Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g229 Chara braunii HOM05D005088 ORTHO05D006914 3.2e-209 731.9 469 100.0
SEGI_26999 Sequoiadendron giganteum HOM05D005088 ORTHO05D006914 6.6e-66 255.8 262 54.2
Actinidia36135 Actinidia chinensis HOM05D005088 ORTHO05D006914 3.1e-63 246.9 221 57.5
Pp3c15_21890 Physcomitrium patens HOM05D005088 ORTHO05D006914 2.6e-62 243.8 270 50.0
TAR371G0548 Trochodendron aralioides HOM05D005088 ORTHO05D006914 2.6e-62 243.8 243 52.7
TWI63G0383 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 2.2e-61 240.7 262 52.3
ATR1136G111 Amborella trichopoda HOM05D005088 ORTHO05D006914 3.8e-61 240.0 262 49.6
Nn2g12382 Nelumbo nucifera HOM05D005088 ORTHO05D006914 6.4e-61 239.2 252 50.4
GSVIVG01008659001 Vitis vinifera HOM05D005088 ORTHO05D006914 6.4e-61 239.2 265 49.8
ECA236G2300 Erigeron canadensis HOM05D005088 ORTHO05D006914 1.1e-60 238.4 253 49.4
Ciclev10015979m.g Citrus clementina HOM05D005088 ORTHO05D006914 2.4e-60 237.3 273 49.5
Sc14g0003070 Simmondsia chinensis HOM05D005088 ORTHO05D006914 3.2e-60 236.9 227 57.7
Mapoly0020s0128 Marchantia polymorpha HOM05D005088 ORTHO05D006914 5.4e-60 236.1 225 54.2
RhsimUnG0006300 Rhododendron simsii HOM05D005088 ORTHO05D006914 5.4e-60 236.1 220 55.9
Oeu013966.1 Olea europaea HOM05D005088 ORTHO05D006914 7.1e-60 235.7 222 54.1
RhsimUnG0087300 Rhododendron simsii HOM05D005088 ORTHO05D006914 9.3e-60 235.3 220 55.9
PGR142G2056 Punica granatum HOM05D005088 ORTHO05D006914 1.6e-59 234.6 259 49.4
HanXRQChr04g0122711 Helianthus annuus HOM05D005088 ORTHO05D006914 2.7e-59 233.8 256 50.0
Haze_14769 Corylus avellana HOM05D005088 ORTHO05D006914 3.5e-59 233.4 238 51.3
CsaV3_5G026950 Cucumis sativus L. HOM05D005088 ORTHO05D006914 6.0e-59 232.6 256 51.2
TWI73G1260 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 1.0e-58 231.9 262 51.1
Migut.H00031 Erythranthe guttata HOM05D005088 ORTHO05D006914 2.3e-58 230.7 231 51.5
Lsat_1_v5_gn_7_9521 Lactuca sativa HOM05D005088 ORTHO05D006914 3.0e-58 230.3 262 49.2
vmacro05886 Vaccinium macrocarpon HOM05D005088 ORTHO05D006914 6.6e-58 229.2 255 50.2
Atru.chr6.2443 Acer truncatum HOM05D005088 ORTHO05D006914 8.7e-58 228.8 227 52.9
Duzib147G1185 Durio zibethinus HOM05D005088 ORTHO05D006914 1.5e-57 228.0 261 48.7
Thhalv10006186m.g Eutrema salsugineum HOM05D005088 ORTHO05D006914 1.5e-57 228.0 256 47.3
Dinv22813 Davidia involucrata HOM05D005088 ORTHO05D006914 1.9e-57 227.6 209 54.5
Manes.15G152700 Manihot esculenta HOM05D005088 ORTHO05D006914 1.9e-57 227.6 272 47.4
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 4.3e-57 226.5 269 48.0
CARHR166630 Cardamine hirsuta HOM05D005088 ORTHO05D006914 7.3e-57 225.7 221 49.8
Sed0009164 Sechium edule HOM05D005088 ORTHO05D006914 9.6e-57 225.3 266 47.0
AT3G56510 Arabidopsis thaliana HOM05D005088 ORTHO05D006914 1.3e-56 224.9 262 46.6
Aa31LG2G11590 Aethionema arabicum HOM05D005088 ORTHO05D006914 1.6e-56 224.6 263 46.8
CANSAT64G2170 Cannabis sativa HOM05D005088 ORTHO05D006914 1.6e-56 224.6 262 48.9
EL10Ac6g15396 Beta vulgaris HOM05D005088 ORTHO05D006914 2.1e-56 224.2 219 53.4
PSO063G5784 Papaver somniferum HOM05D005088 ORTHO05D006914 2.1e-56 224.2 230 50.9
BcaC07g39962 Brassica carinata HOM05D005088 ORTHO05D006914 4.8e-56 223.0 221 49.8
BcaNung07365 Brassica carinata HOM05D005088 ORTHO05D006914 4.8e-56 223.0 221 49.8
CANSAT64G1390 Cannabis sativa HOM05D005088 ORTHO05D006914 6.2e-56 222.6 240 50.4
AL5G37860 Arabidopsis lyrata HOM05D005088 ORTHO05D006914 8.1e-56 222.2 232 48.3
MD09G1021000 Malus domestica HOM05D005088 ORTHO05D006914 1.1e-55 221.9 235 50.6
Peaxi162Scf00420g00135 Petunia axillaris HOM05D005088 ORTHO05D006914 1.1e-55 221.9 259 47.5
Carub.0005s2328 Capsella rubella HOM05D005088 ORTHO05D006914 1.8e-55 221.1 265 45.3
CiPaw.03G046700 Carya illinoinensis HOM05D005088 ORTHO05D006914 2.4e-55 220.7 277 45.8
Potri.001G341300 Populus trichocarpa HOM05D005088 ORTHO05D006914 2.4e-55 220.7 270 48.5
Sopen01g054060 Solanum pennellii HOM05D005088 ORTHO05D006914 3.1e-55 220.3 263 46.8
Phvul.004G060300 Phaseolus vulgaris HOM05D005088 ORTHO05D006914 6.9e-55 219.2 223 49.3
SalBow8G2200 Salvia bowleyana HOM05D005088 ORTHO05D006914 6.9e-55 219.2 232 49.1
Ah.15g098720 Amaranthus hybridus HOM05D005088 ORTHO05D006914 9.0e-55 218.8 250 48.8
Glyma.05G115100 Glycine max HOM05D005088 ORTHO05D006914 9.0e-55 218.8 225 49.8
MD17G1021200 Malus domestica HOM05D005088 ORTHO05D006914 9.0e-55 218.8 240 48.3
Solyc10g008130.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 1.2e-54 218.4 264 48.1
Sopen10g004000 Solanum pennellii HOM05D005088 ORTHO05D006914 1.2e-54 218.4 264 48.1
Glyma.19G052200 Glycine max HOM05D005088 ORTHO05D006914 1.5e-54 218.0 223 49.8
Cc00_g04470 Coffea canephora HOM05D005088 ORTHO05D006914 2.0e-54 217.6 194 58.8
Thecc.04G021300 Theobroma cacao HOM05D005088 ORTHO05D006914 2.0e-54 217.6 237 50.2
PSO754G0075 Papaver somniferum HOM05D005088 ORTHO05D006914 2.6e-54 217.2 245 48.6
PGSC0003DMG400021851 Solanum tuberosum HOM05D005088 ORTHO05D006914 2.6e-54 217.2 264 47.7
CDE02G1254 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 3.4e-54 216.9 237 48.9
Gohir.A07G224400 Gossypium hirsutum HOM05D005088 ORTHO05D006914 3.4e-54 216.9 220 50.9
ClCG09G019430 Citrullus lanatus HOM05D005088 ORTHO05D006914 4.5e-54 216.5 252 50.4
SalBow4G2808 Salvia bowleyana HOM05D005088 ORTHO05D006914 4.5e-54 216.5 231 49.8
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 5.8e-54 216.1 232 51.3
Nitab4.5_0006478g0030 Nicotiana tabacum HOM05D005088 ORTHO05D006914 5.8e-54 216.1 255 46.7
MELO3C021598.2 Cucumis melo HOM05D005088 ORTHO05D006914 7.6e-54 215.7 259 47.5
Hma1.2p1_0587F.1_g183900 Hydrangea macrophylla HOM05D005088 ORTHO05D006914 7.6e-54 215.7 197 55.3
Lalb_Chr06g0174471 Lupinus albus HOM05D005088 ORTHO05D006914 7.6e-54 215.7 242 47.5
Prupe.3G295300 Prunus persica HOM05D005088 ORTHO05D006914 7.6e-54 215.7 253 47.4
Lj7A602T41 Lonicera japonica HOM05D005088 ORTHO05D006914 9.9e-54 215.3 155 65.2
VMungo0464G1582 Vigna mungo HOM05D005088 ORTHO05D006914 9.9e-54 215.3 262 45.4
A09p49430 Brassica napus HOM05D005088 ORTHO05D006914 1.3e-53 214.9 217 48.8
BraA09t40396Z Brassica rapa HOM05D005088 ORTHO05D006914 1.3e-53 214.9 217 48.8
Gohir.D07G231700 Gossypium hirsutum HOM05D005088 ORTHO05D006914 1.3e-53 214.9 220 50.9
BolC8t50800H Brassica oleracea HOM05D005088 ORTHO05D006914 1.7e-53 214.5 217 48.8
THA.LOC104820717 Tarenaya hassleriana HOM05D005088 ORTHO05D006914 1.7e-53 214.5 253 46.2
PSO210G5838 Papaver somniferum HOM05D005088 ORTHO05D006914 3.8e-53 213.4 232 47.8
RcHm_v2.0_Chr2g0173471 Rosa chinensis HOM05D005088 ORTHO05D006914 4.9e-53 213.0 221 50.7
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea HOM05D005088 ORTHO05D006914 1.4e-52 211.5 222 50.5
Gorai.001G266900 Gossypium raimondii HOM05D005088 ORTHO05D006914 1.4e-52 211.5 219 50.2
Nitab4.5_0001562g0080 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.4e-52 211.5 257 46.7
Psat1g081640 Pisum sativum HOM05D005088 ORTHO05D006914 3.2e-52 210.3 233 48.5
Nitab4.5_0006683g0110 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.2e-51 208.4 254 46.5
unitig_748.g6973 Utricularia gibba HOM05D005088 ORTHO05D006914 1.6e-51 208.0 235 48.1
Cre06.g264500 Chlamydomonas reinhardtii HOM05D005088 ORTHO05D006914 2.1e-51 207.6 178 59.0
Cpa.g.sc130.68 Carica papaya HOM05D005088 ORTHO05D006914 2.7e-51 207.2 209 53.1
FvH4_6g52000 Fragaria vesca HOM05D005088 ORTHO05D006914 3.5e-51 206.8 230 48.3
Sabra16G0221300 Salix brachista HOM05D005088 ORTHO05D006914 3.5e-51 206.8 259 47.5
Nitab4.5_0001357g0120 Nicotiana tabacum HOM05D005088 ORTHO05D006914 6.0e-51 206.1 251 45.8
HPP92_010722 Vanilla planifolia HOM05D005088 ORTHO05D006914 1.3e-50 204.9 238 45.4
Aqoxy5G03675 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 1.8e-50 204.5 255 44.7
DCAR_011267 Daucus carota HOM05D005088 ORTHO05D006914 1.8e-50 204.5 253 46.2
PSO210G1672 Papaver somniferum HOM05D005088 ORTHO05D006914 1.8e-50 204.5 228 47.4
BcaNung07083 Brassica carinata HOM05D005088 ORTHO05D006914 3.0e-50 203.8 206 49.5
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea HOM05D005088 ORTHO05D006914 5.1e-50 203.0 230 48.3
Aqoxy7G00744 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 6.7e-50 202.6 255 44.3
FAN09G0922 Fragaria x ananassa HOM05D005088 ORTHO05D006914 8.7e-50 202.2 228 47.4
C08p31790 Brassica napus HOM05D005088 ORTHO05D006914 1.5e-49 201.4 241 44.0
FAN14G4588 Fragaria x ananassa HOM05D005088 ORTHO05D006914 2.5e-49 200.7 226 47.8
PGSC0003DMG400010550 Solanum tuberosum HOM05D005088 ORTHO05D006914 2.5e-49 200.7 208 50.0
FAN05G1017 Fragaria x ananassa HOM05D005088 ORTHO05D006914 9.6e-49 198.7 226 47.3
FAN02G1545 Fragaria x ananassa HOM05D005088 ORTHO05D006914 1.3e-48 198.4 228 46.9
Medtr6g021760 Medicago truncatula HOM05D005088 ORTHO05D006914 1.6e-48 198.0 161 57.8
arahy.Tifrunner.gnm1.ann1.NQR6QW Arachis hypogaea HOM05D005088 ORTHO05D006914 2.4e-47 194.1 249 45.4
Ca_04381_v3 Cicer arietinum L. HOM05D005088 ORTHO05D006914 6.9e-47 192.6 155 58.1
Os07g0662600 Oryza sativa ssp. japonica HOM05D005088 ORTHO05D006914 9.0e-47 192.2 260 44.2
Lj4g0026117 Lotus japonicus HOM05D005088 ORTHO05D006914 1.2e-46 191.8 222 45.9
QL02p073814 Quercus lobata HOM05D005088 ORTHO05D006914 1.5e-46 191.4 272 42.6
PGSC0003DMG400018652 Solanum tuberosum HOM05D005088 ORTHO05D006914 4.5e-46 189.9 199 50.8
MCO13G391 Micromonas commoda HOM05D005088 ORTHO05D006914 1.7e-45 188.0 169 55.0
Zm00001eb110920 Zea mays HOM05D005088 ORTHO05D006914 3.8e-45 186.8 262 42.4
HPP92_010645 Vanilla planifolia HOM05D005088 ORTHO05D006914 6.5e-45 186.0 214 45.3
TAR629G0436 Trochodendron aralioides HOM05D005088 ORTHO05D006914 1.1e-44 185.3 179 50.8
Ciclev10017686m.g Citrus clementina HOM05D005088 ORTHO05D006914 4.2e-44 183.3 195 54.9
SMO347G0658 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 1.0e-42 178.7 178 53.4
SHI10481 Sapria himalayana HOM05D005088 ORTHO05D006914 1.5e-41 174.9 254 42.9
Psat5g064920 Pisum sativum HOM05D005088 ORTHO05D006914 2.8e-40 170.6 223 42.2
COL.COLO4_29189 Corchorus olitorius HOM05D005088 ORTHO05D006914 4.1e-39 166.8 178 48.9
PSO782G2229 Papaver somniferum HOM05D005088 ORTHO05D006914 2.0e-38 164.5 250 41.2
Solyc01g112010.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 7.6e-38 162.5 191 46.6
TAR629G1146 Trochodendron aralioides HOM05D005088 ORTHO05D006914 8.4e-37 159.1 169 50.3
AUR62029179 Chenopodium quinoa HOM05D005088 ORTHO05D006914 7.2e-36 156.0 120 64.2
PRCOL_00000286 Prasinoderma coloniale HOM05D005088 ORTHO05D006914 3.3e-33 147.1 191 44.5
MD09G1021200 Malus domestica HOM05D005088 ORTHO05D006914 2.1e-27 127.9 134 51.5
Sp5g06120 Schrenkiella parvula HOM05D005088 ORTHO05D006914 2.6e-22 110.9 136 48.5
SGA_v2.0_scaffold18G08253 Striga asiatica HOM05D005088 ORTHO05D006914 3.8e-21 107.1 116 50.9
SpUn0233_0020 Schrenkiella parvula HOM05D005088 ORTHO05D006914 1.9e-20 104.8 249 29.7
CDE09G0918 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 2.5e-20 104.4 112 48.2
DCAR_001396 Daucus carota HOM05D005088 ORTHO05D006914 5.5e-20 103.2 130 45.4
BcaB02g08365 Brassica carinata HOM05D005088 ORTHO05D006914 5.1e-18 96.7 194 32.5
Oeu060752.1 Olea europaea HOM05D005088 ORTHO05D006914 9.7e-17 92.4 62 62.9
Sed0009105 Sechium edule HOM05D005088 ORTHO05D006914 1.7e-13 81.6 161 35.4
SMO235G0038 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 2.4e-07 61.2 104 36.5


User provided reference genes

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