Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3709 Chara braunii HOM05D000246 ORTHO05D008363 3.0e-128 461.8 230 100.0
SMO118G0075 Selaginella moellendorffii HOM05D000246 ORTHO05D008363 5.2e-40 168.7 212 40.1
Pp3c11_4840 Physcomitrium patens HOM05D000246 ORTHO05D008363 6.0e-36 155.2 215 36.7
Aa31sc262G10 Aethionema arabicum HOM05D000246 ORTHO05D008363 5.1e-35 152.1 205 38.0
Mapoly0097s0064 Marchantia polymorpha HOM05D000246 ORTHO05D008363 1.5e-34 150.6 222 39.6
THA.LOC104820520 Tarenaya hassleriana HOM05D000246 ORTHO05D008363 1.6e-33 147.1 197 39.6
AT1G27880 Arabidopsis thaliana HOM05D000246 ORTHO05D008363 1.1e-32 144.4 192 38.0
Carub.0001s2633 Capsella rubella HOM05D000246 ORTHO05D008363 3.1e-32 142.9 192 37.5
Thhalv10006736m.g Eutrema salsugineum HOM05D000246 ORTHO05D008363 3.4e-31 139.4 192 37.0
GSVIVG01010342001 Vitis vinifera HOM05D000246 ORTHO05D008363 4.4e-31 139.0 201 36.3
TAR629G2337 Trochodendron aralioides HOM05D000246 ORTHO05D008363 5.8e-31 138.7 213 36.6
Duzib251G0641 Durio zibethinus HOM05D000246 ORTHO05D008363 7.6e-31 138.3 187 38.0
AL1G41360 Arabidopsis lyrata HOM05D000246 ORTHO05D008363 9.9e-31 137.9 192 37.0
Aqoxy5G03513 Aquilegia oxysepala HOM05D000246 ORTHO05D008363 3.8e-30 136.0 202 36.6
Nn4g22403 Nelumbo nucifera HOM05D000246 ORTHO05D008363 4.9e-30 135.6 200 36.0
Gohir.A01G156200 Gossypium hirsutum HOM05D000246 ORTHO05D008363 6.4e-30 135.2 184 37.5
Os04g0486800 Oryza sativa ssp. japonica HOM05D000246 ORTHO05D008363 6.4e-30 135.2 199 35.7
Gohir.D01G154200 Gossypium hirsutum HOM05D000246 ORTHO05D008363 8.4e-30 134.8 195 35.9
Gorai.002G190800 Gossypium raimondii HOM05D000246 ORTHO05D008363 8.4e-30 134.8 195 35.9
Sp1g24070 Schrenkiella parvula HOM05D000246 ORTHO05D008363 1.1e-29 134.4 196 36.2
Thecc.02G274400 Theobroma cacao HOM05D000246 ORTHO05D008363 1.1e-29 134.4 190 34.2
BcaB03g13967 Brassica carinata HOM05D000246 ORTHO05D008363 1.9e-29 133.7 196 36.2
Hma1.2p1_1340F.1_g276770 Hydrangea macrophylla HOM05D000246 ORTHO05D008363 1.9e-29 133.7 179 40.8
PSO063G0842 Papaver somniferum HOM05D000246 ORTHO05D008363 1.9e-29 133.7 195 37.9
PSO782G1321 Papaver somniferum HOM05D000246 ORTHO05D008363 1.9e-29 133.7 195 37.9
CSS0031830 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D008363 3.2e-29 132.9 187 36.4
Hund25439 Selenicereus undatus HOM05D000246 ORTHO05D008363 3.2e-29 132.9 205 36.1
A07p11560 Brassica napus HOM05D000246 ORTHO05D008363 5.4e-29 132.1 193 36.3
BraA07t28944Z Brassica rapa HOM05D000246 ORTHO05D008363 5.4e-29 132.1 193 36.3
Actinidia25762 Actinidia chinensis HOM05D000246 ORTHO05D008363 7.1e-29 131.7 210 36.2
BcaC06g35322 Brassica carinata HOM05D000246 ORTHO05D008363 7.1e-29 131.7 193 36.3
C07p17440 Brassica napus HOM05D000246 ORTHO05D008363 7.1e-29 131.7 193 36.3
BolC7t42249H Brassica oleracea HOM05D000246 ORTHO05D008363 7.1e-29 131.7 193 36.3
Lsat_1_v5_gn_4_2880 Lactuca sativa HOM05D000246 ORTHO05D008363 9.2e-29 131.3 204 31.9
Solyc05g014690.3 Solanum lycopersicum HOM05D000246 ORTHO05D008363 9.2e-29 131.3 200 35.0
Sopen05g009850 Solanum pennellii HOM05D000246 ORTHO05D008363 9.2e-29 131.3 200 35.0
MD16G1111900 Malus domestica HOM05D000246 ORTHO05D008363 1.2e-28 131.0 219 33.8
QL03p054717 Quercus lobata HOM05D000246 ORTHO05D008363 1.2e-28 131.0 205 35.1
FAN12G3886 Fragaria x ananassa HOM05D000246 ORTHO05D008363 1.6e-28 130.6 184 37.5
FAN17G1269 Fragaria x ananassa HOM05D000246 ORTHO05D008363 1.6e-28 130.6 193 36.8
FvH4_4g24310 Fragaria vesca HOM05D000246 ORTHO05D008363 2.1e-28 130.2 184 37.5
Atru.chr11.2248 Acer truncatum HOM05D000246 ORTHO05D008363 2.7e-28 129.8 182 36.8
Atru.chr11.2263 Acer truncatum HOM05D000246 ORTHO05D008363 2.7e-28 129.8 182 36.8
FAN07G2267 Fragaria x ananassa HOM05D000246 ORTHO05D008363 4.6e-28 129.0 193 36.3
CAN.G524.28 Capsicum annuum HOM05D000246 ORTHO05D008363 7.8e-28 128.3 196 35.2
RcHm_v2.0_Chr4g0431111 Rosa chinensis HOM05D000246 ORTHO05D008363 7.8e-28 128.3 188 37.2
ATR0824G260 Amborella trichopoda HOM05D000246 ORTHO05D008363 1.0e-27 127.9 209 34.4
HanXRQChr12g0355541 Helianthus annuus HOM05D000246 ORTHO05D008363 1.0e-27 127.9 216 31.5
HanXRQChr12g0385911 Helianthus annuus HOM05D000246 ORTHO05D008363 1.0e-27 127.9 202 32.7
Lalb_Chr12g0206361 Lupinus albus HOM05D000246 ORTHO05D008363 1.0e-27 127.9 197 35.5
Lj6C822G18 Lonicera japonica HOM05D000246 ORTHO05D008363 1.3e-27 127.5 196 33.7
PGR102G1013 Punica granatum HOM05D000246 ORTHO05D008363 2.3e-27 126.7 177 36.2
Sc04g0005060 Simmondsia chinensis HOM05D000246 ORTHO05D008363 2.3e-27 126.7 184 35.9
EL10Ac6g13439 Beta vulgaris HOM05D000246 ORTHO05D008363 5.1e-27 125.6 205 33.7
FAN22G1025 Fragaria x ananassa HOM05D000246 ORTHO05D008363 5.1e-27 125.6 184 36.4
Prupe.1G233100 Prunus persica HOM05D000246 ORTHO05D008363 8.7e-27 124.8 196 34.7
Ciclev10030662m.g Citrus clementina HOM05D000246 ORTHO05D008363 1.1e-26 124.4 182 34.1
HPP92_008108 Vanilla planifolia HOM05D000246 ORTHO05D008363 1.1e-26 124.4 156 35.3
HPP92_008127 Vanilla planifolia HOM05D000246 ORTHO05D008363 1.1e-26 124.4 156 35.3
DCAR_031182 Daucus carota HOM05D000246 ORTHO05D008363 1.5e-26 124.0 181 33.7
Cfa009315 Carpinus fangiana HOM05D003830 ORTHO05D008363 1.9e-26 123.6 210 33.3
arahy.Tifrunner.gnm1.ann1.ZECH1J Arachis hypogaea HOM05D000246 ORTHO05D008363 3.3e-26 122.9 184 35.3
MSTRG.7982 Avicennia marina HOM05D000246 ORTHO05D008363 3.3e-26 122.9 187 33.2
Oeu041679.1 Olea europaea HOM05D000246 ORTHO05D008363 3.3e-26 122.9 187 31.6
Potri.010G056500 Populus trichocarpa HOM05D000246 ORTHO05D008363 3.3e-26 122.9 200 33.5
Zm00001eb425250 Zea mays HOM05D000246 ORTHO05D008363 3.3e-26 122.9 199 36.2
Manes.13G015900 Manihot esculenta HOM05D000246 ORTHO05D008363 4.3e-26 122.5 212 34.4
VMungo0251G2810 Vigna mungo HOM05D000246 ORTHO05D008363 4.3e-26 122.5 182 34.1
CiPaw.05G115000 Carya illinoinensis HOM05D000246 ORTHO05D008363 7.3e-26 121.7 218 32.6
TWI36G1065 Tripterygium wilfordii HOM05D000246 ORTHO05D008363 9.6e-26 121.3 216 31.5
Lj4g0022914 Lotus japonicus HOM05D000246 ORTHO05D008363 1.6e-25 120.6 182 34.1
Cc11_g16610 Coffea canephora HOM05D000246 ORTHO05D008363 2.1e-25 120.2 187 33.7
arahy.Tifrunner.gnm1.ann1.L7S9V2 Arachis hypogaea HOM05D000246 ORTHO05D008363 2.8e-25 119.8 184 34.2
Dinv14802 Davidia involucrata HOM05D000246 ORTHO05D008363 2.8e-25 119.8 196 31.1
Phvul.002G176000 Phaseolus vulgaris HOM05D000246 ORTHO05D008363 2.8e-25 119.8 182 34.1
Ca_18064_v3 Cicer arietinum L. HOM05D000246 ORTHO05D008363 3.6e-25 119.4 182 33.5
Glyma.08G102300 Glycine max HOM05D000246 ORTHO05D008363 3.6e-25 119.4 182 34.1
Migut.K00698 Erythranthe guttata HOM05D000246 ORTHO05D008363 4.8e-25 119.0 160 35.0
CsaV3_5G030500 Cucumis sativus L. HOM05D000246 ORTHO05D008363 8.1e-25 118.2 153 36.6
Sed0026556 Sechium edule HOM05D000246 ORTHO05D008363 1.1e-24 117.9 157 35.7
Psat7g079560 Pisum sativum HOM05D000246 ORTHO05D008363 1.4e-24 117.5 188 33.0
ECA234G2532 Erigeron canadensis HOM05D000246 ORTHO05D008363 2.4e-24 116.7 193 30.6
Sabra10G0048600 Salix brachista HOM05D000246 ORTHO05D008363 4.0e-24 115.9 193 33.7
ClCG11G013890 Citrullus lanatus HOM05D000246 ORTHO05D008363 9.0e-24 114.8 153 34.6
MELO3C011889.2 Cucumis melo HOM05D000246 ORTHO05D008363 9.0e-24 114.8 153 35.3
SGA_v2.0_scaffold100G29590 Striga asiatica HOM05D000246 ORTHO05D008363 1.2e-23 114.4 186 32.8
TPR.G17092 Trifolium pratense HOM05D000246 ORTHO05D008363 1.2e-23 114.4 182 33.0
AUR62024158 Chenopodium quinoa HOM05D000246 ORTHO05D008363 2.0e-23 113.6 188 31.9
Medtr8g080160 Medicago truncatula HOM05D000246 ORTHO05D008363 2.6e-23 113.2 179 33.0
SHI17940 Sapria himalayana HOM05D000246 ORTHO05D008363 2.6e-23 113.2 156 36.5
Haze_12369 Corylus avellana HOM05D000246 ORTHO05D008363 2.2e-22 110.2 178 32.6
vmacro16133 Vaccinium macrocarpon HOM05D000246 ORTHO05D008363 8.4e-22 108.2 151 34.4
Peaxi162Scf00128g00937 Petunia axillaris HOM05D000246 ORTHO05D008363 7.1e-21 105.1 196 31.1
Nitab4.5_0000240g0090 Nicotiana tabacum HOM05D000246 ORTHO05D008363 3.3e-18 96.3 143 35.0
COL.COLO4_23621 Corchorus olitorius HOM05D003830 ORTHO05D004446 7.3e-18 95.1 153 32.7
Nitab4.5_0011772g0040 Nicotiana tabacum HOM05D000246 ORTHO05D008363 1.3e-17 94.4 144 34.7
Ah.03g133840 Amaranthus hybridus HOM05D000246 ORTHO05D008363 1.1e-16 91.3 155 32.3
MCO05G045 Micromonas commoda HOM05D000246 ORTHO05D008363 8.4e-14 81.6 199 28.1
MBI08_g29122_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D008363 2.4e-13 80.1 98 36.7
SEGI_39158 Sequoiadendron giganteum HOM05D000246 ORTHO05D008363 4.2e-13 79.3 87 40.2
AUR62005572 Chenopodium quinoa HOM05D000246 ORTHO05D008363 2.7e-12 76.6 135 29.6
Rhsim12G0105200 Rhododendron simsii HOM05D000246 ORTHO05D008363 2.5e-10 70.1 144 30.6
Cpa.g.sc43.36 Carica papaya HOM05D000246 ORTHO05D008363 2.6e-07 60.1 82 36.6
Glyma.05G145500 Glycine max HOM05D000246 ORTHO05D008363 3.4e-07 59.7 98 31.6
unitig_22.g6411 Utricularia gibba HOM05D000246 ORTHO05D008363 4.9e-06 55.8 153 27.5


User provided reference genes

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