Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 0.0e+00 4211.8 2614 100.0
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 5.1e-91 341.7 950 30.7
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 1.0e-86 327.4 948 31.0
MBI18_g00904_MAGBIO Magnolia biondii HOM05D004644 ORTHO05D005700 2.8e-44 186.4 287 38.3
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 1.0e-43 184.5 672 25.6
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 2.4e-40 173.3 711 25.7
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 4.1e-40 172.6 688 26.7
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 1.2e-39 171.0 723 25.4
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 2.0e-39 170.2 697 26.4
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 3.5e-39 169.5 665 25.4
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 7.8e-39 168.3 670 26.0
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 1.0e-38 167.9 694 26.7
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 1.3e-38 167.5 689 26.7
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 1.3e-38 167.5 643 25.8
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 1.3e-38 167.5 269 39.0
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.7e-38 167.2 274 39.1
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.7e-38 167.2 660 25.0
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.9e-38 166.4 660 25.0
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 2.9e-38 166.4 672 26.3
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 3.9e-38 166.0 691 25.2
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 3.9e-38 166.0 708 25.0
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 5.0e-38 165.6 660 25.3
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 1.6e-36 160.6 737 24.3
Cpa.g.sc102.18 Carica papaya HOM05D004644 ORTHO05D005700 3.6e-36 159.5 304 34.9
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 3.6e-36 159.5 685 25.4
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 3.6e-36 159.5 751 24.4
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 4.7e-36 159.1 712 25.3
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 4.7e-36 159.1 660 25.0
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 8.0e-36 158.3 670 24.9
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 2.3e-35 156.8 731 24.9
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.3e-35 156.8 267 35.2
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 3.1e-35 156.4 269 37.9
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 4.0e-35 156.0 658 23.9
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 4.0e-35 156.0 267 35.6
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 8.9e-35 154.8 709 25.0
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 1.5e-34 154.1 711 24.2
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 2.6e-34 153.3 676 25.1
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 3.4e-34 152.9 643 24.7
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 5.8e-34 152.1 645 25.7
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 5.8e-34 152.1 685 24.8
Aa31LG1G21710 Aethionema arabicum HOM05D004644 ORTHO05D005700 9.8e-34 151.4 289 37.0
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 9.8e-34 151.4 163 46.6
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 3.7e-33 149.4 671 25.0
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 4.9e-33 149.1 267 36.7
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 6.4e-33 148.7 282 36.5
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 8.3e-33 148.3 703 24.9
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 1.1e-32 147.9 669 25.7
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 1.1e-32 147.9 288 34.4
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 1.4e-32 147.5 273 34.4
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 1.4e-32 147.5 306 34.3
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 1.4e-32 147.5 272 35.3
Ca_08912_v3 Cicer arietinum L. HOM05D004644 ORTHO05D005700 1.9e-32 147.1 266 35.3
Migut.J00643 Erythranthe guttata HOM05D004644 ORTHO05D005700 2.4e-32 146.7 271 36.2
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 3.2e-32 146.4 658 24.0
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 4.1e-32 146.0 267 35.6
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 5.4e-32 145.6 267 34.8
AL6G13290 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 7.0e-32 145.2 164 45.7
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 7.0e-32 145.2 682 23.5
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 9.2e-32 144.8 304 34.5
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 1.2e-31 144.4 573 24.1
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 1.6e-31 144.1 163 46.0
Cc06_g04370 Coffea canephora HOM05D004644 ORTHO05D005700 1.6e-31 144.1 284 34.2
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 2.0e-31 143.7 741 23.9
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 2.7e-31 143.3 267 35.2
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 4.6e-31 142.5 733 24.6
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 4.6e-31 142.5 285 36.1
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 6.0e-31 142.1 267 34.8
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 7.8e-31 141.7 346 32.7
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 1.3e-30 141.0 280 32.5
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 1.3e-30 141.0 329 30.7
PGSC0003DMG401003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 1.3e-30 141.0 291 33.3
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 8.6e-30 138.3 160 47.5
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 1.1e-29 137.9 706 24.6
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 1.1e-29 137.9 160 46.9
PSO801G0701 Papaver somniferum HOM05D004644 ORTHO05D005700 1.1e-29 137.9 279 33.7
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 1.5e-29 137.5 725 24.3
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 1.5e-29 137.5 321 32.1
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 1.9e-29 137.1 267 34.5
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 3.3e-29 136.3 321 32.4
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 4.3e-29 136.0 259 32.8
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 1.6e-28 134.0 565 25.3
SGA_v2.0_scaffold75G24833 Striga asiatica HOM05D004644 ORTHO05D005700 1.6e-28 134.0 296 31.8
Nitab4.5_0000578g0020 Nicotiana tabacum HOM05D004644 ORTHO05D005700 3.6e-28 132.9 293 32.4
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 3.6e-28 132.9 710 23.0
ATR0763G089 Amborella trichopoda HOM05D004644 ORTHO05D005700 6.2e-28 132.1 222 34.7
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 2.3e-27 130.2 270 32.6
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 6.8e-27 128.6 592 25.0
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 8.9e-27 128.3 668 22.6
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 1.2e-26 127.9 304 30.9
SEGI_40598 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.2e-26 127.9 128 51.6
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 2.0e-26 127.1 269 34.9
CDE02G0420 Ceratophyllum demersum HOM05D004644 ORTHO05D005700 2.6e-26 126.7 160 43.8
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 1.7e-25 124.0 579 23.7
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 8.3e-25 121.7 673 23.8
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 1.1e-24 121.3 254 31.1
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 5.4e-24 119.0 232 31.0
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 5.4e-24 119.0 293 33.1
MD01G1102300 Malus domestica HOM05D004644 ORTHO05D005700 9.2e-24 118.2 226 31.0
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 3.5e-23 116.3 293 32.8
MCO15G141 Micromonas commoda HOM05D004644 ORTHO05D005700 7.3e-21 108.6 560 26.1
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 4.0e-19 102.8 163 39.3
CSS0030902 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 5.8e-18 99.0 178 32.6
arahy.Tifrunner.gnm1.ann1.K7JVCN Arachis hypogaea HOM05D004644 ORTHO05D005700 2.9e-17 96.7 142 38.7
PGSC0003DMG402003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 2.9e-17 96.7 145 41.4
Cc06_g04380 Coffea canephora HOM05D004644 ORTHO05D005700 1.4e-16 94.4 78 53.8
Atru.chr8.1779 Acer truncatum HOM05D004644 ORTHO05D005700 1.9e-16 94.0 113 40.7
Sc02g0001560 Simmondsia chinensis HOM05D004644 ORTHO05D005700 1.9e-16 94.0 133 41.4
Cpa.g.sc102.17 Carica papaya HOM05D004644 ORTHO05D005700 9.2e-16 91.7 111 42.3
Os03g0108200 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 9.2e-16 91.7 71 47.9
CiPaw.09G171100 Carya illinoinensis HOM05D004644 ORTHO05D005700 1.6e-15 90.9 175 34.3
SEGI_16111 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.5e-15 89.7 73 52.1
SEGI_09432 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 4.6e-15 89.4 80 51.2
SEGI_20900 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 4.6e-15 89.4 80 51.2
Prupe.7G127600 Prunus persica HOM05D004644 ORTHO05D005700 1.0e-14 88.2 95 41.1
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 3.9e-14 86.3 140 34.3
Lj3C987G12 Lonicera japonica HOM05D004644 ORTHO05D005700 6.6e-14 85.5 121 38.8
Atru.chr8.1778 Acer truncatum HOM05D004644 ORTHO05D005700 8.6e-14 85.1 78 48.7
Peaxi162Scf00722g00210 Petunia axillaris HOM05D004644 ORTHO05D005700 1.1e-13 84.7 308 26.0
ECA233G2118 Erigeron canadensis HOM05D004644 ORTHO05D005700 1.9e-13 84.0 186 34.4
HanXRQChr13g0400851 Helianthus annuus HOM05D004644 ORTHO05D005700 1.9e-13 84.0 166 36.1
Sabra10G0176300 Salix brachista HOM05D004644 ORTHO05D005700 1.9e-13 84.0 74 50.0
COL.COLO4_26936 Corchorus olitorius HOM05D004644 ORTHO05D005700 3.3e-13 83.2 104 43.3
Lsat_1_v5_gn_6_24480 Lactuca sativa HOM05D004644 ORTHO05D005700 5.6e-13 82.4 104 40.4
CSS0001913 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 7.3e-13 82.0 155 30.3
ATR0763G245 Amborella trichopoda HOM05D004644 ORTHO05D005700 3.6e-12 79.7 74 50.0
HanXRQChr02g0051711 Helianthus annuus HOM05D004644 ORTHO05D005700 3.6e-12 79.7 68 48.5
Lsat_1_v5_gn_6_24500 Lactuca sativa HOM05D004644 ORTHO05D005700 8.1e-12 78.6 132 35.6
MD01G1102200 Malus domestica HOM05D004644 ORTHO05D005700 8.1e-12 78.6 137 32.8
SEGI_30494 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.4e-11 77.0 64 50.0
Glyma.19G185000 Glycine max HOM05D004644 ORTHO05D005700 3.1e-11 76.6 72 41.7
PSO801G0041 Papaver somniferum HOM05D004644 ORTHO05D005700 8.9e-11 75.1 80 42.5
Nitab4.5_0004476g0040 Nicotiana tabacum HOM05D004644 ORTHO05D005700 3.4e-10 73.2 256 27.3
SEGI_22440 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 5.8e-10 72.4 72 45.8
PSO801G0518 Papaver somniferum HOM05D004644 ORTHO05D005700 1.7e-09 70.9 68 42.6
PGR004G0361 Punica granatum HOM05D004644 ORTHO05D005700 1.7e-09 70.9 51 51.0
PSO339G3403 Papaver somniferum HOM05D004644 ORTHO05D005700 2.2e-09 70.5 74 40.5
PGR004G0952 Punica granatum HOM05D004644 ORTHO05D005700 1.9e-08 67.4 61 42.6
SEGI_17091 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 5.4e-08 65.9 60 50.0
FvH4_7g08751 Fragaria vesca HOM05D004644 ORTHO05D005700 7.1e-08 65.5 124 33.9
MD12G1109100 Malus domestica HOM05D004644 ORTHO05D005700 2.1e-07 63.9 196 30.6
SEGI_00616 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 6.0e-07 62.4 107 31.8
AT5G03750 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 1.7e-06 60.8 49 49.0
Atru.chr8.1774 Acer truncatum HOM05D004644 ORTHO05D005700 2.3e-06 60.5 45 51.1


User provided reference genes

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