Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23778 Chara braunii HOM05D000161 ORTHO05D005857 0.0e+00 1099.0 542 100.0
Pp3c15_4200 Physcomitrium patens HOM05D000161 ORTHO05D005857 6.6e-118 428.7 406 54.4
Mapoly0070s0075 Marchantia polymorpha HOM05D000161 ORTHO05D005857 4.3e-117 426.0 344 59.6
AagrBONN_evm.TU.Sc2ySwM_228.3299 Anthoceros agrestis HOM05D000161 ORTHO05D005857 1.4e-112 411.0 371 56.1
Cre02.g092600 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D005857 2.6e-90 337.0 379 46.4
PRCOL_00006910 Prasinoderma coloniale HOM05D000161 ORTHO05D005857 4.9e-89 332.8 356 50.3
MCO09G037 Micromonas commoda HOM05D000161 ORTHO05D005857 3.0e-86 323.6 398 45.7
SEGI_02394 Sequoiadendron giganteum HOM05D000161 ORTHO05D005857 2.5e-77 293.9 260 52.3
CsaV3_4G007220 Cucumis sativus L. HOM05D000161 ORTHO05D005857 1.4e-67 261.5 340 40.9
Gohir.A08G050600 Gossypium hirsutum HOM05D000161 ORTHO05D005857 5.3e-67 259.6 340 39.7
CANSAT64G1800 Cannabis sativa HOM05D000161 ORTHO05D005857 6.9e-67 259.2 340 40.9
Gorai.004G062500 Gossypium raimondii HOM05D000161 ORTHO05D005857 6.9e-67 259.2 340 40.0
Hund11764 Selenicereus undatus HOM05D000161 ORTHO05D005857 6.9e-67 259.2 359 39.6
ClCG07G011020 Citrullus lanatus HOM05D000161 ORTHO05D005857 9.1e-67 258.8 357 40.1
THA.LOC104826018 Tarenaya hassleriana HOM05D000161 ORTHO05D005857 9.1e-67 258.8 365 39.5
Lj3g0003708 Lotus japonicus HOM05D000161 ORTHO05D005857 1.5e-66 258.1 339 40.1
DCAR_024972 Daucus carota HOM05D000161 ORTHO05D005857 2.0e-66 257.7 357 40.1
RcHm_v2.0_Chr2g0153001 Rosa chinensis HOM05D000161 ORTHO05D005857 2.0e-66 257.7 342 40.6
Mapoly0039s0053 Marchantia polymorpha HOM05D000161 ORTHO05D005857 2.6e-66 257.3 339 40.1
MBI18_g38427_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D005857 3.4e-66 256.9 364 40.9
Os04g0610800 Oryza sativa ssp. japonica HOM05D000161 ORTHO05D005857 3.4e-66 256.9 347 39.5
Atru.chr8.1036 Acer truncatum HOM05D000161 ORTHO05D005857 4.5e-66 256.5 340 40.6
Duzib138G0552 Durio zibethinus HOM05D000161 ORTHO05D005857 5.9e-66 256.1 340 39.4
Gohir.D08G060400 Gossypium hirsutum HOM05D000161 ORTHO05D005857 5.9e-66 256.1 332 40.7
Nn7g38388 Nelumbo nucifera HOM05D000161 ORTHO05D005857 5.9e-66 256.1 360 39.7
Phvul.008G289900 Phaseolus vulgaris HOM05D000161 ORTHO05D005857 5.9e-66 256.1 340 40.9
Thecc.01G176100 Theobroma cacao HOM05D000161 ORTHO05D005857 5.9e-66 256.1 340 39.4
TWI60G0112 Tripterygium wilfordii HOM05D000161 ORTHO05D005857 5.9e-66 256.1 360 39.4
arahy.Tifrunner.gnm1.ann1.DVM8T3 Arachis hypogaea HOM05D000161 ORTHO05D005857 7.7e-66 255.8 400 38.8
LjContig00081g0009344 Lotus japonicus HOM05D000161 ORTHO05D005857 7.7e-66 255.8 342 40.4
Aa31LG5G2700 Aethionema arabicum HOM05D000161 ORTHO05D009031 1.0e-65 255.4 358 39.1
Ah.07g209030 Amaranthus hybridus HOM05D000161 ORTHO05D005857 1.0e-65 255.4 341 40.2
Aqoxy1G01372 Aquilegia oxysepala HOM05D000161 ORTHO05D005857 1.0e-65 255.4 340 40.3
Sp1g02440 Schrenkiella parvula HOM05D000161 ORTHO05D005857 1.0e-65 255.4 340 40.0
Zm00001eb071140 Zea mays HOM05D000161 ORTHO05D005857 1.0e-65 255.4 348 39.4
EL10Ac3g05707 Beta vulgaris HOM05D000161 ORTHO05D005857 1.3e-65 255.0 342 40.4
Eucgr.K01354 Eucalyptus grandis HOM05D000161 ORTHO05D005857 1.3e-65 255.0 340 40.6
HanXRQChr03g0090181 Helianthus annuus HOM05D000161 ORTHO05D005857 1.3e-65 255.0 347 40.3
CSS0003887 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D005857 1.7e-65 254.6 343 40.5
Glyma.14G003200 Glycine max HOM05D000161 ORTHO05D005857 1.7e-65 254.6 340 40.6
AT1G03475 Arabidopsis thaliana HOM05D000161 ORTHO05D005857 2.2e-65 254.2 359 38.7
BcaB02g06929 Brassica carinata HOM05D000161 ORTHO05D005857 2.2e-65 254.2 340 40.0
SGA_v2.0_scaffold423G51450 Striga asiatica HOM05D000161 ORTHO05D005857 2.2e-65 254.2 341 40.8
arahy.Tifrunner.gnm1.ann1.S9CZ9A Arachis hypogaea HOM05D000161 ORTHO05D005857 2.9e-65 253.8 402 38.3
ECA240G1954 Erigeron canadensis HOM05D000161 ORTHO05D005857 2.9e-65 253.8 344 40.4
Sc13g0008500 Simmondsia chinensis HOM05D000161 ORTHO05D005857 2.9e-65 253.8 361 39.1
AL1G12980 Arabidopsis lyrata HOM05D000161 ORTHO05D005857 3.8e-65 253.4 340 39.7
BraA09t42165Z Brassica rapa HOM05D000161 ORTHO05D005857 3.8e-65 253.4 400 37.5
Manes.16G000600 Manihot esculenta HOM05D000161 ORTHO05D005857 5.0e-65 253.1 340 40.3
Psat2g001760 Pisum sativum HOM05D000161 ORTHO05D005857 5.0e-65 253.1 341 40.2
A09p68290 Brassica napus HOM05D000161 ORTHO05D005857 6.5e-65 252.7 400 37.5
CARHR002850 Cardamine hirsuta HOM05D000161 ORTHO05D005857 6.5e-65 252.7 340 39.4
PSO384G2739 Papaver somniferum HOM05D000161 ORTHO05D005857 6.5e-65 252.7 343 39.9
FvH4_6g39170 Fragaria vesca HOM05D000161 ORTHO05D005857 8.5e-65 252.3 342 39.8
FAN09G1815 Fragaria x ananassa HOM05D000161 ORTHO05D005857 8.5e-65 252.3 342 39.8
FAN14G2022 Fragaria x ananassa HOM05D000161 ORTHO05D005857 8.5e-65 252.3 342 39.8
MD17G1131200 Malus domestica HOM05D000161 ORTHO05D005857 8.5e-65 252.3 345 40.3
PGR044G2307 Punica granatum HOM05D000161 ORTHO05D005857 8.5e-65 252.3 358 39.1
A10p02010 Brassica napus HOM05D000161 ORTHO05D005857 1.1e-64 251.9 365 38.6
Carub.0006s3385 Capsella rubella HOM05D000161 ORTHO05D005857 1.1e-64 251.9 340 39.1
Haze_00005 Corylus avellana HOM05D000161 ORTHO05D005857 1.1e-64 251.9 340 38.8
MD09G1144600 Malus domestica HOM05D000161 ORTHO05D005857 1.1e-64 251.9 343 40.2
QL04p064724 Quercus lobata HOM05D000161 ORTHO05D005857 1.1e-64 251.9 339 39.2
QL04p064793 Quercus lobata HOM05D000161 ORTHO05D005857 1.1e-64 251.9 339 39.2
Thhalv10007888m.g Eutrema salsugineum HOM05D000161 ORTHO05D005857 1.4e-64 251.5 360 38.1
FAN05G2261 Fragaria x ananassa HOM05D000161 ORTHO05D005857 1.4e-64 251.5 384 37.2
PSO478G0506 Papaver somniferum HOM05D000161 ORTHO05D005857 1.4e-64 251.5 358 38.8
C08p52750 Brassica napus HOM05D000161 ORTHO05D005857 1.9e-64 251.1 341 40.2
BraA10t42474Z Brassica rapa HOM05D000161 ORTHO05D005857 1.9e-64 251.1 365 38.6
CSS0041680 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D005857 1.9e-64 251.1 386 37.3
Ciclev10011903m.g Citrus clementina HOM05D000161 ORTHO05D005857 1.9e-64 251.1 360 38.6
FAN02G1171 Fragaria x ananassa HOM05D000161 ORTHO05D005857 1.9e-64 251.1 384 37.2
HPP92_026322 Vanilla planifolia HOM05D000161 ORTHO05D005857 1.9e-64 251.1 342 40.4
C08p52850 Brassica napus HOM05D000161 ORTHO05D005857 2.5e-64 250.8 341 40.2
MSTRG.16382 Avicennia marina HOM05D000161 ORTHO05D005857 3.2e-64 250.4 341 40.2
BcaC05g24526 Brassica carinata HOM05D000161 ORTHO05D005857 3.2e-64 250.4 340 39.4
C05p01960 Brassica napus HOM05D000161 ORTHO05D005857 3.2e-64 250.4 340 39.4
BolC5t28975H Brassica oleracea HOM05D000161 ORTHO05D005857 3.2e-64 250.4 340 39.4
Carub.0001s0261 Capsella rubella HOM05D000161 ORTHO05D005857 3.2e-64 250.4 340 39.4
Prupe.3G183400 Prunus persica HOM05D000161 ORTHO05D005857 4.2e-64 250.0 386 36.8
CiPaw.06G002700 Carya illinoinensis HOM05D000161 ORTHO05D005857 5.5e-64 249.6 362 39.0
BolC8t52801H Brassica oleracea HOM05D000161 ORTHO05D005857 7.2e-64 249.2 345 39.7
Nitab4.5_0000075g0030 Nicotiana tabacum HOM05D000161 ORTHO05D005857 7.2e-64 249.2 343 40.2
PSO017G6394 Papaver somniferum HOM05D000161 ORTHO05D005857 7.2e-64 249.2 343 39.4
Potri.011G023900 Populus trichocarpa HOM05D000161 ORTHO05D005857 9.4e-64 248.8 340 39.7
Ca_06491_v3 Cicer arietinum L. HOM05D000161 ORTHO05D005857 1.2e-63 248.4 413 35.8
TPR.G35901 Trifolium pratense HOM05D000161 ORTHO05D005857 1.2e-63 248.4 341 39.6
Nitab4.5_0011255g0010 Nicotiana tabacum HOM05D000161 ORTHO05D005857 1.6e-63 248.1 343 39.7
GSVIVG01015906001 Vitis vinifera HOM05D000161 ORTHO05D005857 2.1e-63 247.7 339 40.4
Hma1.2p1_0166F.1_g073470 Hydrangea macrophylla HOM05D000161 ORTHO05D005857 3.6e-63 246.9 339 39.2
Lj6A29G59 Lonicera japonica HOM05D000161 ORTHO05D005857 3.6e-63 246.9 344 40.1
Cfa016257 Carpinus fangiana HOM05D000161 ORTHO05D005857 4.6e-63 246.5 380 37.4
AL6G49730 Arabidopsis lyrata HOM05D000161 ORTHO05D005857 6.1e-63 246.1 332 39.5
Sabra11G0014900 Salix brachista HOM05D000161 ORTHO05D005857 6.1e-63 246.1 340 39.4
PGSC0003DMG400011264 Solanum tuberosum HOM05D000161 ORTHO05D005857 6.1e-63 246.1 341 39.6
Dinv05290 Davidia involucrata HOM05D000161 ORTHO05D005857 7.9e-63 245.7 341 39.9
Pp3c21_600 Physcomitrium patens HOM05D000161 ORTHO05D005857 7.9e-63 245.7 470 34.0
AagrBONN_evm.TU.Sc2ySwM_228.282 Anthoceros agrestis HOM05D000161 ORTHO05D005857 1.4e-62 245.0 345 40.6
CAN.G465.6 Capsicum annuum HOM05D000161 ORTHO05D005857 1.4e-62 245.0 341 39.3
Medtr5g098800 Medicago truncatula HOM05D000161 ORTHO05D005857 2.3e-62 244.2 392 36.0
Solyc10g005110.3 Solanum lycopersicum HOM05D000161 ORTHO05D005857 2.3e-62 244.2 341 39.3
Sopen10g001130 Solanum pennellii HOM05D000161 ORTHO05D005857 3.0e-62 243.8 341 39.3
unitig_32.g11549 Utricularia gibba HOM05D000161 ORTHO05D005857 3.9e-62 243.4 368 38.0
CDE02G0797 Ceratophyllum demersum HOM05D000161 ORTHO05D005857 5.1e-62 243.0 345 39.1
Migut.M02037 Erythranthe guttata HOM05D000161 ORTHO05D005857 5.1e-62 243.0 342 39.2
Lalb_Chr04g0247041 Lupinus albus HOM05D000161 ORTHO05D005857 5.1e-62 243.0 367 37.9
Pp3c22_5800 Physcomitrium patens HOM05D000161 ORTHO05D005857 5.1e-62 243.0 346 39.0
Peaxi162Scf00005g00134 Petunia axillaris HOM05D000161 ORTHO05D005857 6.7e-62 242.7 352 38.9
ATR0763G015 Amborella trichopoda HOM05D000161 ORTHO05D005857 8.8e-62 242.3 366 38.3
Gorai.007G172100 Gossypium raimondii HOM05D000161 ORTHO05D005857 8.8e-62 242.3 321 40.2
SalBow8G0095 Salvia bowleyana HOM05D000161 ORTHO05D005857 1.5e-61 241.5 371 38.3
AUR62021226 Chenopodium quinoa HOM05D000161 ORTHO05D005857 2.6e-61 240.7 328 39.9
MCO07G306 Micromonas commoda HOM05D000161 ORTHO05D005857 2.6e-61 240.7 340 38.5
Gohir.A07G184900 Gossypium hirsutum HOM05D000161 ORTHO05D005857 5.7e-61 239.6 340 37.6
TAR624G0726 Trochodendron aralioides HOM05D000161 ORTHO05D005857 7.4e-61 239.2 346 38.2
Cre02.g085450 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D005857 1.7e-60 238.0 343 37.9
SMO354G0013 Selaginella moellendorffii HOM05D000161 ORTHO05D005857 1.1e-59 235.3 334 38.9
Haze_26605 Corylus avellana HOM05D000161 ORTHO05D005857 1.4e-59 235.0 327 40.1
Rhsim02G0171600 Rhododendron simsii HOM05D000161 ORTHO05D005857 1.4e-59 235.0 369 36.6
Sed0024620 Sechium edule HOM05D000161 ORTHO05D005857 1.8e-59 234.6 321 39.9
PRCOL_00002331 Prasinoderma coloniale HOM05D000161 ORTHO05D005857 2.4e-59 234.2 341 38.1
BcaC07g42243 Brassica carinata HOM05D000161 ORTHO05D005857 4.1e-59 233.4 340 39.1
BcaC07g42252 Brassica carinata HOM05D000161 ORTHO05D005857 5.3e-59 233.0 319 40.1
Sp6g03240 Schrenkiella parvula HOM05D000161 ORTHO05D005857 6.9e-59 232.6 389 36.0
TAR626G1695 Trochodendron aralioides HOM05D000161 ORTHO05D005857 2.6e-58 230.7 323 38.7
vmacro11023 Vaccinium macrocarpon HOM05D000161 ORTHO05D005857 1.1e-56 225.3 368 37.0
Cfa025537 Carpinus fangiana HOM05D000161 ORTHO05D005857 2.5e-56 224.2 341 37.5
AUR62016021 Chenopodium quinoa HOM05D000161 ORTHO05D005857 4.2e-56 223.4 347 36.9
Cpa.g.sc417.1 Carica papaya HOM05D000161 ORTHO05D005857 3.6e-55 220.3 361 36.6
Lsat_1_v5_gn_3_111240 Lactuca sativa HOM05D000161 ORTHO05D005857 8.8e-54 215.7 376 35.9
MELO3C016226.2 Cucumis melo HOM05D000161 ORTHO05D005857 1.1e-53 215.3 340 37.6
BcaC07g42260 Brassica carinata HOM05D000161 ORTHO05D005857 1.3e-52 211.8 269 40.1
Cc09_g04450 Coffea canephora HOM05D000161 ORTHO05D005857 1.3e-44 185.3 210 42.4
Gorai.001G214600 Gossypium raimondii HOM05D000161 ORTHO05D005857 1.3e-44 185.3 280 35.7
Gohir.D11G161800 Gossypium hirsutum HOM05D000161 ORTHO05D005857 4.1e-43 180.3 202 44.6
Oeu008737.1 Olea europaea HOM05D000161 ORTHO05D005857 4.1e-43 180.3 462 29.2
Oeu008990.3 Olea europaea HOM05D000161 ORTHO05D005857 9.1e-43 179.1 465 29.2
Zm00001eb430670 Zea mays HOM05D000161 ORTHO05D005857 1.5e-40 171.8 209 42.1
Thhalv10029252m.g Eutrema salsugineum HOM05D000161 ORTHO05D005857 7.2e-40 169.5 243 35.8
THA.LOC104815952 Tarenaya hassleriana HOM05D000161 ORTHO05D005857 1.5e-37 161.8 220 41.8
CDE05G1536 Ceratophyllum demersum HOM05D000161 ORTHO05D005857 2.8e-36 157.5 343 31.5
Gohir.A11G154900 Gossypium hirsutum HOM05D000161 ORTHO05D005857 1.2e-34 152.1 233 36.9
CBR_g45705 Chara braunii HOM05D000161 ORTHO05D005857 8.6e-33 146.0 343 30.6
Gohir.D07G191700 Gossypium hirsutum HOM05D000161 ORTHO05D005857 1.5e-29 135.2 172 40.7
PSO339G2005 Papaver somniferum HOM05D000161 ORTHO05D005857 9.5e-24 115.9 158 38.0
AT4G03205 Arabidopsis thaliana HOM05D000161 ORTHO05D005857 2.0e-21 108.2 152 39.5
arahy.Tifrunner.gnm1.ann1.I5BL8A Arachis hypogaea HOM05D000161 ORTHO05D005857 1.3e-12 79.0 176 33.5
arahy.Tifrunner.gnm1.ann1.0Q00UB Arachis hypogaea HOM05D000235 ORTHO05D000147 1.6e-10 72.0 158 36.1
Hma1.2p1_2159F.1_g315510 Hydrangea macrophylla HOM05D000161 ORTHO05D005857 7.8e-10 69.7 109 35.8
SHI00986 Sapria himalayana HOM05D000161 ORTHO05D005857 1.3e-09 68.9 56 55.4


User provided reference genes

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