Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 5.8e-218 760.8 432 100.0
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 1.6e-21 108.2 174 39.1
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 4.6e-21 106.7 169 38.5
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 1.3e-20 105.1 168 38.1
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 3.0e-20 104.0 179 36.3
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 3.9e-20 103.6 179 36.9
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 3.9e-20 103.6 179 36.9
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 5.1e-20 103.2 192 36.5
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 1.5e-19 101.7 209 36.4
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 1.9e-19 101.3 168 38.7
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 3.3e-19 100.5 155 39.4
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 5.6e-19 99.8 180 38.3
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 9.6e-19 99.0 183 36.1
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 9.6e-19 99.0 180 38.3
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 1.6e-18 98.2 181 35.9
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 2.8e-18 97.4 167 37.7
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 4.7e-18 96.7 167 38.3
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 4.7e-18 96.7 174 36.2
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 6.2e-18 96.3 174 36.2
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 6.2e-18 96.3 213 31.9
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 8.1e-18 95.9 156 37.8
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 8.1e-18 95.9 169 36.1
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.1e-17 95.5 165 39.4
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.1e-17 95.5 165 39.4
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.4e-17 95.1 171 35.7
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.4e-17 95.1 183 36.1
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.8e-17 94.7 183 36.6
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 2.4e-17 94.4 185 36.2
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 2.4e-17 94.4 173 33.5
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 2.4e-17 94.4 173 38.2
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 2.4e-17 94.4 137 38.7
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 3.1e-17 94.0 178 37.1
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 3.1e-17 94.0 178 37.1
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 4.0e-17 93.6 179 36.9
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 4.0e-17 93.6 178 37.6
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 4.0e-17 93.6 164 35.4
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 5.2e-17 93.2 207 31.9
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 6.8e-17 92.8 179 35.2
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 6.8e-17 92.8 168 35.1
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 6.8e-17 92.8 179 36.3
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 1.2e-16 92.0 169 36.1
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 1.2e-16 92.0 166 35.5
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 1.2e-16 92.0 170 37.6
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 1.5e-16 91.7 168 33.9
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 1.5e-16 91.7 167 39.5
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 1.5e-16 91.7 168 36.9
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.5e-16 91.7 168 35.7
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 2.0e-16 91.3 149 35.6
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 2.0e-16 91.3 178 36.5
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 2.0e-16 91.3 171 37.4
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 2.6e-16 90.9 161 37.9
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 2.6e-16 90.9 178 36.0
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 2.6e-16 90.9 179 36.3
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 3.4e-16 90.5 173 36.4
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.4e-16 90.5 178 36.0
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 4.4e-16 90.1 175 34.9
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 4.4e-16 90.1 170 32.9
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 4.4e-16 90.1 180 35.6
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 7.6e-16 89.4 142 41.5
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 7.6e-16 89.4 177 35.0
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 9.9e-16 89.0 179 34.1
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 9.9e-16 89.0 178 35.4
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 9.9e-16 89.0 197 34.5
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 9.9e-16 89.0 174 35.6
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 1.3e-15 88.6 169 33.1
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 1.7e-15 88.2 163 34.4
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.2e-15 87.8 170 35.9
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 2.9e-15 87.4 207 30.4
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 4.9e-15 86.7 173 34.7
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 4.9e-15 86.7 173 34.1
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 6.4e-15 86.3 168 35.1
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 8.4e-15 85.9 174 36.2
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 8.4e-15 85.9 174 34.5
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 8.4e-15 85.9 178 36.0
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 1.4e-14 85.1 179 33.0
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 1.9e-14 84.7 173 35.8
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 3.2e-14 84.0 145 40.7
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 3.2e-14 84.0 145 40.7
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 4.2e-14 83.6 163 35.6
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 5.4e-14 83.2 168 35.1
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 5.4e-14 83.2 173 36.4
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 7.1e-14 82.8 176 34.1
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 9.3e-14 82.4 142 35.9
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 1.2e-13 82.0 174 32.8
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 1.2e-13 82.0 183 32.2
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 1.6e-13 81.6 181 34.3
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 4.6e-13 80.1 238 32.4
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 8.7e-12 75.9 180 32.2
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 8.7e-12 75.9 211 31.3
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 8.7e-12 75.9 150 35.3
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 2.5e-11 74.3 159 34.6
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 3.3e-11 73.9 196 30.1
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 7.3e-11 72.8 206 29.1
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 7.3e-11 72.8 186 30.6
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 9.6e-11 72.4 149 34.9
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 6.2e-10 69.7 118 34.7
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 5.3e-09 66.6 175 29.7
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 2.0e-08 64.7 220 29.1
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 3.4e-08 63.9 167 31.7
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 7.6e-08 62.8 115 37.4
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 9.9e-08 62.4 156 32.7
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 3.2e-06 57.4 257 28.8


User provided reference genes

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