Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g48397 Chara braunii HOM05D006308 ORTHO05D007820 8.7e-108 393.7 201 100.0
CDE06G0902 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 2.1e-16 90.1 89 56.2
THA.LOC104822752 Tarenaya hassleriana HOM05D006308 ORTHO05D007820 3.5e-16 89.4 82 56.1
C05p54980 Brassica napus HOM05D006308 ORTHO05D007820 7.8e-16 88.2 107 47.7
BolC5t34167H Brassica oleracea HOM05D006308 ORTHO05D007820 7.8e-16 88.2 107 47.7
Potri.001G458600 Populus trichocarpa HOM05D006308 ORTHO05D007820 1.0e-15 87.8 110 47.3
BraA05t22456Z Brassica rapa HOM05D006308 ORTHO05D007820 1.3e-15 87.4 107 47.7
Potri.011G142900 Populus trichocarpa HOM05D006308 ORTHO05D007820 1.7e-15 87.0 112 47.3
A05p36560 Brassica napus HOM05D006308 ORTHO05D007820 2.3e-15 86.7 107 47.7
Manes.14G016400 Manihot esculenta HOM05D006308 ORTHO05D007820 2.3e-15 86.7 163 40.5
Mapoly0031s0088 Marchantia polymorpha HOM05D006308 ORTHO05D007820 3.0e-15 86.3 106 52.8
Aqoxy5G00928 Aquilegia oxysepala HOM05D006308 ORTHO05D007820 3.9e-15 85.9 82 53.7
EL10Ac2g03321 Beta vulgaris HOM05D006308 ORTHO05D007820 3.9e-15 85.9 137 40.1
BcaC09g48280 Brassica carinata HOM05D006308 ORTHO05D007820 3.9e-15 85.9 112 44.6
C01p52210 Brassica napus HOM05D006308 ORTHO05D007820 3.9e-15 85.9 112 44.6
BolC1t05161H Brassica oleracea HOM05D006308 ORTHO05D007820 3.9e-15 85.9 112 44.6
PGR083G0385 Punica granatum HOM05D006308 ORTHO05D007820 3.9e-15 85.9 134 39.6
MSTRG.7060 Avicennia marina HOM05D006308 ORTHO05D007820 5.1e-15 85.5 82 53.7
BcaC05g29223 Brassica carinata HOM05D006308 ORTHO05D007820 5.1e-15 85.5 78 55.1
MELO3C016177.2 Cucumis melo HOM05D006308 ORTHO05D007820 5.1e-15 85.5 78 55.1
ATR0605G149 Amborella trichopoda HOM05D006308 ORTHO05D007820 6.6e-15 85.1 82 52.4
Migut.M01556 Erythranthe guttata HOM05D006308 ORTHO05D007820 6.6e-15 85.1 82 51.2
MBI04_g08705_MAGBIO Magnolia biondii HOM05D006308 ORTHO05D007820 6.6e-15 85.1 82 52.4
MD10G1202500 Malus domestica HOM05D006308 ORTHO05D007820 6.6e-15 85.1 82 52.4
PSO017G0504 Papaver somniferum HOM05D006308 ORTHO05D007820 6.6e-15 85.1 85 52.9
ClCG07G010660 Citrullus lanatus HOM05D006308 ORTHO05D007820 8.7e-15 84.7 83 55.4
CsaV3_4G007640 Cucumis sativus L. HOM05D006308 ORTHO05D007820 8.7e-15 84.7 82 52.4
Phvul.005G057100 Phaseolus vulgaris HOM05D006308 ORTHO05D007820 8.7e-15 84.7 118 40.7
GSVIVG01020411001 Vitis vinifera HOM05D006308 ORTHO05D007820 8.7e-15 84.7 82 54.9
Eucgr.F01457 Eucalyptus grandis HOM05D006308 ORTHO05D007820 1.1e-14 84.3 82 54.9
Thhalv10021431m.g Eutrema salsugineum HOM05D006308 ORTHO05D007820 1.1e-14 84.3 108 46.3
Sabra16G0310800 Salix brachista HOM05D006308 ORTHO05D007820 1.1e-14 84.3 87 50.6
SalBow8G4544 Salvia bowleyana HOM05D006308 ORTHO05D007820 1.1e-14 84.3 82 50.0
SGA_v2.0_scaffold186G40217 Striga asiatica HOM05D006308 ORTHO05D007820 1.1e-14 84.3 82 51.2
A01p40570 Brassica napus HOM05D006308 ORTHO05D007820 1.5e-14 84.0 113 44.2
BraA01t04092Z Brassica rapa HOM05D006308 ORTHO05D007820 1.5e-14 84.0 113 44.2
CARHR087450 Cardamine hirsuta HOM05D006308 ORTHO05D007820 1.5e-14 84.0 108 45.4
PSO170G1595 Papaver somniferum HOM05D006308 ORTHO05D007820 1.5e-14 84.0 85 52.9
TAR381G0490 Trochodendron aralioides HOM05D006308 ORTHO05D007820 1.5e-14 84.0 143 39.2
AUR62043126 Chenopodium quinoa HOM05D006308 ORTHO05D007820 1.9e-14 83.6 82 52.4
Dinv42509 Davidia involucrata HOM05D006308 ORTHO05D007820 1.9e-14 83.6 82 51.2
Lalb_Chr20g0108751 Lupinus albus HOM05D006308 ORTHO05D007820 1.9e-14 83.6 111 45.9
Psat1g011160 Pisum sativum HOM05D006308 ORTHO05D007820 1.9e-14 83.6 117 41.9
Sp3g11070 Schrenkiella parvula HOM05D006308 ORTHO05D007820 1.9e-14 83.6 154 38.3
vmacro11665 Vaccinium macrocarpon HOM05D006308 ORTHO05D007820 1.9e-14 83.6 78 55.1
Carub.0005s0924 Capsella rubella HOM05D006308 ORTHO05D007820 2.5e-14 83.2 113 43.4
Gohir.A04G049000 Gossypium hirsutum HOM05D006308 ORTHO05D007820 2.5e-14 83.2 97 50.5
Gorai.009G355200 Gossypium raimondii HOM05D006308 ORTHO05D007820 2.5e-14 83.2 97 50.5
Sed0010671 Sechium edule HOM05D006308 ORTHO05D007820 2.5e-14 83.2 83 54.2
Thecc.07G152500 Theobroma cacao HOM05D006308 ORTHO05D007820 2.5e-14 83.2 97 50.5
Aa31LG8G150 Aethionema arabicum HOM05D006308 ORTHO05D007820 3.3e-14 82.8 98 48.0
AT3G12930 Arabidopsis thaliana HOM05D006308 ORTHO05D007820 3.3e-14 82.8 108 44.4
CiPaw.12G004900 Carya illinoinensis HOM05D006308 ORTHO05D007820 3.3e-14 82.8 113 43.4
FAN16G0301 Fragaria x ananassa HOM05D006308 ORTHO05D007820 3.3e-14 82.8 82 50.0
HanXRQChr10g0305791 Helianthus annuus HOM05D006308 ORTHO05D007820 3.3e-14 82.8 82 50.0
CDE08G1673 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 4.3e-14 82.4 95 48.4
Peaxi162Scf00452g00832 Petunia axillaris HOM05D006308 ORTHO05D007820 4.3e-14 82.4 109 45.9
Rhsim06G0239000 Rhododendron simsii HOM05D006308 ORTHO05D007820 4.3e-14 82.4 82 51.2
TWI39G0290 Tripterygium wilfordii HOM05D006308 ORTHO05D007820 4.3e-14 82.4 112 45.5
unitig_46.g18521 Utricularia gibba HOM05D006308 ORTHO05D007820 4.3e-14 82.4 83 54.2
Cc05_g16080 Coffea canephora HOM05D006308 ORTHO05D007820 5.6e-14 82.0 82 51.2
DCAR_016822 Daucus carota HOM05D006308 ORTHO05D007820 5.6e-14 82.0 82 52.4
Sc06g0001530 Simmondsia chinensis HOM05D006308 ORTHO05D007820 5.6e-14 82.0 82 51.2
Atru.chr2.1759 Acer truncatum HOM05D006308 ORTHO05D007820 7.3e-14 81.6 82 51.2
AagrBONN_evm.TU.Sc2ySwM_228.3592 Anthoceros agrestis HOM05D006308 ORTHO05D007820 7.3e-14 81.6 139 40.3
CSS0031885 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 7.3e-14 81.6 82 51.2
CSS0041769 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 7.3e-14 81.6 82 51.2
AL3G24610 Arabidopsis lyrata HOM05D006308 ORTHO05D007820 9.6e-14 81.3 93 48.4
Nn6g31547 Nelumbo nucifera HOM05D006308 ORTHO05D007820 9.6e-14 81.3 82 51.2
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 9.6e-14 81.3 133 39.1
VMungo1080G0665 Vigna mungo HOM05D006308 ORTHO05D007820 9.6e-14 81.3 118 39.0
Lj1A905G40 Lonicera japonica HOM05D006308 ORTHO05D007820 1.3e-13 80.9 82 51.2
Lj3g0010937 Lotus japonicus HOM05D006308 ORTHO05D007820 1.3e-13 80.9 160 38.1
RcHm_v2.0_Chr5g0026561 Rosa chinensis HOM05D006308 ORTHO05D007820 1.3e-13 80.9 82 50.0
Ah.16g106540 Amaranthus hybridus HOM05D006308 ORTHO05D007820 1.6e-13 80.5 82 50.0
CAN.G943.39 Capsicum annuum HOM05D006308 ORTHO05D007820 1.6e-13 80.5 82 51.2
Ca_03675_v3 Cicer arietinum L. HOM05D006308 ORTHO05D007820 1.6e-13 80.5 118 40.7
Medtr2g069470 Medicago truncatula HOM05D006308 ORTHO05D007820 1.6e-13 80.5 117 39.3
QL08p064492 Quercus lobata HOM05D006308 ORTHO05D007820 1.6e-13 80.5 82 50.0
TPR.G9745 Trifolium pratense HOM05D006308 ORTHO05D007820 1.6e-13 80.5 117 41.0
FvH4_3g15760 Fragaria vesca HOM05D006308 ORTHO05D007820 2.1e-13 80.1 82 48.8
FAN21G3038 Fragaria x ananassa HOM05D006308 ORTHO05D007820 2.1e-13 80.1 82 48.8
Lsat_1_v5_gn_5_125241 Lactuca sativa HOM05D006308 ORTHO05D007820 2.1e-13 80.1 82 50.0
SEGI_12516 Sequoiadendron giganteum HOM05D006308 ORTHO05D007820 2.1e-13 80.1 90 47.8
Gohir.D05G331300 Gossypium hirsutum HOM05D006308 ORTHO05D007820 2.8e-13 79.7 97 48.5
arahy.Tifrunner.gnm1.ann1.1EF43V Arachis hypogaea HOM05D006308 ORTHO05D007820 4.8e-13 79.0 137 37.2
CANSAT80G1356 Cannabis sativa HOM05D006308 ORTHO05D007820 4.8e-13 79.0 110 44.5
Ciclev10021874m.g Citrus clementina HOM05D006308 ORTHO05D007820 4.8e-13 79.0 82 50.0
Pp3c9_2790 Physcomitrium patens HOM05D006308 ORTHO05D007820 4.8e-13 79.0 94 42.6
Prupe.4G139700 Prunus persica HOM05D006308 ORTHO05D007820 4.8e-13 79.0 82 48.8
ECA234G3728 Erigeron canadensis HOM05D006308 ORTHO05D007820 6.2e-13 78.6 82 48.8
Sed0016869 Sechium edule HOM05D006308 ORTHO05D007820 6.2e-13 78.6 83 54.2
COL.COLO4_07328 Corchorus olitorius HOM05D006308 ORTHO05D007820 8.1e-13 78.2 117 46.2
FAN11G0128 Fragaria x ananassa HOM05D006308 ORTHO05D007820 8.1e-13 78.2 176 34.1
Duzib213G0994 Durio zibethinus HOM05D006308 ORTHO05D007820 1.1e-12 77.8 93 47.3
Glyma.08G172200 Glycine max HOM05D006308 ORTHO05D007820 1.1e-12 77.8 147 34.7
Glyma.15G255800 Glycine max HOM05D006308 ORTHO05D007820 1.1e-12 77.8 121 38.8
Solyc07g066460.3 Solanum lycopersicum HOM05D006308 ORTHO05D007820 1.1e-12 77.8 82 50.0
Sopen07g034640 Solanum pennellii HOM05D006308 ORTHO05D007820 1.1e-12 77.8 82 50.0
PGSC0003DMG400022127 Solanum tuberosum HOM05D006308 ORTHO05D007820 1.1e-12 77.8 82 50.0
SMO367G0472 Selaginella moellendorffii HOM05D006308 ORTHO05D007820 1.8e-12 77.0 82 47.6
HPP92_015477 Vanilla planifolia HOM05D006308 ORTHO05D007820 4.0e-12 75.9 164 34.1
Hma1.2p1_0334F.1_g128750 Hydrangea macrophylla HOM05D006308 ORTHO05D007820 6.9e-12 75.1 82 48.8
FAN25G0513 Fragaria x ananassa HOM05D006308 ORTHO05D007820 9.0e-12 74.7 139 37.4
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.5e-11 73.9 82 48.8
Os09g0493600 Oryza sativa ssp. japonica HOM05D006308 ORTHO05D007820 3.4e-11 72.8 83 50.6
Hund12461 Selenicereus undatus HOM05D006308 ORTHO05D007820 7.6e-11 71.6 94 42.6
Nn3g18400 Nelumbo nucifera HOM05D006308 ORTHO05D007820 4.9e-10 68.9 82 45.1
Sabra11G0127800 Salix brachista HOM05D006308 ORTHO05D007820 1.9e-09 67.0 127 36.2
Oeu051665.1 Olea europaea HOM05D006308 ORTHO05D007820 2.4e-09 66.6 45 66.7
Haze_08539 Corylus avellana HOM05D006308 ORTHO05D007820 9.3e-09 64.7 45 66.7
arahy.Tifrunner.gnm1.ann1.HXV25C Arachis hypogaea HOM05D006308 ORTHO05D007820 1.2e-08 64.3 89 43.8
BcaB06g25499 Brassica carinata HOM05D006308 ORTHO05D007820 2.7e-08 63.2 156 32.7
A01p40580 Brassica napus HOM05D006308 ORTHO05D007820 3.9e-07 59.3 98 38.8
Manes.06G172000 Manihot esculenta HOM05D006308 ORTHO05D007820 6.7e-07 58.5 65 52.3


User provided reference genes

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