Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 0.0e+00 1273.5 754 100.0
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 2.7e-61 241.1 331 39.9
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 2.2e-58 231.5 330 38.2
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 4.8e-58 230.3 330 39.7
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 2.9e-55 221.1 328 37.8
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 4.2e-54 217.2 334 37.4
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 5.7e-51 206.8 321 38.6
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 7.4e-51 206.5 315 38.4
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 4.8e-50 203.8 315 37.1
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 4.8e-50 203.8 317 38.2
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 6.3e-50 203.4 315 35.9
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 6.3e-50 203.4 315 38.4
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 8.2e-50 203.0 318 38.1
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 1.1e-49 202.6 319 37.0
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 1.1e-49 202.6 319 36.7
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.4e-49 202.2 315 36.8
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 1.8e-49 201.8 317 39.4
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.8e-49 201.8 315 37.1
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 1.8e-49 201.8 317 35.3
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 1.8e-49 201.8 317 35.3
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 2.4e-49 201.4 315 36.2
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 3.1e-49 201.1 318 37.4
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 4.1e-49 200.7 315 37.5
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 4.1e-49 200.7 317 35.3
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 4.1e-49 200.7 322 34.2
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 5.3e-49 200.3 317 39.7
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 5.3e-49 200.3 321 37.4
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 5.3e-49 200.3 320 36.6
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 6.9e-49 199.9 319 39.8
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 6.9e-49 199.9 317 39.4
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 6.9e-49 199.9 319 39.8
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 6.9e-49 199.9 319 39.8
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 6.9e-49 199.9 317 35.3
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 6.9e-49 199.9 315 35.2
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 1.2e-48 199.1 317 34.7
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 1.2e-48 199.1 315 35.9
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 1.2e-48 199.1 321 39.3
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 1.2e-48 199.1 321 36.8
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.2e-48 199.1 323 35.6
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 1.5e-48 198.7 315 35.2
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 2.0e-48 198.4 322 33.9
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 2.0e-48 198.4 317 36.3
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 2.6e-48 198.0 315 36.5
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 2.6e-48 198.0 317 36.0
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 2.6e-48 198.0 322 35.7
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 4.5e-48 197.2 316 36.7
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 4.5e-48 197.2 322 37.6
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 4.5e-48 197.2 320 35.6
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 5.9e-48 196.8 313 35.5
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 5.9e-48 196.8 316 38.6
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 5.9e-48 196.8 317 34.7
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 5.9e-48 196.8 316 37.3
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 7.7e-48 196.4 317 36.9
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 1.0e-47 196.1 309 37.2
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 1.0e-47 196.1 316 38.9
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 1.0e-47 196.1 316 38.9
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 1.0e-47 196.1 317 35.0
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.3e-47 195.7 317 35.6
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 1.3e-47 195.7 317 36.3
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 1.7e-47 195.3 309 36.6
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 1.7e-47 195.3 334 37.4
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 2.9e-47 194.5 315 37.1
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 2.9e-47 194.5 322 33.5
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 2.9e-47 194.5 318 36.2
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 2.9e-47 194.5 324 36.1
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 3.8e-47 194.1 316 34.8
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 3.8e-47 194.1 317 34.7
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 3.8e-47 194.1 317 34.7
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 5.0e-47 193.7 315 34.0
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 6.5e-47 193.4 317 35.3
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 6.5e-47 193.4 317 35.3
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 6.5e-47 193.4 317 35.3
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 6.5e-47 193.4 315 36.5
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 6.5e-47 193.4 317 35.6
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 8.5e-47 193.0 317 34.4
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 8.5e-47 193.0 319 36.4
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 1.1e-46 192.6 328 35.1
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 1.1e-46 192.6 317 35.6
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 1.4e-46 192.2 317 34.1
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.4e-46 192.2 317 35.0
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 1.9e-46 191.8 312 35.6
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 1.9e-46 191.8 312 34.6
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 2.5e-46 191.4 319 37.0
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 2.5e-46 191.4 315 35.9
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 3.2e-46 191.0 315 36.2
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 3.2e-46 191.0 316 36.7
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 3.2e-46 191.0 319 36.1
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 4.2e-46 190.7 333 36.6
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 4.2e-46 190.7 319 35.1
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 4.2e-46 190.7 315 34.9
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 9.4e-46 189.5 320 34.1
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 1.2e-45 189.1 310 36.8
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.2e-45 189.1 317 34.7
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.2e-45 189.1 317 34.7
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 1.6e-45 188.7 317 35.0
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 1.6e-45 188.7 268 39.6
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 2.1e-45 188.3 316 37.3
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 2.7e-45 188.0 315 35.6
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 3.6e-45 187.6 322 35.1
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 6.1e-45 186.8 318 34.6
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 6.1e-45 186.8 329 32.5
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 7.9e-45 186.4 317 32.8
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 1.0e-44 186.0 317 34.4
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 1.4e-44 185.7 320 33.4
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 1.8e-44 185.3 321 36.4
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 2.3e-44 184.9 315 33.0
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 2.3e-44 184.9 310 33.2
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 3.0e-44 184.5 317 33.4
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 3.0e-44 184.5 325 32.6
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 3.9e-44 184.1 321 34.3
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 2.6e-43 181.4 273 37.7
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 2.6e-43 181.4 317 33.1
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 3.3e-43 181.0 320 35.9
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 9.7e-43 179.5 322 31.1
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 1.3e-42 179.1 277 37.9
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 3.7e-42 177.6 306 35.3
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 3.7e-42 177.6 312 31.7
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 3.7e-42 177.6 338 32.8
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 8.2e-42 176.4 308 33.4
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 1.1e-41 176.0 315 33.3
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 7.0e-41 173.3 308 36.0
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 7.0e-41 173.3 320 35.6
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 1.2e-40 172.6 306 35.3
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 2.6e-40 171.4 312 33.0
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 2.6e-40 171.4 287 35.2
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 5.9e-40 170.2 314 33.1
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 5.9e-40 170.2 317 33.1
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 1.0e-39 169.5 316 31.0
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 1.7e-39 168.7 315 31.1
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 5.0e-39 167.2 315 30.8
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 5.0e-39 167.2 315 31.7
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 1.9e-38 165.2 322 33.5
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 1.9e-38 165.2 270 36.3
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 3.2e-38 164.5 315 30.5
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 3.2e-38 164.5 306 33.0
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 3.2e-38 164.5 306 32.7
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 4.2e-38 164.1 320 31.9
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 4.2e-38 164.1 306 33.0
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 5.5e-38 163.7 306 32.7
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 5.5e-38 163.7 306 32.7
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 5.5e-38 163.7 306 32.7
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 7.2e-38 163.3 305 33.1
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 7.2e-38 163.3 304 33.6
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 9.4e-38 162.9 302 32.5
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 1.2e-37 162.5 305 33.1
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 1.6e-37 162.2 270 34.8
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 2.1e-37 161.8 305 32.1
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 2.1e-37 161.8 316 32.9
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 1.0e-36 159.5 319 32.0
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 1.4e-36 159.1 310 31.6
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 1.3e-34 152.5 260 34.2
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 1.4e-33 149.1 325 29.8
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 1.8e-33 148.7 305 36.1
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 1.7e-31 142.1 324 29.3
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.2e-31 141.7 270 31.9
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 1.6e-29 135.6 234 34.6
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 8.0e-29 133.3 257 33.9
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.4e-28 132.5 314 28.3
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 2.3e-28 131.7 315 27.9
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 8.8e-28 129.8 310 28.1
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 2.2e-26 125.2 315 27.3
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 4.8e-26 124.0 103 52.4
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 8.3e-26 123.2 130 46.2
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 1.1e-22 112.8 104 44.2
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 4.2e-22 110.9 102 49.0
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 7.2e-22 110.2 102 45.1
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 4.7e-21 107.5 110 43.6
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 8.0e-21 106.7 85 52.9
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 1.0e-20 106.3 119 45.4
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 3.0e-20 104.8 103 44.7
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 2.0e-19 102.1 313 27.5
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 5.7e-19 100.5 261 28.0
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 1.7e-18 99.0 86 53.5
C01p23190 Brassica napus HOM05D003931 ORTHO05D004577 1.1e-17 96.3 56 69.6
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 1.2e-08 66.2 49 55.1
unitig_26.g9960 Utricularia gibba HOM05D003931 ORTHO05D004577 2.5e-06 58.5 84 42.9


User provided reference genes

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