Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g49763 Chara braunii HOM05D015517 ORTHO05D017295 0.0e+00 1390.2 705 100.0
AagrBONN_evm.TU.Sc2ySwM_344.3546 Anthoceros agrestis HOM05D015517 ORTHO05D017295 1.1e-104 385.2 388 51.8
Pp3c20_17110 Physcomitrium patens HOM05D015517 ORTHO05D017295 4.0e-99 366.7 393 48.1
CBR_g20049 Chara braunii HOM05D015517 ORTHO05D017295 1.4e-96 358.2 346 51.7
Mapoly0102s0003 Marchantia polymorpha HOM05D015517 ORTHO05D017295 2.7e-95 354.0 394 47.5
MCO05G533 Micromonas commoda HOM05D015517 ORTHO05D017295 2.8e-68 264.2 360 41.1
PRCOL_00006244 Prasinoderma coloniale HOM05D015517 ORTHO05D017295 3.6e-55 220.7 227 49.8
Cfa026510 Carpinus fangiana HOM05D015517 ORTHO05D017295 6.7e-30 136.7 328 29.3
Cfa023983 Carpinus fangiana HOM05D015517 ORTHO05D017295 5.2e-22 110.5 372 29.3
Sp5g00810 Schrenkiella parvula HOM05D000495 ORTHO05D000357 7.5e-13 80.1 253 27.3
BcaC02g10307 Brassica carinata HOM05D000495 ORTHO05D000357 1.7e-12 79.0 301 25.6
BolC4t24583H Brassica oleracea HOM05D000495 ORTHO05D000357 1.7e-12 79.0 301 25.6
CARHR172980 Cardamine hirsuta HOM05D000495 ORTHO05D000357 1.7e-12 79.0 253 26.5
COL.COLO4_16464 Corchorus olitorius HOM05D000495 ORTHO05D000357 1.7e-12 79.0 322 25.5
Aa31LG4G15970 Aethionema arabicum HOM05D000495 ORTHO05D000357 2.2e-12 78.6 308 25.3
BcaB02g07321 Brassica carinata HOM05D000495 ORTHO05D000357 2.2e-12 78.6 304 25.7
BcaB02g07323 Brassica carinata HOM05D000495 ORTHO05D000357 2.2e-12 78.6 304 25.7
BcaB02g07325 Brassica carinata HOM05D000495 ORTHO05D000357 2.2e-12 78.6 304 25.7
BolC6t38008H Brassica oleracea HOM05D000495 ORTHO05D000357 2.2e-12 78.6 316 25.9
C04p30480 Brassica napus HOM05D000495 ORTHO05D000357 2.8e-12 78.2 301 25.2
Thhalv10005832m.g Eutrema salsugineum HOM05D000495 ORTHO05D000357 2.8e-12 78.2 253 26.9
A04p00570 Brassica napus HOM05D000495 ORTHO05D000357 4.9e-12 77.4 301 25.2
BraA04t15777Z Brassica rapa HOM05D000495 ORTHO05D000357 4.9e-12 77.4 301 25.2
BcaC08g45236 Brassica carinata HOM05D000495 ORTHO05D000357 8.3e-12 76.6 253 27.3
A07p26070 Brassica napus HOM05D000495 ORTHO05D000357 8.3e-12 76.6 253 27.3
C06p28380 Brassica napus HOM05D000495 ORTHO05D000357 8.3e-12 76.6 253 27.3
BraA07t30255Z Brassica rapa HOM05D000495 ORTHO05D000357 8.3e-12 76.6 253 27.3
AT3G62710 Arabidopsis thaliana HOM05D000495 ORTHO05D000357 1.1e-11 76.3 281 25.6
Rhsim13G0072300 Rhododendron simsii HOM05D000495 ORTHO05D000357 1.4e-11 75.9 310 27.1
Ciclev10017853m.g Citrus clementina HOM05D000495 ORTHO05D000357 1.8e-11 75.5 313 24.9
Ciclev10018271m.g Citrus clementina HOM05D000495 ORTHO05D000357 1.8e-11 75.5 313 24.9
AL5G45460 Arabidopsis lyrata HOM05D000495 ORTHO05D000357 3.1e-11 74.7 281 24.9
Zm00001eb151890 Zea mays HOM05D000495 ORTHO05D000357 3.1e-11 74.7 262 26.3
QL01p026871 Quercus lobata HOM05D000495 ORTHO05D000357 4.1e-11 74.3 309 25.6
Aa31LG10G16660 Aethionema arabicum HOM05D000495 ORTHO05D000357 5.4e-11 73.9 281 25.6
Carub.0005s2938 Capsella rubella HOM05D000495 ORTHO05D000357 9.2e-11 73.2 281 24.9
Actinidia37790 Actinidia chinensis HOM05D000495 ORTHO05D000357 1.2e-10 72.8 309 24.3
vmacro02991 Vaccinium macrocarpon HOM05D000495 ORTHO05D000357 2.0e-10 72.0 310 25.2
Cpa.g.sc103.83 Carica papaya HOM05D000495 ORTHO05D000357 2.7e-10 71.6 308 23.1
TWI79G0491 Tripterygium wilfordii HOM05D000495 ORTHO05D000357 2.7e-10 71.6 259 25.9
TAR371G0902 Trochodendron aralioides HOM05D000495 ORTHO05D000357 2.7e-10 71.6 304 24.7
Potri.008G013700 Populus trichocarpa HOM05D000495 ORTHO05D000357 4.5e-10 70.9 308 24.0
CARHR191900 Cardamine hirsuta HOM05D000495 ORTHO05D000357 5.9e-10 70.5 260 26.2
TWI79G0304 Tripterygium wilfordii HOM05D000495 ORTHO05D000357 5.9e-10 70.5 259 26.6
Os03g0749300 Oryza sativa ssp. japonica HOM05D000495 ORTHO05D000357 7.8e-10 70.1 310 25.2
TWI79G0075 Tripterygium wilfordii HOM05D000495 ORTHO05D000357 7.8e-10 70.1 258 25.6
Thhalv10015493m.g Eutrema salsugineum HOM05D000495 ORTHO05D000357 1.0e-09 69.7 276 26.1
HanXRQChr01g0026341 Helianthus annuus HOM05D000495 ORTHO05D000357 1.0e-09 69.7 316 22.8
Rhsim13G0072500 Rhododendron simsii HOM05D000495 ORTHO05D000357 1.3e-09 69.3 333 25.2
CSS0025629 Camellia sinensis var. sinensis HOM05D000495 ORTHO05D000357 1.7e-09 68.9 308 23.4
HanXRQChr11g0347491 Helianthus annuus HOM05D000495 ORTHO05D000357 1.7e-09 68.9 306 23.9
SalBow6G7026 Salvia bowleyana HOM05D000495 ORTHO05D000357 1.7e-09 68.9 306 22.9
Cfa022226 Carpinus fangiana HOM05D000495 ORTHO05D000357 2.9e-09 68.2 373 23.9
Prupe.6G150400 Prunus persica HOM05D000495 ORTHO05D000357 2.9e-09 68.2 307 23.5
MBI11_g25047_MAGBIO Magnolia biondii HOM05D000495 ORTHO05D000357 6.6e-09 67.0 309 23.3
BcaNung05755 Brassica carinata HOM05D000495 ORTHO05D000357 8.6e-09 66.6 297 23.2
Carub.0006s1926 Capsella rubella HOM05D000495 ORTHO05D000357 8.6e-09 66.6 260 26.9
Os01g0771900 Oryza sativa ssp. japonica HOM05D000495 ORTHO05D000357 8.6e-09 66.6 259 24.7
BcaC04g19492 Brassica carinata HOM05D000495 ORTHO05D000357 1.1e-08 66.2 260 27.3
HanXRQChr01g0026351 Helianthus annuus HOM05D000495 ORTHO05D000357 1.1e-08 66.2 309 23.0
FAN16G3480 Fragaria x ananassa HOM05D000495 ORTHO05D000357 1.5e-08 65.9 309 24.9
Carub.0006s1927 Capsella rubella HOM05D000495 ORTHO05D000357 1.9e-08 65.5 260 26.9
Prupe.6G150500 Prunus persica HOM05D000495 ORTHO05D000357 1.9e-08 65.5 307 22.8
QL01p018719 Quercus lobata HOM05D000495 ORTHO05D000357 1.9e-08 65.5 305 24.3
THA.LOC104803070 Tarenaya hassleriana HOM05D000495 ORTHO05D000357 1.9e-08 65.5 257 24.1
AT5G20950 Arabidopsis thaliana HOM05D000495 ORTHO05D000357 2.5e-08 65.1 260 27.3
BolC3t13660H Brassica oleracea HOM05D000495 ORTHO05D000357 2.5e-08 65.1 301 24.3
ClCG00G005450 Citrullus lanatus HOM05D000495 ORTHO05D000357 2.5e-08 65.1 261 26.1
ClCG10G013570 Citrullus lanatus HOM05D000495 ORTHO05D000357 2.5e-08 65.1 261 26.1
ClCG10G013580 Citrullus lanatus HOM05D000495 ORTHO05D000357 2.5e-08 65.1 261 26.1
AL6G32520 Arabidopsis lyrata HOM05D000495 ORTHO05D000357 3.3e-08 64.7 260 26.9
Prupe.6G150000 Prunus persica HOM05D000495 ORTHO05D000357 4.3e-08 64.3 316 23.7
C03p11900 Brassica napus HOM05D000495 ORTHO05D000357 5.6e-08 63.9 299 23.1
Psat3g088160 Pisum sativum HOM05D000495 ORTHO05D000357 5.6e-08 63.9 308 22.7
Medtr7g086010 Medicago truncatula HOM05D000495 ORTHO05D000357 7.3e-08 63.5 265 25.3
Sp6g23580 Schrenkiella parvula HOM05D000495 ORTHO05D000357 7.3e-08 63.5 259 26.3
TPR.G26334 Trifolium pratense HOM05D000495 ORTHO05D000357 7.3e-08 63.5 264 26.1
MELO3C026610.2 Cucumis melo HOM05D000495 ORTHO05D000357 9.5e-08 63.2 309 24.9
SEGI_15681 Sequoiadendron giganteum HOM05D000495 ORTHO05D000357 1.6e-07 62.4 260 23.8
THA.LOC104817621 Tarenaya hassleriana HOM05D000495 ORTHO05D000357 1.6e-07 62.4 310 22.9
HanXRQChr01g0028251 Helianthus annuus HOM05D000495 ORTHO05D000357 2.1e-07 62.0 241 24.1
HPP92_006630 Vanilla planifolia HOM05D000495 ORTHO05D000357 2.1e-07 62.0 263 26.2
QL04p049742 Quercus lobata HOM05D000495 ORTHO05D000357 2.8e-07 61.6 253 25.3
GSVIVG01012185001 Vitis vinifera HOM05D000495 ORTHO05D000357 2.8e-07 61.6 308 23.4
SGA_v2.0_scaffold73G24503 Striga asiatica HOM05D000495 ORTHO05D000357 3.6e-07 61.2 257 24.9
Actinidia03949 Actinidia chinensis HOM05D000495 ORTHO05D000357 4.7e-07 60.8 306 22.9
C09p55160 Brassica napus HOM05D000495 ORTHO05D000357 4.7e-07 60.8 263 27.0
BolC9t58377H Brassica oleracea HOM05D000495 ORTHO05D000357 4.7e-07 60.8 263 27.0
MD11G1177900 Malus domestica HOM05D000495 ORTHO05D000357 4.7e-07 60.8 307 24.4
Aa31LG1G13820 Aethionema arabicum HOM05D000495 ORTHO05D000357 6.1e-07 60.5 253 25.7
Haze_23624 Corylus avellana HOM05D000495 ORTHO05D000357 6.1e-07 60.5 300 24.3
Sed0000207 Sechium edule HOM05D000495 ORTHO05D000357 6.1e-07 60.5 268 26.5
Nn2g14479 Nelumbo nucifera HOM05D000495 ORTHO05D000357 8.0e-07 60.1 308 23.7
Hund16406 Selenicereus undatus HOM05D000495 ORTHO05D000357 8.0e-07 60.1 272 25.4
TPR.G13873 Trifolium pratense HOM05D000495 ORTHO05D000357 8.0e-07 60.1 307 22.5
Actinidia03948 Actinidia chinensis HOM05D000495 ORTHO05D000357 1.4e-06 59.3 304 21.7
EL10Ac8g20610 Beta vulgaris HOM05D000495 ORTHO05D000357 1.4e-06 59.3 260 23.8
ClCG11G003950 Citrullus lanatus HOM05D000495 ORTHO05D000357 1.4e-06 59.3 303 22.8
SGA_v2.0_scaffold73G24505 Striga asiatica HOM05D000495 ORTHO05D000357 1.4e-06 59.3 258 25.6
CDE07G1002 Ceratophyllum demersum HOM05D001013 ORTHO05D001703 1.8e-06 58.9 293 24.6
DCAR_020666 Daucus carota HOM05D000495 ORTHO05D000357 1.8e-06 58.9 309 23.0
Sc09g0004850 Simmondsia chinensis HOM05D000495 ORTHO05D000357 1.8e-06 58.9 261 26.1
VMungo0464G0542 Vigna mungo HOM05D000495 ORTHO05D000357 2.3e-06 58.5 262 24.4
EL10Ac6g15611 Beta vulgaris HOM05D000495 ORTHO05D000357 3.1e-06 58.2 256 23.8
Medtr7g086030 Medicago truncatula HOM05D000495 ORTHO05D000357 3.1e-06 58.2 308 22.7
Eucgr.J00604 Eucalyptus grandis HOM05D000495 ORTHO05D000357 4.0e-06 57.8 261 26.1
SGA_v2.0_scaffold112G31658 Striga asiatica HOM05D000495 ORTHO05D000357 4.0e-06 57.8 299 21.4
HanXRQChr07g0196061 Helianthus annuus HOM05D000495 ORTHO05D000357 5.2e-06 57.4 308 23.1
HanXRQChr07g0196171 Helianthus annuus HOM05D000495 ORTHO05D000357 5.2e-06 57.4 308 23.1
SGA_v2.0_scaffold112G31655 Striga asiatica HOM05D000495 ORTHO05D000357 5.2e-06 57.4 259 24.7
Pp3c24_19980 Physcomitrium patens HOM05D000495 ORTHO05D000357 6.8e-06 57.0 258 24.4
Phvul.007G250300 Phaseolus vulgaris HOM05D000495 ORTHO05D000357 8.9e-06 56.6 306 21.9


User provided reference genes

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