.2e-38 162.9 416 35.3
C03p79710 Brassica napus HOM05D005480 ORTHO05D006735 9.2e-38 162.9 416 35.3
BcaB03g12364 Brassica carinata HOM05D005480 ORTHO05D006735 3.5e-37 161.0 397 34.5
SHI08751 Sapria himalayana HOM05D005480 ORTHO05D006735 1.3e-36 159.1 407 35.1
Peaxi162Scf00993g00022 Petunia axillaris HOM05D005480 ORTHO05D006735 3.0e-36 157.9 438 38.4
Zm00001eb100530 Zea mays HOM05D005480 ORTHO05D006735 1.5e-35 155.6 319 34.8
Lalb_Chr05g0213141 Lupinus albus HOM05D005480 ORTHO05D006735 5.2e-33 147.1 265 37.7
Zm00001eb314700 Zea mays HOM05D005480 ORTHO05D006735 4.4e-32 144.1 412 32.0
Haze_15193 Corylus avellana HOM05D005480 ORTHO05D006735 1.1e-30 139.4 368 34.5
AUR62001975 Chenopodium quinoa HOM05D005480 ORTHO05D006735 3.0e-28 131.3 387 31.5
SEGI_40098 Sequoiadendron giganteum HOM05D005480 ORTHO05D006735 8.7e-28 129.8 223 38.6
SGA_v2.0_scaffold135G34951 Striga asiatica HOM05D005480 ORTHO05D006735 1.3e-26 125.9 356 32.9
Ca_24802_v3 Cicer arietinum L. HOM05D005480 ORTHO05D006735 4.8e-26 124.0 388 33.0
HPP92_016040 Vanilla planifolia HOM05D005480 ORTHO05D006735 6.2e-26 123.6 203 38.4
Mapoly0016s0112 Marchantia polymorpha HOM05D005480 ORTHO05D006735 1.4e-25 122.5 373 30.0
arahy.Tifrunner.gnm1.ann1.HXIH5S Arachis hypogaea HOM05D005480 ORTHO05D006735 1.3e-23 115.9 330 32.1
Ah.03g144040 Amaranthus hybridus HOM05D005480 ORTHO05D006735 3.5e-21 107.8 208 34.6
Os03g0765400 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 2.3e-20 105.1 364 29.9
Cre16.g685217 Chlamydomonas reinhardtii HOM05D005480 ORTHO05D006735 5.3e-17 94.0 478 27.0
Psat5g148720 Pisum sativum HOM05D005480 ORTHO05D006735 7.9e-13 80.1 151 37.7
HPP92_016039 Vanilla planifolia HOM05D005480 ORTHO05D006735 2.4e-09 68.6 54 57.4
MCO13G109 Micromonas commoda HOM05D005480 ORTHO05D270213 1.0e-07 63.2 399 25.3


User provided reference genes

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