Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g46888 Chara braunii HOM05D002705 ORTHO05D004955 0.0e+00 2537.7 1480 100.0
Aqoxy7G00864 Aquilegia oxysepala HOM05D002705 ORTHO05D004955 1.9e-42 179.5 148 60.8
AagrBONN_evm.TU.Sc2ySwM_117.709 Anthoceros agrestis HOM05D002705 ORTHO05D004955 3.3e-42 178.7 160 58.8
Nitab4.5_0010058g0010 Nicotiana tabacum HOM05D002705 ORTHO05D004955 2.8e-41 175.6 134 66.4
Pp3c1_29170 Physcomitrium patens HOM05D002705 ORTHO05D004955 2.8e-41 175.6 126 69.8
HPP92_003517 Vanilla planifolia HOM05D002705 ORTHO05D004955 2.8e-41 175.6 127 67.7
Sopen03g024730 Solanum pennellii HOM05D002705 ORTHO05D004955 3.6e-41 175.3 145 62.1
Solyc03g093850.2 Solanum lycopersicum HOM05D002705 ORTHO05D004955 4.7e-41 174.9 165 55.8
Mapoly0067s0049 Marchantia polymorpha HOM05D002705 ORTHO05D004955 8.0e-41 174.1 245 44.5
SMO118G0423 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 8.0e-41 174.1 127 69.3
PSO675G1384 Papaver somniferum HOM05D002705 ORTHO05D004955 1.0e-40 173.7 126 65.9
ATR0665G329 Amborella trichopoda HOM05D002705 ORTHO05D004955 1.8e-40 172.9 159 59.1
SGA_v2.0_scaffold352G49687 Striga asiatica HOM05D002705 ORTHO05D004955 1.8e-40 172.9 140 62.1
TWI39G0103 Tripterygium wilfordii HOM05D002705 ORTHO05D004955 2.3e-40 172.6 147 60.5
FAN03G2179 Fragaria x ananassa HOM05D002705 ORTHO05D004955 3.0e-40 172.2 159 59.1
vmacro06848 Vaccinium macrocarpon HOM05D002705 ORTHO05D004955 3.0e-40 172.2 155 58.7
FvH4_7g26710 Fragaria vesca HOM05D002705 ORTHO05D004955 6.8e-40 171.0 159 58.5
RcHm_v2.0_Chr1g0373301 Rosa chinensis HOM05D002705 ORTHO05D004955 6.8e-40 171.0 140 64.3
SMO263G0015 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 6.8e-40 171.0 127 68.5
CiPaw.07G183200 Carya illinoinensis HOM05D002705 ORTHO05D004955 8.9e-40 170.6 125 66.4
Oeu044165.1 Olea europaea HOM05D002705 ORTHO05D004955 8.9e-40 170.6 140 62.1
Nn1g00769 Nelumbo nucifera HOM05D002705 ORTHO05D004955 1.2e-39 170.2 132 63.6
Prupe.2G270600 Prunus persica HOM05D002705 ORTHO05D004955 1.2e-39 170.2 140 62.1
FAN01G1045 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.5e-39 169.9 168 57.1
MD07G1241700 Malus domestica HOM05D002705 ORTHO05D004955 1.5e-39 169.9 140 62.9
Rhsim03G0158700 Rhododendron simsii HOM05D002705 ORTHO05D004955 1.5e-39 169.9 155 57.4
CANSAT56G1220 Cannabis sativa HOM05D002705 ORTHO05D004955 2.0e-39 169.5 154 58.4
Gohir.A09G248500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 2.0e-39 169.5 149 59.1
Os07g0492100 Oryza sativa ssp. japonica HOM05D002705 ORTHO05D004955 2.0e-39 169.5 138 61.6
Gohir.D09G249500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 2.6e-39 169.1 149 59.1
Gorai.006G273800 Gossypium raimondii HOM05D002705 ORTHO05D004955 2.6e-39 169.1 149 59.1
GSVIVG01013853001 Vitis vinifera HOM05D002705 ORTHO05D004955 2.6e-39 169.1 125 65.6
Migut.F01210 Erythranthe guttata HOM05D002705 ORTHO05D004955 3.4e-39 168.7 131 63.4
FAN01G0508 Fragaria x ananassa HOM05D002705 ORTHO05D004955 3.4e-39 168.7 143 64.3
FAN05G3181 Fragaria x ananassa HOM05D002705 ORTHO05D004955 3.4e-39 168.7 168 56.5
Actinidia13623 Actinidia chinensis HOM05D002705 ORTHO05D004955 4.4e-39 168.3 141 60.3
C07p54050 Brassica napus HOM05D002705 ORTHO05D004955 4.4e-39 168.3 144 61.1
BolC7t45891H Brassica oleracea HOM05D002705 ORTHO05D004955 4.4e-39 168.3 144 61.1
Potri.012G114100 Populus trichocarpa HOM05D002705 ORTHO05D004955 5.7e-39 167.9 133 62.4
unitig_578.g16613 Utricularia gibba HOM05D002705 ORTHO05D004955 5.7e-39 167.9 137 59.9
Cc00_g24340 Coffea canephora HOM05D002705 ORTHO05D004955 7.5e-39 167.5 134 64.9
FAN06G0843 Fragaria x ananassa HOM05D002705 ORTHO05D004955 7.5e-39 167.5 168 56.5
FAN17G2187 Fragaria x ananassa HOM05D002705 ORTHO05D004955 7.5e-39 167.5 168 56.5
Psat6g140240 Pisum sativum HOM05D002705 ORTHO05D004955 7.5e-39 167.5 126 62.7
QL09p027408 Quercus lobata HOM05D002705 ORTHO05D004955 7.5e-39 167.5 200 49.5
Ca_09785_v3 Cicer arietinum L. HOM05D002705 ORTHO05D004955 9.8e-39 167.2 126 64.3
COL.COLO4_37311 Corchorus olitorius HOM05D002705 ORTHO05D004955 9.8e-39 167.2 126 65.9
Thecc.03G145700 Theobroma cacao HOM05D002705 ORTHO05D004955 9.8e-39 167.2 132 64.4
Atru.chr6.1980 Acer truncatum HOM05D002705 ORTHO05D004955 1.3e-38 166.8 126 63.5
Atru.chr6.2006 Acer truncatum HOM05D002705 ORTHO05D004955 1.3e-38 166.8 126 63.5
Cpa.g.sc13.232 Carica papaya HOM05D002705 ORTHO05D004955 1.3e-38 166.8 134 61.2
MD07G1244300 Malus domestica HOM05D002705 ORTHO05D004955 1.3e-38 166.8 142 61.3
Medtr1g072800 Medicago truncatula HOM05D002705 ORTHO05D004955 1.3e-38 166.8 126 63.5
Ciclev10033740m.g Citrus clementina HOM05D002705 ORTHO05D004955 1.7e-38 166.4 126 64.3
BcaC06g32837 Brassica carinata HOM05D002705 ORTHO05D004955 2.2e-38 166.0 144 60.4
BraA03t14645Z Brassica rapa HOM05D002705 ORTHO05D004955 2.2e-38 166.0 144 60.4
FAN10G0038 Fragaria x ananassa HOM05D002705 ORTHO05D004955 2.2e-38 166.0 133 65.4
Lsat_1_v5_gn_0_9880 Lactuca sativa HOM05D002705 ORTHO05D004955 2.2e-38 166.0 125 67.2
MD07G1243600 Malus domestica HOM05D002705 ORTHO05D004955 2.2e-38 166.0 140 61.4
SEGI_26843 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 2.2e-38 166.0 153 56.2
TAR636G2282 Trochodendron aralioides HOM05D002705 ORTHO05D004955 2.2e-38 166.0 133 61.7
Ah.02g115400 Amaranthus hybridus HOM05D002705 ORTHO05D004955 2.8e-38 165.6 125 65.6
HanXRQChr15g0493601 Helianthus annuus HOM05D002705 ORTHO05D004955 2.8e-38 165.6 125 66.4
A03p55770 Brassica napus HOM05D002705 ORTHO05D004955 3.7e-38 165.2 140 61.4
EL10As1g23078 Beta vulgaris HOM05D002705 ORTHO05D004955 4.9e-38 164.9 144 59.7
ClCG01G004930 Citrullus lanatus HOM05D002705 ORTHO05D004955 4.9e-38 164.9 126 64.3
Dinv34540 Davidia involucrata HOM05D002705 ORTHO05D004955 4.9e-38 164.9 134 61.9
Cfa013602 Carpinus fangiana HOM05D002705 ORTHO05D004955 6.3e-38 164.5 126 64.3
Glyma.20G198400 Glycine max HOM05D002705 ORTHO05D004955 6.3e-38 164.5 126 63.5
DCAR_014643 Daucus carota HOM05D002705 ORTHO05D004955 8.3e-38 164.1 126 63.5
Sed0003657 Sechium edule HOM05D002705 ORTHO05D004955 8.3e-38 164.1 126 63.5
Haze_22224 Corylus avellana HOM05D002705 ORTHO05D004955 1.1e-37 163.7 126 63.5
Hma1.2p1_2119F.1_g314370 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 1.4e-37 163.3 126 61.9
Lj5g0005183 Lotus japonicus HOM05D002705 ORTHO05D004955 1.4e-37 163.3 126 63.5
AUR62042388 Chenopodium quinoa HOM05D002705 ORTHO05D004955 1.8e-37 162.9 146 58.9
Aa31LG7G10510 Aethionema arabicum HOM05D002705 ORTHO05D004955 2.4e-37 162.5 138 60.9
Phvul.L001885 Phaseolus vulgaris HOM05D002705 ORTHO05D004955 2.4e-37 162.5 140 58.6
PGR142G4199 Punica granatum HOM05D002705 ORTHO05D004955 2.4e-37 162.5 126 62.7
ECA232G4016 Erigeron canadensis HOM05D002705 ORTHO05D004955 4.1e-37 161.8 156 55.1
MD07G1243100 Malus domestica HOM05D002705 ORTHO05D004955 5.4e-37 161.4 125 64.8
AL7G28030 Arabidopsis lyrata HOM05D002705 ORTHO05D004955 7.0e-37 161.0 147 58.5
Thhalv10024258m.g Eutrema salsugineum HOM05D002705 ORTHO05D004955 7.0e-37 161.0 125 64.8
Eucgr.K00116 Eucalyptus grandis HOM05D002705 ORTHO05D004955 9.2e-37 160.6 126 61.1
Lalb_Chr06g0169611 Lupinus albus HOM05D002705 ORTHO05D004955 9.2e-37 160.6 126 62.7
MD07G1244800 Malus domestica HOM05D002705 ORTHO05D004955 9.2e-37 160.6 140 59.3
Sp7g23120 Schrenkiella parvula HOM05D002705 ORTHO05D004955 9.2e-37 160.6 125 64.8
THA.LOC104825051 Tarenaya hassleriana HOM05D002705 ORTHO05D004955 1.6e-36 159.8 134 61.9
AT4G25120 Arabidopsis thaliana HOM05D002705 ORTHO05D004955 2.7e-36 159.1 125 64.8
SalBow2G1886 Salvia bowleyana HOM05D002705 ORTHO05D004955 2.7e-36 159.1 142 57.0
TPR.G18561 Trifolium pratense HOM05D002705 ORTHO05D004955 5.9e-36 157.9 140 57.1
Carub.0007s1591 Capsella rubella HOM05D002705 ORTHO05D004955 1.3e-35 156.8 125 64.0
MELO3C005443.2 Cucumis melo HOM05D002705 ORTHO05D004955 2.3e-35 156.0 214 46.7
CsaV3_5G005160 Cucumis sativus L. HOM05D002705 ORTHO05D004955 2.9e-35 155.6 215 45.6
Sabra12G0083000 Salix brachista HOM05D002705 ORTHO05D004955 7.3e-34 151.0 181 48.1
SEGI_07071 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 1.8e-32 146.4 147 53.1
Hma1.2p1_2119F.1_g314360 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 7.5e-31 141.0 170 46.5
Peaxi162Scf00073g01730 Petunia axillaris HOM05D002705 ORTHO05D004955 3.5e-28 132.1 100 67.0
CSS0042603 Camellia sinensis var. sinensis HOM05D002705 ORTHO05D004955 6.0e-28 131.3 160 48.8
Manes.14G040900 Manihot esculenta HOM05D002705 ORTHO05D004955 1.2e-25 123.6 99 61.6
Lj8C49G2 Lonicera japonica HOM05D002705 ORTHO05D004955 8.0e-25 120.9 134 51.5
MD07G1245700 Malus domestica HOM05D002705 ORTHO05D004955 1.2e-23 117.1 91 63.7
Mapoly0020s0153 Marchantia polymorpha HOM05D002705 ORTHO05D004955 1.4e-16 93.6 131 41.2
MCO05G634 Micromonas commoda HOM05D002705 ORTHO05D004955 1.5e-15 90.1 123 39.8
Pp3s32_280 Physcomitrium patens HOM05D020685 ORTHO05D022318 4.4e-15 88.6 148 37.2
PRCOL_00004767 Prasinoderma coloniale HOM05D002705 ORTHO05D004955 3.7e-14 85.5 110 42.7
Lsat_1_v5_gn_5_183700 Lactuca sativa HOM05D002705 ORTHO05D021366 8.3e-14 84.3 69 62.3
AagrBONN_evm.TU.Sc2ySwM_362.2714 Anthoceros agrestis HOM05D002705 ORTHO05D004955 1.1e-13 84.0 139 33.1
AagrBONN_evm.TU.Sc2ySwM_368.2221 Anthoceros agrestis HOM05D002705 ORTHO05D004955 1.2e-12 80.5 127 38.6
CBR_g22322 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-11 76.6 125 35.2
Cre07.g343333 Chlamydomonas reinhardtii HOM05D002705 ORTHO05D004955 3.9e-11 75.5 127 37.0
Pp3s70_120 Physcomitrium patens HOM05D002705 ORTHO05D004955 5.1e-11 75.1 94 44.7
Cfa026800 Carpinus fangiana HOM05D002705 ORTHO05D004955 3.3e-10 72.4 85 45.9
ATR0789G167 Amborella trichopoda HOM05D002705 ORTHO05D004955 7.3e-10 71.2 121 36.4
Cre07.g312250 Chlamydomonas reinhardtii HOM05D002705 ORTHO05D004955 7.3e-10 71.2 93 40.9
SMO222G0004 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 3.6e-09 68.9 46 69.6
Cre07.g314400 Chlamydomonas reinhardtii HOM05D002705 ORTHO05D004955 3.8e-06 58.9 142 36.6
CBR_g26524 Chara braunii HOM05D002705 ORTHO05D004955 4.9e-06 58.5 116 35.3


User provided reference genes

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