Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g61457 Chara braunii HOM05D005579 ORTHO05D006775 0.0e+00 2572.7 1258 100.0
HanXRQChr15g0495541 Helianthus annuus HOM05D005579 ORTHO05D006775 4.3e-11 75.1 145 33.8
Actinidia32860 Actinidia chinensis HOM05D005579 ORTHO05D006775 9.6e-11 73.9 145 31.0
CSS0017636 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 9.6e-11 73.9 145 31.7
CSS0047196 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 9.6e-11 73.9 145 31.7
Dinv28443 Davidia involucrata HOM05D005579 ORTHO05D006775 9.6e-11 73.9 145 31.0
Actinidia34112 Actinidia chinensis HOM05D005579 ORTHO05D006775 2.1e-10 72.8 145 31.0
Rhsim03G0180800 Rhododendron simsii HOM05D005579 ORTHO05D006775 6.2e-10 71.2 145 31.7
Lj2g0003134 Lotus japonicus HOM05D005579 ORTHO05D006775 1.1e-09 70.5 144 30.6
COL.COLO4_14309 Corchorus olitorius HOM05D005579 ORTHO05D006775 1.8e-09 69.7 144 31.2
DCAR_018198 Daucus carota HOM05D005579 ORTHO05D006775 1.8e-09 69.7 143 32.9
Hma1.2p1_0270F.1_g108020 Hydrangea macrophylla HOM05D005579 ORTHO05D006775 2.4e-09 69.3 225 27.1
ECA232G1470 Erigeron canadensis HOM05D005579 ORTHO05D006775 3.1e-09 68.9 144 31.2
Atru.chr1.458 Acer truncatum HOM05D005579 ORTHO05D006775 4.0e-09 68.6 144 29.9
FAN03G0333 Fragaria x ananassa HOM05D005579 ORTHO05D006775 4.0e-09 68.6 145 31.7
FAN03G0790 Fragaria x ananassa HOM05D005579 ORTHO05D006775 4.0e-09 68.6 145 31.7
FAN10G2011 Fragaria x ananassa HOM05D005579 ORTHO05D006775 4.0e-09 68.6 145 31.7
Thhalv10015364m.g Eutrema salsugineum HOM05D005579 ORTHO05D006775 5.3e-09 68.2 192 27.6
Lsat_1_v5_gn_9_55980 Lactuca sativa HOM05D005579 ORTHO05D006775 5.3e-09 68.2 145 32.4
Sabra12G0106200 Salix brachista HOM05D005579 ORTHO05D006775 5.3e-09 68.2 145 32.4
Thecc.03G176600 Theobroma cacao HOM05D005579 ORTHO05D006775 5.3e-09 68.2 144 30.6
Manes.06G147100 Manihot esculenta HOM05D005579 ORTHO05D006775 6.9e-09 67.8 146 31.5
FvH4_7g29470 Fragaria vesca HOM05D005579 ORTHO05D006775 9.0e-09 67.4 145 31.7
FAN01G1040 Fragaria x ananassa HOM05D005579 ORTHO05D006775 9.0e-09 67.4 145 31.0
FAN06G0670 Fragaria x ananassa HOM05D005579 ORTHO05D006775 9.0e-09 67.4 145 31.7
MBI17_g39341_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 9.0e-09 67.4 145 30.3
Potri.012G141100 Populus trichocarpa HOM05D005579 ORTHO05D006775 9.0e-09 67.4 145 31.7
VMungo0464G1636 Vigna mungo HOM05D005579 ORTHO05D006775 9.0e-09 67.4 145 29.7
Cfa008319 Carpinus fangiana HOM05D005579 ORTHO05D006775 1.2e-08 67.0 145 29.7
CiPaw.04G071000 Carya illinoinensis HOM05D005579 ORTHO05D006775 1.2e-08 67.0 144 31.2
Gohir.D12G259200 Gossypium hirsutum HOM05D005579 ORTHO05D006775 1.2e-08 67.0 144 30.6
Nitab4.5_0009681g0030 Nicotiana tabacum HOM05D005579 ORTHO05D006775 1.2e-08 67.0 145 31.0
Peaxi162Scf00444g00841 Petunia axillaris HOM05D005579 ORTHO05D006775 1.2e-08 67.0 144 32.6
FAN06G0715 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.5e-08 66.6 145 31.7
GSVIVG01028977001 Vitis vinifera HOM05D005579 ORTHO05D006775 1.5e-08 66.6 144 29.2
Haze_13712 Corylus avellana HOM05D005579 ORTHO05D006775 2.0e-08 66.2 145 29.7
Solyc03g025820.3 Solanum lycopersicum HOM05D005579 ORTHO05D006775 2.6e-08 65.9 233 27.5
unitig_37.g12526 Utricularia gibba HOM05D005579 ORTHO05D006775 2.6e-08 65.9 271 23.2
Gohir.A12G257850 Gossypium hirsutum HOM05D005579 ORTHO05D006775 3.4e-08 65.5 144 29.9
BcaC01g06176 Brassica carinata HOM05D005579 ORTHO05D006775 4.5e-08 65.1 154 28.6
A03p15740 Brassica napus HOM05D005579 ORTHO05D006775 4.5e-08 65.1 154 28.6
BraA03t10864Z Brassica rapa HOM05D005579 ORTHO05D006775 4.5e-08 65.1 154 28.6
MELO3C003322.2 Cucumis melo HOM05D005579 ORTHO05D006775 4.5e-08 65.1 144 27.1
Gorai.008G277600 Gossypium raimondii HOM05D005579 ORTHO05D006775 4.5e-08 65.1 144 30.6
Phvul.004G117000 Phaseolus vulgaris HOM05D005579 ORTHO05D006775 4.5e-08 65.1 145 29.7
RcHm_v2.0_Chr1g0377251 Rosa chinensis HOM05D005579 ORTHO05D006775 4.5e-08 65.1 145 30.3
ATR0680G156 Amborella trichopoda HOM05D005579 ORTHO05D006775 5.8e-08 64.7 144 30.6
arahy.Tifrunner.gnm1.ann1.Q0IWYL Arachis hypogaea HOM05D005579 ORTHO05D006775 5.8e-08 64.7 145 28.3
arahy.Tifrunner.gnm1.ann1.TEHT7Q Arachis hypogaea HOM05D005579 ORTHO05D006775 5.8e-08 64.7 145 28.3
BcaB01g04199 Brassica carinata HOM05D005579 ORTHO05D006775 5.8e-08 64.7 154 29.9
C03p18410 Brassica napus HOM05D005579 ORTHO05D006775 5.8e-08 64.7 154 29.2
BolC3t14238H Brassica oleracea HOM05D005579 ORTHO05D006775 5.8e-08 64.7 154 29.2
PSO063G6446 Papaver somniferum HOM05D005579 ORTHO05D006775 5.8e-08 64.7 145 27.6
Nitab4.5_0000716g0010 Nicotiana tabacum HOM05D005579 ORTHO05D006775 7.6e-08 64.3 144 27.8
TPR.G10740 Trifolium pratense HOM05D005579 ORTHO05D006775 7.6e-08 64.3 144 29.2
PGSC0003DMG400014341 Solanum tuberosum HOM05D005579 ORTHO05D006775 9.9e-08 63.9 145 30.3
Glyma.09G139400 Glycine max HOM05D005579 ORTHO05D006775 1.3e-07 63.5 145 28.3
Medtr6g045357 Medicago truncatula HOM05D005579 ORTHO05D006775 1.3e-07 63.5 143 28.0
CAN.G490.30 Capsicum annuum HOM05D005579 ORTHO05D006775 1.7e-07 63.2 241 24.9
CsaV3_3G049940 Cucumis sativus L. HOM05D005579 ORTHO05D006775 1.7e-07 63.2 173 24.9
Duzib068G1336 Durio zibethinus HOM05D005579 ORTHO05D006775 1.7e-07 63.2 144 29.2
QL09p014220 Quercus lobata HOM05D005579 ORTHO05D006775 1.7e-07 63.2 143 30.1
Ciclev10006492m.g Citrus clementina HOM05D005579 ORTHO05D006775 2.2e-07 62.8 144 31.9
PSO782G1268 Papaver somniferum HOM05D005579 ORTHO05D006775 2.2e-07 62.8 145 27.6
Sopen03g004630 Solanum pennellii HOM05D005579 ORTHO05D006775 2.2e-07 62.8 145 30.3
ClCG09G012930 Citrullus lanatus HOM05D005579 ORTHO05D006775 2.9e-07 62.4 173 24.9
Nn6g33500 Nelumbo nucifera HOM05D005579 ORTHO05D006775 2.9e-07 62.4 144 29.2
Sp6g14550 Schrenkiella parvula HOM05D005579 ORTHO05D006775 2.9e-07 62.4 174 28.2
Cc02_g02990 Coffea canephora HOM05D005579 ORTHO05D006775 3.8e-07 62.0 144 29.9
Eucgr.L01677 Eucalyptus grandis HOM05D005579 ORTHO05D006775 3.8e-07 62.0 145 30.3
Psat0s2227g0080 Pisum sativum HOM05D005579 ORTHO05D006775 3.8e-07 62.0 144 27.8
Sed0022815 Sechium edule HOM05D005579 ORTHO05D006775 6.4e-07 61.2 173 24.9
Sc13g0008650 Simmondsia chinensis HOM05D005579 ORTHO05D006775 6.4e-07 61.2 146 29.5
Mapoly0013s0198 Marchantia polymorpha HOM05D005579 ORTHO05D006775 1.1e-06 60.5 68 45.6
Prupe.2G294300 Prunus persica HOM05D005579 ORTHO05D006775 1.1e-06 60.5 144 27.8
SHI39775 Sapria himalayana HOM05D005579 ORTHO05D006775 1.1e-06 60.5 145 28.3
Ah.07g207210 Amaranthus hybridus HOM05D005579 ORTHO05D006775 1.4e-06 60.1 146 28.8
SalBow4G1821 Salvia bowleyana HOM05D005579 ORTHO05D006775 1.4e-06 60.1 229 24.9
SalBow4G2278 Salvia bowleyana HOM05D005579 ORTHO05D006775 1.4e-06 60.1 229 24.9
TAR367G0001 Trochodendron aralioides HOM05D005579 ORTHO05D006775 1.4e-06 60.1 144 28.5
Zm00001eb248620 Zea mays HOM05D005579 ORTHO05D006775 1.4e-06 60.1 144 28.5
CARHR265270 Cardamine hirsuta HOM05D005579 ORTHO05D006775 1.9e-06 59.7 197 23.9
AL8G26680 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 3.2e-06 58.9 145 28.3
MD07G1268700 Malus domestica HOM05D005579 ORTHO05D006775 4.2e-06 58.5 144 28.5
Aa31LG3G8710 Aethionema arabicum HOM05D005579 ORTHO05D006775 5.4e-06 58.2 154 29.2
Lalb_Chr19g0130861 Lupinus albus HOM05D005579 ORTHO05D006775 5.4e-06 58.2 144 27.8
Cpa.g.sc107.52 Carica papaya HOM05D005579 ORTHO05D006775 7.1e-06 57.8 145 26.9
FAN10G0535 Fragaria x ananassa HOM05D005579 ORTHO05D006775 7.1e-06 57.8 65 41.5
PGR142G3926 Punica granatum HOM05D005579 ORTHO05D006775 7.1e-06 57.8 144 27.1
SMO364G0179 Selaginella moellendorffii HOM05D005579 ORTHO05D006775 7.1e-06 57.8 145 27.6
AT5G52290 Arabidopsis thaliana HOM05D005579 ORTHO05D006775 9.3e-06 57.4 145 26.9
Carub.0008s1239 Capsella rubella HOM05D005579 ORTHO05D006775 9.3e-06 57.4 192 25.5


User provided reference genes

Program Settings