Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g31897 Chara braunii HOM05D001093 ORTHO05D000743 0.0e+00 6586.1 3920 100.0
SalBow6G2465 Salvia bowleyana HOM05D001093 ORTHO05D000743 5.4e-12 79.7 179 31.8
Peaxi162Scf00071g00201 Petunia axillaris HOM05D001093 ORTHO05D000743 1.2e-11 78.6 161 31.7
TWI60G0473 Tripterygium wilfordii HOM05D007909 ORTHO05D000743 3.5e-11 77.0 146 29.5
Lsat_1_v5_gn_8_117260 Lactuca sativa HOM05D001093 ORTHO05D000743 1.3e-10 75.1 148 33.8
TWI60G1066 Tripterygium wilfordii HOM05D001093 ORTHO05D000743 1.8e-10 74.7 145 30.3
DCAR_014418 Daucus carota HOM05D001093 ORTHO05D000743 2.3e-10 74.3 141 31.2
CSS0045835 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 3.0e-10 73.9 138 31.2
AT1G43770 Arabidopsis thaliana HOM05D001093 ORTHO05D000743 3.9e-10 73.6 143 32.9
Cpa.g.sc49.46 Carica papaya HOM05D001093 ORTHO05D000743 3.9e-10 73.6 140 31.4
Medtr6g044600 Medicago truncatula HOM05D001093 ORTHO05D000743 3.9e-10 73.6 140 28.6
Peaxi162Scf00842g00328 Petunia axillaris HOM05D001093 ORTHO05D000743 5.1e-10 73.2 267 26.2
Solyc04g009400.4 Solanum lycopersicum HOM05D001093 ORTHO05D000743 5.1e-10 73.2 152 29.6
Prupe.8G022600 Prunus persica HOM05D001093 ORTHO05D000743 6.7e-10 72.8 146 29.5
arahy.Tifrunner.gnm1.ann1.U9V461 Arachis hypogaea HOM05D001093 ORTHO05D000743 8.7e-10 72.4 147 30.6
Ciclev10000763m.g Citrus clementina HOM05D001093 ORTHO05D000743 8.7e-10 72.4 140 32.9
CsaV3_7G024810 Cucumis sativus L. HOM05D001093 ORTHO05D000743 8.7e-10 72.4 146 31.5
HanXRQChr09g0258361 Helianthus annuus HOM05D001093 ORTHO05D000743 8.7e-10 72.4 153 32.0
Sabra05G0144700 Salix brachista HOM05D001093 ORTHO05D000743 8.7e-10 72.4 137 29.2
Glyma.06G230000 Glycine max HOM05D001093 ORTHO05D000743 1.1e-09 72.0 139 32.4
Lj2g0008242 Lotus japonicus HOM05D001093 ORTHO05D000743 1.1e-09 72.0 195 27.7
TWI60G1406 Tripterygium wilfordii HOM05D001093 ORTHO05D000743 1.1e-09 72.0 137 32.1
AL1G51860 Arabidopsis lyrata HOM05D001093 ORTHO05D000743 1.5e-09 71.6 143 31.5
MD10G1018200 Malus domestica HOM05D001093 ORTHO05D000743 1.5e-09 71.6 138 29.7
Solyc04g050720.4 Solanum lycopersicum HOM05D001093 ORTHO05D000743 1.5e-09 71.6 177 29.4
Sopen04g021630 Solanum pennellii HOM05D001093 ORTHO05D000743 1.5e-09 71.6 177 29.4
Glyma.09G125400 Glycine max HOM05D001093 ORTHO05D000743 1.9e-09 71.2 139 32.4
Lj2g0007742 Lotus japonicus HOM05D001093 ORTHO05D000743 1.9e-09 71.2 132 31.8
Nn1g06166 Nelumbo nucifera HOM05D001093 ORTHO05D000743 1.9e-09 71.2 150 30.0
Aqoxy3G03628 Aquilegia oxysepala HOM05D001093 ORTHO05D000743 2.5e-09 70.9 142 31.7
MELO3C024101.2 Cucumis melo HOM05D001093 ORTHO05D000743 2.5e-09 70.9 137 35.0
Manes.18G089400 Manihot esculenta HOM05D001093 ORTHO05D000743 2.5e-09 70.9 170 29.4
Phvul.004G100400 Phaseolus vulgaris HOM05D001093 ORTHO05D000743 2.5e-09 70.9 162 31.5
Sabra05G0130700 Salix brachista HOM05D001093 ORTHO05D000743 2.5e-09 70.9 138 30.4
Sabra07G0090300 Salix brachista HOM05D001093 ORTHO05D000743 2.5e-09 70.9 138 27.5
Sed0006161 Sechium edule HOM05D001093 ORTHO05D000743 3.3e-09 70.5 146 30.8
Actinidia01147 Actinidia chinensis HOM05D001093 ORTHO05D000743 4.3e-09 70.1 140 33.6
Aa31LG6G9690 Aethionema arabicum HOM05D001093 ORTHO05D000743 4.3e-09 70.1 165 30.3
CSS0013878 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 4.3e-09 70.1 251 27.5
ClCG09G009890 Citrullus lanatus HOM05D001093 ORTHO05D000743 4.3e-09 70.1 138 31.9
Dinv11327 Davidia involucrata HOM05D001093 ORTHO05D000743 4.3e-09 70.1 153 30.1
Lj5g0005381 Lotus japonicus HOM05D001093 ORTHO05D000743 4.3e-09 70.1 139 30.2
Nitab4.5_0002121g0010 Nicotiana tabacum HOM05D001093 ORTHO05D000743 4.3e-09 70.1 161 27.3
Cfa019304 Carpinus fangiana HOM05D001093 ORTHO05D000743 5.6e-09 69.7 139 29.5
CAN.G4.14 Capsicum annuum HOM05D001093 ORTHO05D000743 7.4e-09 69.3 176 27.8
Cpa.g.sc49.44 Carica papaya HOM05D001093 ORTHO05D000743 7.4e-09 69.3 140 29.3
CDE06G0878 Ceratophyllum demersum HOM05D001093 ORTHO05D000743 7.4e-09 69.3 134 31.3
Nitab4.5_0004813g0020 Nicotiana tabacum HOM05D001093 ORTHO05D000743 7.4e-09 69.3 176 27.3
PGSC0003DMG400028673 Solanum tuberosum HOM05D001093 ORTHO05D000743 7.4e-09 69.3 204 27.5
Glyma.10G227100 Glycine max HOM05D001093 ORTHO05D000743 9.6e-09 68.9 137 27.7
Sopen04g004530 Solanum pennellii HOM05D001093 ORTHO05D000743 9.6e-09 68.9 201 24.9
arahy.Tifrunner.gnm1.ann1.7R0RVH Arachis hypogaea HOM05D001093 ORTHO05D000743 1.3e-08 68.6 145 31.0
Dinv05707 Davidia involucrata HOM05D001093 ORTHO05D000743 1.3e-08 68.6 162 29.0
MBI19_g05297_MAGBIO Magnolia biondii HOM05D001093 ORTHO05D000743 1.3e-08 68.6 144 31.9
Potri.005G173200 Populus trichocarpa HOM05D001093 ORTHO05D000743 1.3e-08 68.6 138 28.3
arahy.Tifrunner.gnm1.ann1.43LRWI Arachis hypogaea HOM05D001093 ORTHO05D000743 1.6e-08 68.2 188 28.7
MD05G1018500 Malus domestica HOM05D001093 ORTHO05D000743 1.6e-08 68.2 138 29.0
RcHm_v2.0_Chr6g0276691 Rosa chinensis HOM05D001093 ORTHO05D000743 1.6e-08 68.2 145 29.7
CDE08G1401 Ceratophyllum demersum HOM05D001093 ORTHO05D000743 2.8e-08 67.4 157 27.4
Migut.C01022 Erythranthe guttata HOM05D001093 ORTHO05D000743 2.8e-08 67.4 132 32.6
Glyma.20G165200 Glycine max HOM05D001093 ORTHO05D000743 2.8e-08 67.4 138 26.8
TPR.G39589 Trifolium pratense HOM05D001093 ORTHO05D000743 2.8e-08 67.4 139 28.1
AUR62003609 Chenopodium quinoa HOM05D001093 ORTHO05D000743 3.7e-08 67.0 140 27.9
ECA236G3128 Erigeron canadensis HOM05D001093 ORTHO05D000743 3.7e-08 67.0 145 29.7
Psat0s667g0240 Pisum sativum HOM05D001093 ORTHO05D000743 3.7e-08 67.0 128 28.9
Atru.chr5.93 Acer truncatum HOM05D001093 ORTHO05D000743 4.8e-08 66.6 141 28.4
BolC1t05866H Brassica oleracea HOM05D001093 ORTHO05D000743 4.8e-08 66.6 99 39.4
Migut.H00747 Erythranthe guttata HOM05D001093 ORTHO05D000743 4.8e-08 66.6 145 29.7
Peaxi162Scf01184g00141 Petunia axillaris HOM05D001093 ORTHO05D000743 4.8e-08 66.6 137 29.2
arahy.Tifrunner.gnm1.ann1.ER6SHV Arachis hypogaea HOM05D008195 ORTHO05D000743 6.2e-08 66.2 146 30.1
Dinv25213 Davidia involucrata HOM05D001093 ORTHO05D000743 6.2e-08 66.2 70 50.0
Medtr6g034375 Medicago truncatula HOM05D001093 ORTHO05D000743 6.2e-08 66.2 139 29.5
Psat6g194360 Pisum sativum HOM05D001093 ORTHO05D000743 6.2e-08 66.2 141 30.5
AUR62017920 Chenopodium quinoa HOM05D001093 ORTHO05D000743 8.1e-08 65.9 126 28.6
Lalb_Chr06g0161481 Lupinus albus HOM05D001093 ORTHO05D000743 8.1e-08 65.9 156 29.5
Nn5g28671 Nelumbo nucifera HOM05D001093 ORTHO05D000743 8.1e-08 65.9 271 24.0
Solyc04g070990.4 Solanum lycopersicum HOM05D001093 ORTHO05D000743 8.1e-08 65.9 153 28.8
Sopen04g026940 Solanum pennellii HOM05D001093 ORTHO05D000743 8.1e-08 65.9 153 28.8
Potri.005G189400 Populus trichocarpa HOM05D001093 ORTHO05D000743 1.1e-07 65.5 194 26.8
Prupe.5G038800 Prunus persica HOM05D001093 ORTHO05D000743 1.1e-07 65.5 140 31.4
FAN11G1971 Fragaria x ananassa HOM05D001093 ORTHO05D000743 1.4e-07 65.1 122 31.1
Lsat_1_v5_gn_3_107161 Lactuca sativa HOM05D001093 ORTHO05D000743 1.4e-07 65.1 178 29.8
Dinv41107 Davidia involucrata HOM05D001093 ORTHO05D000743 1.8e-07 64.7 143 30.8
BcaNung04315 Brassica carinata HOM05D001093 ORTHO05D000743 2.4e-07 64.3 97 38.1
Migut.C01024 Erythranthe guttata HOM05D001093 ORTHO05D000743 2.4e-07 64.3 120 33.3
Lj2g0009264 Lotus japonicus HOM05D001093 ORTHO05D000743 2.4e-07 64.3 103 35.9
Eucgr.D01851 Eucalyptus grandis HOM05D000329 ORTHO05D000833 3.1e-07 63.9 66 42.4
Glyma.11G109800 Glycine max HOM05D001093 ORTHO05D000743 3.1e-07 63.9 180 28.3
Medtr3g025330 Medicago truncatula HOM05D001093 ORTHO05D010605 3.1e-07 63.9 223 26.9
Phvul.009G191900 Phaseolus vulgaris HOM05D007909 ORTHO05D000743 3.1e-07 63.9 166 29.5
SEGI_01537 Sequoiadendron giganteum HOM05D001093 ORTHO05D000743 3.1e-07 63.9 231 26.0
Ca_19334_v3 Cicer arietinum L. HOM05D001093 ORTHO05D000743 4.0e-07 63.5 151 27.8
COL.COLO4_34455 Corchorus olitorius HOM05D000329 ORTHO05D000833 4.0e-07 63.5 88 39.8
TPR.G37844 Trifolium pratense HOM05D001093 ORTHO05D000743 4.0e-07 63.5 139 25.9
Atru.chr13.2236 Acer truncatum HOM05D001093 ORTHO05D000743 5.3e-07 63.2 98 34.7
AUR62008519 Chenopodium quinoa HOM05D001093 ORTHO05D000743 5.3e-07 63.2 247 23.1
Dinv17244 Davidia involucrata HOM05D001093 ORTHO05D000743 5.3e-07 63.2 140 30.0
PGR042G0583 Punica granatum HOM05D001093 ORTHO05D000743 5.3e-07 63.2 140 27.9
Thecc.03G277900 Theobroma cacao HOM05D000329 ORTHO05D000833 5.3e-07 63.2 62 43.5
CiPaw.05G213100 Carya illinoinensis HOM05D001093 ORTHO05D000743 6.9e-07 62.8 84 36.9
ECA232G2941 Erigeron canadensis HOM05D001093 ORTHO05D000743 6.9e-07 62.8 164 31.1
Cc08_g14660 Coffea canephora HOM05D000329 ORTHO05D000833 9.0e-07 62.4 66 43.9
Cc10_g14180 Coffea canephora HOM05D001093 ORTHO05D000743 9.0e-07 62.4 177 29.4
Duzib068G0085 Durio zibethinus HOM05D000329 ORTHO05D000833 9.0e-07 62.4 62 43.5
Duzib106G0988 Durio zibethinus HOM05D001093 ORTHO05D000743 9.0e-07 62.4 115 34.8
Migut.E01096 Erythranthe guttata HOM05D000329 ORTHO05D000833 9.0e-07 62.4 80 36.2
Potri.003G126600 Populus trichocarpa HOM05D000329 ORTHO05D000833 9.0e-07 62.4 65 41.5
Sabra03G0089600 Salix brachista HOM05D000329 ORTHO05D000833 9.0e-07 62.4 65 41.5
Actinidia02012 Actinidia chinensis HOM05D000329 ORTHO05D000833 1.2e-06 62.0 80 38.8
ATR0064G095 Amborella trichopoda HOM05D001093 ORTHO05D000743 1.2e-06 62.0 145 24.8
Aqoxy6G00388 Aquilegia oxysepala HOM05D001093 ORTHO05D000743 1.2e-06 62.0 167 29.9
Gohir.A08G182350 Gossypium hirsutum HOM05D000329 ORTHO05D000833 1.2e-06 62.0 62 41.9
Gorai.004G211700 Gossypium raimondii HOM05D000329 ORTHO05D000833 1.2e-06 62.0 62 41.9
Lsat_1_v5_gn_3_106880 Lactuca sativa HOM05D001093 ORTHO05D000743 1.2e-06 62.0 188 27.1
Lsat_1_v5_gn_9_47901 Lactuca sativa HOM05D001093 ORTHO05D000743 1.2e-06 62.0 104 34.6
Psat1g092320 Pisum sativum HOM05D001093 ORTHO05D000743 1.2e-06 62.0 139 27.3
QL02p024630 Quercus lobata HOM05D001093 ORTHO05D000743 1.2e-06 62.0 137 27.7
Sed0028074 Sechium edule HOM05D007909 ORTHO05D000743 1.2e-06 62.0 124 29.0
C06p04250 Brassica napus HOM05D001093 ORTHO05D000743 1.5e-06 61.6 134 32.8
BolC6t35549H Brassica oleracea HOM05D001093 ORTHO05D000743 1.5e-06 61.6 134 32.8
Duzib205G0904 Durio zibethinus HOM05D007909 ORTHO05D000743 1.5e-06 61.6 133 29.3
Migut.N03229 Erythranthe guttata HOM05D001093 ORTHO05D000743 1.5e-06 61.6 117 32.5
unitig_62.g23837 Utricularia gibba HOM05D001093 ORTHO05D000743 1.5e-06 61.6 69 42.0
vmacro11324 Vaccinium macrocarpon HOM05D000329 ORTHO05D000833 1.5e-06 61.6 65 40.0
BcaC08g43143 Brassica carinata HOM05D001093 ORTHO05D000743 2.0e-06 61.2 134 32.8
Duzib116G0600 Durio zibethinus HOM05D001093 ORTHO05D000743 2.0e-06 61.2 138 31.2
Thhalv10020044m.g Eutrema salsugineum HOM05D001093 ORTHO05D000743 2.0e-06 61.2 71 45.1
FAN17G0179 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.0e-06 61.2 148 29.7
Glyma.11G043500 Glycine max HOM05D001093 ORTHO05D000743 2.0e-06 61.2 116 34.5
Gohir.D11G318200 Gossypium hirsutum HOM05D001093 ORTHO05D000743 2.0e-06 61.2 75 44.0
MBI04_g22936_MAGBIO Magnolia biondii HOM05D001093 ORTHO05D000743 2.0e-06 61.2 73 43.8
MD06G1081900 Malus domestica HOM05D000329 ORTHO05D000833 2.0e-06 61.2 93 34.4
Nn1g01495 Nelumbo nucifera HOM05D000329 ORTHO05D000833 2.0e-06 61.2 80 38.8
PGR031G1761 Punica granatum HOM05D001093 ORTHO05D000743 2.0e-06 61.2 82 39.0
Rhsim02G0228800 Rhododendron simsii HOM05D000329 ORTHO05D000833 2.0e-06 61.2 65 40.0
TPR.G18690 Trifolium pratense HOM05D001093 ORTHO05D000743 2.0e-06 61.2 182 26.4
Lj2P191T46 Lonicera japonica HOM05D000329 ORTHO05D000833 2.6e-06 60.8 66 40.9
MD14G1103700 Malus domestica HOM05D000329 ORTHO05D000833 2.6e-06 60.8 69 39.1
Thecc.03G228500 Theobroma cacao HOM05D001093 ORTHO05D000743 2.6e-06 60.8 73 43.8
MSTRG.13841 Avicennia marina HOM05D000329 ORTHO05D000833 3.4e-06 60.5 80 36.2
BraA06t23590Z Brassica rapa HOM05D001093 ORTHO05D000743 3.4e-06 60.5 140 31.4
Carub.0001s3475 Capsella rubella HOM05D001093 ORTHO05D000743 3.4e-06 60.5 143 30.8
Duzib205G0279 Durio zibethinus HOM05D001093 ORTHO05D000743 3.4e-06 60.5 132 30.3
Eucgr.A02991 Eucalyptus grandis HOM05D001093 ORTHO05D000743 3.4e-06 60.5 69 42.0
FvH4_4g13540 Fragaria vesca HOM05D007909 ORTHO05D000743 3.4e-06 60.5 148 29.7
FAN27G2937 Fragaria x ananassa HOM05D001093 ORTHO05D000743 3.4e-06 60.5 138 28.3
Glyma.10G227200 Glycine max HOM05D001093 ORTHO05D000743 3.4e-06 60.5 138 28.3
Manes.14G085201 Manihot esculenta HOM05D001093 ORTHO05D000743 3.4e-06 60.5 152 27.0
TWI81G0989 Tripterygium wilfordii HOM05D000329 ORTHO05D000833 3.4e-06 60.5 62 41.9
Cfa019324 Carpinus fangiana HOM05D007909 ORTHO05D000743 4.5e-06 60.1 125 28.0
CDE06G0038 Ceratophyllum demersum HOM05D000329 ORTHO05D000833 4.5e-06 60.1 80 38.8
Mapoly0047s0113 Marchantia polymorpha HOM05D001093 ORTHO05D000743 4.5e-06 60.1 396 25.0
Medtr6g052260 Medicago truncatula HOM05D001093 ORTHO05D000743 4.5e-06 60.1 138 26.8
Nitab4.5_0000504g0100 Nicotiana tabacum HOM05D001093 ORTHO05D000743 4.5e-06 60.1 188 27.1
Nitab4.5_0003441g0110 Nicotiana tabacum HOM05D000329 ORTHO05D000833 4.5e-06 60.1 57 42.1
Nitab4.5_0010612g0010 Nicotiana tabacum HOM05D000329 ORTHO05D000833 4.5e-06 60.1 57 42.1
Potri.014G040100 Populus trichocarpa HOM05D007909 ORTHO05D000743 4.5e-06 60.1 149 28.2
PGR031G0355 Punica granatum HOM05D000329 ORTHO05D000833 4.5e-06 60.1 62 41.9
A06p03830 Brassica napus HOM05D001093 ORTHO05D000743 5.8e-06 59.7 140 31.4
BraA01t04610Z Brassica rapa HOM05D001093 ORTHO05D000743 5.8e-06 59.7 97 37.1
CSS0031193 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D000833 5.8e-06 59.7 62 41.9
CARHR076920 Cardamine hirsuta HOM05D001093 ORTHO05D000743 5.8e-06 59.7 100 38.0
Haze_07687 Corylus avellana HOM05D007909 ORTHO05D000743 5.8e-06 59.7 234 25.6
Nn1g00516 Nelumbo nucifera HOM05D001093 ORTHO05D000743 5.8e-06 59.7 76 40.8
Sabra03G0060600 Salix brachista HOM05D001093 ORTHO05D000743 5.8e-06 59.7 67 46.3
Aqoxy5G04007 Aquilegia oxysepala HOM05D000329 ORTHO05D000833 7.6e-06 59.3 62 40.3
EL10Ac5g13077 Beta vulgaris HOM05D000329 ORTHO05D000833 7.6e-06 59.3 82 36.6
CSS0022126 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 7.6e-06 59.3 78 43.6
CiPaw.12G093800 Carya illinoinensis HOM05D000329 ORTHO05D000833 7.6e-06 59.3 91 36.3
Duzib084G1408 Durio zibethinus HOM05D001093 ORTHO05D000743 7.6e-06 59.3 229 29.3
FvH4_3g26810 Fragaria vesca HOM05D001093 ORTHO05D000743 7.6e-06 59.3 145 28.3
Lalb_Chr09g0321021 Lupinus albus HOM05D000329 ORTHO05D000833 7.6e-06 59.3 89 37.1
Nitab4.5_0004819g0010 Nicotiana tabacum HOM05D001093 ORTHO05D000743 7.6e-06 59.3 199 25.6
Potri.003G091000 Populus trichocarpa HOM05D001093 ORTHO05D000743 7.6e-06 59.3 67 46.3
QL12p033243 Quercus lobata HOM05D000329 ORTHO05D000833 7.6e-06 59.3 57 42.1
TAR636G0974 Trochodendron aralioides HOM05D000329 ORTHO05D000833 7.6e-06 59.3 62 41.9
Atru.chr12.1956 Acer truncatum HOM05D001093 ORTHO05D000743 9.9e-06 58.9 60 50.0
CAN.G774.26 Capsicum annuum HOM05D000329 ORTHO05D000833 9.9e-06 58.9 64 39.1
CiPaw.15G019400 Carya illinoinensis HOM05D001093 ORTHO05D000743 9.9e-06 58.9 146 27.4
Ciclev10018462m.g Citrus clementina HOM05D000329 ORTHO05D000833 9.9e-06 58.9 62 40.3
MELO3C005670.2 Cucumis melo HOM05D000329 ORTHO05D000833 9.9e-06 58.9 62 41.9
Thhalv10012458m.g Eutrema salsugineum HOM05D001093 ORTHO05D000743 9.9e-06 58.9 63 46.0
Hma1.2p1_1063F.1_g253510 Hydrangea macrophylla HOM05D001093 ORTHO05D000743 9.9e-06 58.9 154 32.5
TPR.G36655 Trifolium pratense HOM05D001093 ORTHO05D000743 9.9e-06 58.9 109 29.4


User provided reference genes

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