Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 0.0e+00 3114.7 1658 100.0
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 2.4e-195 687.6 1658 31.9
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 3.2e-171 607.4 1538 31.9
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 7.8e-170 602.8 1469 30.8
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 9.6e-168 595.9 1517 30.7
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 3.4e-165 587.4 1535 30.0
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 6.4e-164 583.2 1538 30.9
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 8.4e-164 582.8 1516 30.7
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 1.4e-163 582.0 1574 30.1
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 4.2e-163 580.5 1529 30.1
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 5.4e-163 580.1 1503 30.4
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 7.1e-163 579.7 1514 30.4
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 3.0e-161 574.3 1534 30.4
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 4.3e-160 570.5 1491 31.1
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 9.6e-160 569.3 1502 30.7
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 1.3e-159 568.9 1406 32.3
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 1.3e-159 568.9 1500 30.1
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 1.6e-159 568.5 1494 30.4
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 2.1e-159 568.2 1544 29.7
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 2.8e-159 567.8 1607 29.9
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 3.6e-159 567.4 1499 31.0
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 8.1e-159 566.2 1505 29.8
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 8.1e-159 566.2 1496 30.4
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 2.4e-158 564.7 1505 30.3
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 3.1e-158 564.3 1499 30.6
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 4.0e-158 563.9 1503 30.5
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 6.9e-158 563.1 1508 29.9
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 9.0e-158 562.8 1492 30.6
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 9.9e-157 559.3 1535 30.1
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 1.3e-156 558.9 1496 29.9
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 1.3e-156 558.9 1583 29.9
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 1.7e-156 558.5 1619 29.4
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 2.9e-156 557.8 1593 29.1
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 4.9e-156 557.0 1619 29.3
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 8.4e-156 556.2 1619 29.3
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 1.1e-155 555.8 1501 30.1
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 4.2e-155 553.9 1484 30.4
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 4.2e-155 553.9 1509 30.2
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 5.4e-155 553.5 1537 29.3
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 9.3e-155 552.7 1497 30.1
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 9.3e-155 552.7 1619 29.3
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 2.1e-154 551.6 1505 30.2
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 2.1e-154 551.6 1509 30.3
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 2.1e-154 551.6 1509 30.3
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 2.1e-154 551.6 1624 29.1
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 3.5e-154 550.8 1508 30.4
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 7.9e-154 549.7 1527 30.0
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 1.3e-153 548.9 1516 30.7
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 1.5e-152 545.4 1523 30.1
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 1.5e-152 545.4 1502 30.2
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 1.9e-152 545.0 1526 30.8
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 2.5e-152 544.7 1511 30.5
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 2.5e-152 544.7 1516 29.9
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 3.3e-152 544.3 1513 29.9
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 5.6e-152 543.5 1508 30.4
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 1.3e-151 542.3 1504 30.2
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 1.6e-151 542.0 1411 30.9
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 2.8e-151 541.2 1512 30.5
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 6.2e-151 540.0 1497 29.9
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 8.1e-151 539.7 1523 28.9
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 8.1e-151 539.7 1510 30.8
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 8.1e-151 539.7 1617 28.9
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 1.1e-150 539.3 1509 30.2
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 1.1e-150 539.3 1501 30.4
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 1.1e-150 539.3 1497 30.5
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 1.4e-150 538.9 1507 30.1
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 4.0e-150 537.3 1512 29.4
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 4.0e-150 537.3 1516 29.3
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 1.5e-149 535.4 1494 29.6
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 1.5e-149 535.4 1527 30.3
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 2.0e-149 535.0 1501 29.8
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 4.5e-149 533.9 1501 30.0
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 7.6e-149 533.1 1514 30.6
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 6.4e-148 530.0 1507 30.5
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 8.4e-148 529.6 1500 29.9
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 1.1e-147 529.3 1511 30.4
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 1.1e-147 529.3 1501 29.2
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 5.5e-147 526.9 1482 30.6
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 7.1e-147 526.6 1498 30.2
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 1.2e-146 525.8 1502 29.6
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 2.1e-146 525.0 1492 29.8
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 3.5e-146 524.2 1513 30.7
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 7.9e-146 523.1 1427 29.3
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 7.9e-146 523.1 1495 30.2
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 1.8e-145 521.9 1498 29.7
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 3.0e-145 521.2 1493 29.2
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 6.7e-145 520.0 1526 30.0
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 8.7e-145 519.6 1499 29.8
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 6.2e-143 513.5 1622 27.8
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 1.8e-142 511.9 1528 29.8
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 7.6e-141 506.5 1408 31.0
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 4.2e-139 500.7 1499 29.6
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 1.8e-134 485.3 1311 30.4
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 5.7e-128 463.8 1305 29.9
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 2.2e-127 461.8 1490 28.4
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 4.8e-127 460.7 1338 29.2
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 9.4e-123 446.4 1289 29.8
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 8.8e-121 439.9 1287 30.2
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 1.5e-117 429.1 911 32.9
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 1.7e-116 425.6 1490 28.0
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 1.6e-114 419.1 1582 26.3
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 2.9e-108 398.3 1444 27.2
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 2.2e-103 382.1 895 31.2
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 2.2e-103 382.1 895 31.2
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 5.0e-100 370.9 1121 28.0
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 1.2e-98 366.3 1753 27.6
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 2.8e-95 355.1 1514 25.8
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 4.0e-89 334.7 982 28.3
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 1.5e-88 332.8 1710 28.3
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 9.2e-78 297.0 1028 25.0
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 1.6e-58 233.0 430 39.1
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 1.7e-52 213.0 1528 26.0
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 9.9e-48 197.2 1327 22.5
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 1.4e-38 166.8 367 34.9
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 2.1e-34 152.9 347 30.0
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 2.5e-19 102.8 176 36.4
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 5.0e-15 88.6 234 31.6
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 5.5e-14 85.1 210 30.0
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 2.5e-11 76.3 201 30.3
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 5.3e-09 68.6 183 32.2
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 5.9e-08 65.1 181 31.5


User provided reference genes

Program Settings