Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g52462 Chara braunii HOM05D005383 ORTHO05D006722 7.4e-195 684.1 460 100.0
DCAR_025351 Daucus carota HOM05D005383 ORTHO05D006722 9.8e-30 135.6 249 61.8
Mapoly0095s0037 Marchantia polymorpha HOM05D005383 ORTHO05D006722 2.2e-29 134.4 276 62.3
PSO063G2254 Papaver somniferum HOM05D005383 ORTHO05D006722 2.9e-29 134.0 256 60.9
HanXRQChr08g0209021 Helianthus annuus HOM05D005383 ORTHO05D006722 6.4e-29 132.9 252 61.5
PGR042G1418 Punica granatum HOM05D005383 ORTHO05D006722 6.4e-29 132.9 276 58.3
PSO017G2626 Papaver somniferum HOM05D005383 ORTHO05D006722 4.1e-28 130.2 245 64.5
Sopen03g023060 Solanum pennellii HOM05D005383 ORTHO05D006722 4.1e-28 130.2 274 62.0
GSVIVG01023286001 Vitis vinifera HOM05D005383 ORTHO05D006722 4.1e-28 130.2 277 58.5
Lalb_Chr07g0185851 Lupinus albus HOM05D005383 ORTHO05D006722 5.4e-28 129.8 295 55.9
Rhsim11G0125900 Rhododendron simsii HOM05D005383 ORTHO05D006722 5.4e-28 129.8 257 60.7
Ca_00052_v3 Cicer arietinum L. HOM05D005383 ORTHO05D006722 7.0e-28 129.4 272 58.1
MSTRG.5117 Avicennia marina HOM05D005383 ORTHO05D006722 1.6e-27 128.3 265 59.6
CDE08G1140 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 1.6e-27 128.3 257 61.5
Lsat_1_v5_gn_4_6600 Lactuca sativa HOM05D005383 ORTHO05D006722 1.6e-27 128.3 251 61.0
Peaxi162Scf00003g04037 Petunia axillaris HOM05D005383 ORTHO05D006722 1.6e-27 128.3 296 55.1
MELO3C011837.2 Cucumis melo HOM05D005383 ORTHO05D006722 2.0e-27 127.9 281 56.9
Migut.B00804 Erythranthe guttata HOM05D005383 ORTHO05D006722 2.0e-27 127.9 249 61.4
CsaV3_5G029920 Cucumis sativus L. HOM05D005383 ORTHO05D006722 2.7e-27 127.5 281 56.6
Glyma.08G126300 Glycine max HOM05D005383 ORTHO05D006722 2.7e-27 127.5 249 61.0
PGSC0003DMG400009082 Solanum tuberosum HOM05D005383 ORTHO05D006722 4.6e-27 126.7 252 63.9
Solyc03g083310.4 Solanum lycopersicum HOM05D005383 ORTHO05D006722 6.0e-27 126.3 250 60.8
Sed0026787 Sechium edule HOM05D005383 ORTHO05D006722 1.0e-26 125.6 292 55.5
Zm00001eb181970 Zea mays HOM05D005383 ORTHO05D006722 1.3e-26 125.2 246 60.6
CDE02G2650 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 1.7e-26 124.8 249 62.2
ECA233G1887 Erigeron canadensis HOM05D005383 ORTHO05D006722 3.0e-26 124.0 278 57.2
Zm00001eb243510 Zea mays HOM05D005383 ORTHO05D006722 3.0e-26 124.0 268 57.8
CANSAT54G1323 Cannabis sativa HOM05D005383 ORTHO05D006722 3.9e-26 123.6 286 55.2
Duzib248G0552 Durio zibethinus HOM05D005383 ORTHO05D006722 5.0e-26 123.2 258 37.2
TAR628G0519 Trochodendron aralioides HOM05D005383 ORTHO05D006722 5.0e-26 123.2 255 60.8
Aqoxy6G00141 Aquilegia oxysepala HOM05D005383 ORTHO05D006722 6.6e-26 122.9 259 59.8
Os02g0551900 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 6.6e-26 122.9 263 57.8
QL02p099934 Quercus lobata HOM05D005383 ORTHO05D006722 6.6e-26 122.9 260 59.6
SGA_v2.0_scaffold42G15921 Striga asiatica HOM05D005383 ORTHO05D006722 6.6e-26 122.9 243 62.6
CiPaw.05G051100 Carya illinoinensis HOM05D005383 ORTHO05D006722 8.6e-26 122.5 292 55.5
VMungo0251G3735 Vigna mungo HOM05D005383 ORTHO05D006722 8.6e-26 122.5 276 55.8
Lsat_1_v5_gn_8_160061 Lactuca sativa HOM05D005383 ORTHO05D006722 1.5e-25 121.7 252 59.1
HPP92_009272 Vanilla planifolia HOM05D005383 ORTHO05D006722 1.5e-25 121.7 243 62.1
CSS0013900 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 1.9e-25 121.3 255 59.6
CSS0016011 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 1.9e-25 121.3 255 59.6
Ciclev10001534m.g Citrus clementina HOM05D005383 ORTHO05D006722 1.9e-25 121.3 255 59.6
TPR.G2110 Trifolium pratense HOM05D005383 ORTHO05D006722 1.9e-25 121.3 251 59.8
vmacro01730 Vaccinium macrocarpon HOM05D005383 ORTHO05D006722 2.5e-25 120.9 255 59.6
BcaB08g35467 Brassica carinata HOM05D005383 ORTHO05D006722 3.3e-25 120.6 256 58.6
BcaC04g20728 Brassica carinata HOM05D005383 ORTHO05D006722 3.3e-25 120.6 256 59.4
BolC9t56882H Brassica oleracea HOM05D005383 ORTHO05D006722 3.3e-25 120.6 256 59.4
CAN.G968.1 Capsicum annuum HOM05D005383 ORTHO05D006722 3.3e-25 120.6 299 55.2
Hma1.2p1_1108F.1_g257860 Hydrangea macrophylla HOM05D005383 ORTHO05D006722 3.3e-25 120.6 277 57.4
MD08G1239600 Malus domestica HOM05D005383 ORTHO05D006722 3.3e-25 120.6 256 60.9
Phvul.002G248200 Phaseolus vulgaris HOM05D005383 ORTHO05D006722 3.3e-25 120.6 276 55.4
A10p07980 Brassica napus HOM05D005383 ORTHO05D006722 5.6e-25 119.8 256 59.4
Eucgr.G00356 Eucalyptus grandis HOM05D005383 ORTHO05D006722 5.6e-25 119.8 276 56.2
Nn5g27588 Nelumbo nucifera HOM05D005383 ORTHO05D006722 5.6e-25 119.8 254 60.2
EL10Ac2g02705 Beta vulgaris HOM05D005383 ORTHO05D006722 7.3e-25 119.4 253 59.7
Cpa.g.sc161.1 Carica papaya HOM05D005383 ORTHO05D006722 7.3e-25 119.4 254 59.4
Gohir.A01G182000 Gossypium hirsutum HOM05D005383 ORTHO05D006722 7.3e-25 119.4 260 58.1
TAR381G0956 Trochodendron aralioides HOM05D005383 ORTHO05D006722 7.3e-25 119.4 260 60.0
Glyma.05G167900 Glycine max HOM05D005383 ORTHO05D006722 9.5e-25 119.0 249 59.4
Manes.10G120600 Manihot esculenta HOM05D005383 ORTHO05D006722 9.5e-25 119.0 256 59.4
COL.COLO4_17761 Corchorus olitorius HOM05D005383 ORTHO05D006722 1.2e-24 118.6 265 35.8
Thecc.02G025800 Theobroma cacao HOM05D005383 ORTHO05D006722 1.2e-24 118.6 259 58.3
arahy.Tifrunner.gnm1.ann1.UJ0XJV Arachis hypogaea HOM05D005383 ORTHO05D006722 1.6e-24 118.2 278 55.8
BraSC35t46002Z Brassica rapa HOM05D005383 ORTHO05D006722 1.6e-24 118.2 256 59.0
Gohir.D01G173100 Gossypium hirsutum HOM05D005383 ORTHO05D006722 1.6e-24 118.2 260 58.1
RcHm_v2.0_Chr7g0220861 Rosa chinensis HOM05D005383 ORTHO05D006722 1.6e-24 118.2 256 60.2
THA.LOC104801420 Tarenaya hassleriana HOM05D005383 ORTHO05D006722 1.6e-24 118.2 292 52.7
Potri.004G221700 Populus trichocarpa HOM05D005383 ORTHO05D006722 2.1e-24 117.9 264 58.3
AagrBONN_evm.TU.Sc2ySwM_228.1706 Anthoceros agrestis HOM05D005383 ORTHO05D006722 2.8e-24 117.5 260 59.6
Aa31LG3G14030 Aethionema arabicum HOM05D005383 ORTHO05D006722 3.6e-24 117.1 254 58.3
Nitab4.5_0009812g0010 Nicotiana tabacum HOM05D005383 ORTHO05D006722 3.6e-24 117.1 300 53.3
Psat1g221920 Pisum sativum HOM05D005383 ORTHO05D006722 3.6e-24 117.1 245 60.8
Potri.003G010400 Populus trichocarpa HOM05D005383 ORTHO05D006722 3.6e-24 117.1 281 55.9
Lalb_Chr13g0295611 Lupinus albus HOM05D005383 ORTHO05D006722 4.7e-24 116.7 281 54.4
Gorai.002G214700 Gossypium raimondii HOM05D005383 ORTHO05D006722 6.2e-24 116.3 251 59.4
Nitab4.5_0000548g0200 Nicotiana tabacum HOM05D005383 ORTHO05D006722 6.2e-24 116.3 293 53.2
FAN13G0305 Fragaria x ananassa HOM05D005383 ORTHO05D006722 1.1e-23 115.5 263 58.2
HanXRQChr04g0103661 Helianthus annuus HOM05D005383 ORTHO05D006722 1.1e-23 115.5 247 60.3
TWI59G0781 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 1.8e-23 114.8 256 59.0
CiPaw.06G143700 Carya illinoinensis HOM05D005383 ORTHO05D006722 2.3e-23 114.4 280 43.2
TWI23G0375 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 2.3e-23 114.4 260 57.7
Pp3c7_7980 Physcomitrium patens HOM05D005383 ORTHO05D006722 3.1e-23 114.0 267 63.3
Lj4g0022432 Lotus japonicus HOM05D005383 ORTHO05D006722 4.0e-23 113.6 245 60.0
Actinidia00189 Actinidia chinensis HOM05D005383 ORTHO05D006722 6.8e-23 112.8 260 57.7
Cc02_g22940 Coffea canephora HOM05D005383 ORTHO05D006722 6.8e-23 112.8 284 54.6
Atru.chr6.733 Acer truncatum HOM05D005383 ORTHO05D006722 1.2e-22 112.1 267 56.9
Dinv01847 Davidia involucrata HOM05D005383 ORTHO05D006722 1.2e-22 112.1 267 57.7
Thhalv10028723m.g Eutrema salsugineum HOM05D005383 ORTHO05D006722 1.5e-22 111.7 254 57.1
Lj9A301T38 Lonicera japonica HOM05D005383 ORTHO05D006722 1.5e-22 111.7 285 54.7
BcaC01g06099 Brassica carinata HOM05D005383 ORTHO05D006722 2.0e-22 111.3 245 57.6
Sp6g13330 Schrenkiella parvula HOM05D005383 ORTHO05D006722 2.6e-22 110.9 254 56.7
Sed0022153 Sechium edule HOM05D005383 ORTHO05D006722 2.6e-22 110.9 282 55.0
Ciclev10003783m.g Citrus clementina HOM05D005383 ORTHO05D006722 5.8e-22 109.8 265 57.7
HPP92_013744 Vanilla planifolia HOM05D006763 ORTHO05D008659 5.8e-22 109.8 271 56.1
AT4G06634 Arabidopsis thaliana HOM05D005383 ORTHO05D006722 9.8e-22 109.0 254 57.9
Carub.0006s2631 Capsella rubella HOM05D005383 ORTHO05D006722 1.3e-21 108.6 254 57.1
FvH4_5g28700 Fragaria vesca HOM05D005383 ORTHO05D006722 1.3e-21 108.6 248 58.9
FAN08G2879 Fragaria x ananassa HOM05D005383 ORTHO05D006722 1.3e-21 108.6 248 58.9
Hund12945 Selenicereus undatus HOM05D005383 ORTHO05D006722 1.7e-21 108.2 249 46.2
BolC3t14307H Brassica oleracea HOM05D005383 ORTHO05D006722 2.2e-21 107.8 251 47.4
unitig_699.g19853 Utricularia gibba HOM05D005383 ORTHO05D006722 2.2e-21 107.8 273 27.1
C03p19190 Brassica napus HOM05D005383 ORTHO05D006722 2.9e-21 107.5 245 57.1
CARHR260070 Cardamine hirsuta HOM05D005383 ORTHO05D006722 3.7e-21 107.1 256 57.4
C09p39820 Brassica napus HOM05D005383 ORTHO05D006722 4.9e-21 106.7 241 60.6
A03p16300 Brassica napus HOM05D005383 ORTHO05D006722 6.4e-21 106.3 245 57.1
Haze_01820 Corylus avellana HOM05D005383 ORTHO05D006722 1.1e-20 105.5 288 39.2
Os05g0106000 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 1.4e-20 105.1 258 60.1
Prupe.1G576100 Prunus persica HOM05D005383 ORTHO05D006722 1.4e-20 105.1 253 44.3
AL6G41240 Arabidopsis lyrata HOM05D005383 ORTHO05D006722 2.4e-20 104.4 286 51.0
arahy.Tifrunner.gnm1.ann1.E4SRBI Arachis hypogaea HOM05D005383 ORTHO05D006722 9.2e-20 102.4 240 60.4
SMO347G0081 Selaginella moellendorffii HOM05D005383 ORTHO05D006722 1.2e-19 102.1 234 58.5
SEGI_13518 Sequoiadendron giganteum HOM05D005383 ORTHO05D006722 2.0e-19 101.3 109 60.6
BraA03t10921Z Brassica rapa HOM05D005383 ORTHO05D006722 2.7e-19 100.9 249 46.2
arahy.Tifrunner.gnm1.ann1.I6AGPX Arachis hypogaea HOM05D005383 ORTHO05D006722 3.5e-19 100.5 245 59.6
BcaC01g06075 Brassica carinata HOM05D005383 ORTHO05D006722 3.5e-19 100.5 247 55.5
ClCG11G013400 Citrullus lanatus HOM05D005383 ORTHO05D006722 1.3e-18 98.6 118 56.8
Actinidia39015 Actinidia chinensis HOM05D005383 ORTHO05D006722 1.5e-17 95.1 118 53.4
Sabra03G0005300 Salix brachista HOM05D005383 ORTHO05D006722 1.5e-17 95.1 91 44.0
unitig_747.g21262 Utricularia gibba HOM05D005383 ORTHO05D006722 4.3e-17 93.6 277 55.6
FAN04G2588 Fragaria x ananassa HOM05D005383 ORTHO05D006722 9.5e-17 92.4 111 56.8
Sc07g0004970 Simmondsia chinensis HOM05D005383 ORTHO05D006722 4.7e-16 90.1 222 62.6
MSTRG.16504 Avicennia marina HOM05D005383 ORTHO05D006722 1.1e-15 89.0 227 61.2
Zm00001eb267130 Zea mays HOM05D005383 ORTHO05D006722 6.8e-15 86.3 293 49.5
Oeu036675.1 Olea europaea HOM05D005383 ORTHO05D006722 8.9e-15 85.9 236 56.8
ATR0071G030 Amborella trichopoda HOM05D005383 ORTHO05D006722 2.0e-14 84.7 246 58.5
MD15G1431100 Malus domestica HOM05D005383 ORTHO05D006722 9.9e-14 82.4 257 49.8
FAN18G2475 Fragaria x ananassa HOM05D005383 ORTHO05D006722 2.1e-11 74.7 111 49.5
Ciclev10003892m.g Citrus clementina HOM05D005383 ORTHO05D006722 1.3e-10 72.0 231 42.9
AUR62041111 Chenopodium quinoa HOM05D005383 ORTHO05D006722 8.1e-08 62.8 33 75.8
Sabra01G0167800 Salix brachista HOM05D005383 ORTHO05D006722 1.1e-07 62.4 39 64.1
Peaxi162Scf00003g03953 Petunia axillaris HOM05D000011 ORTHO05D011267 1.8e-07 61.6 63 47.6
Peaxi162Scf03254g00012 Petunia axillaris HOM05D005383 ORTHO05D006722 8.9e-07 59.3 78 42.3


User provided reference genes

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