Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g20364 Chara braunii HOM05D005801 ORTHO05D008555 0.0e+00 1654.4 881 100.0
Sp3g33210 Schrenkiella parvula HOM05D005801 ORTHO05D008555 7.0e-77 293.1 319 50.5
Thhalv10002296m.g Eutrema salsugineum HOM05D005801 ORTHO05D008555 9.2e-77 292.7 321 50.8
Sopen05g014540 Solanum pennellii HOM05D005801 ORTHO05D008555 2.0e-76 291.6 289 51.9
Carub.0003s3414 Capsella rubella HOM05D005801 ORTHO05D008555 3.5e-76 290.8 320 50.3
BcaB03g16775 Brassica carinata HOM05D005801 ORTHO05D008555 6.0e-76 290.0 320 50.0
BcaC06g36648 Brassica carinata HOM05D005801 ORTHO05D008555 7.8e-76 289.7 321 50.5
BolC7t40588H Brassica oleracea HOM05D005801 ORTHO05D008555 7.8e-76 289.7 321 50.5
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 1.0e-75 289.3 277 53.4
Nitab4.5_0000066g0110 Nicotiana tabacum HOM05D005801 ORTHO05D008555 1.0e-75 289.3 286 51.7
BraA07t27882Z Brassica rapa HOM05D005801 ORTHO05D008555 1.3e-75 288.9 319 50.5
A07p00840 Brassica napus HOM05D005801 ORTHO05D008555 1.7e-75 288.5 319 50.5
PGSC0003DMG400038162 Solanum tuberosum HOM05D005801 ORTHO05D008555 1.7e-75 288.5 289 51.6
Nitab4.5_0001703g0010 Nicotiana tabacum HOM05D005801 ORTHO05D008555 5.0e-75 287.0 286 51.0
unitig_46.g18397 Utricularia gibba HOM05D005801 ORTHO05D008555 5.0e-75 287.0 282 53.5
CAN.G370.29 Capsicum annuum HOM05D005801 ORTHO05D008555 8.6e-75 286.2 289 51.6
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 1.1e-74 285.8 296 51.7
Mapoly0135s0034 Marchantia polymorpha HOM05D005801 ORTHO05D008555 1.5e-74 285.4 362 46.1
Peaxi162Scf00720g00044 Petunia axillaris HOM05D005801 ORTHO05D008555 1.5e-74 285.4 292 51.0
Sc18g0001500 Simmondsia chinensis HOM05D005801 ORTHO05D008555 1.5e-74 285.4 295 49.8
Migut.K00541 Erythranthe guttata HOM05D005801 ORTHO05D008555 1.9e-74 285.0 315 49.5
SalBow1G2797 Salvia bowleyana HOM05D005801 ORTHO05D008555 1.9e-74 285.0 329 47.4
Cc06_g10480 Coffea canephora HOM05D005801 ORTHO05D008555 3.3e-74 284.3 290 51.0
ECA234G2262 Erigeron canadensis HOM05D005801 ORTHO05D008555 7.3e-74 283.1 317 48.6
Gohir.A07G009500 Gossypium hirsutum HOM05D005801 ORTHO05D008555 7.3e-74 283.1 340 47.9
Oeu053186.1 Olea europaea HOM05D005801 ORTHO05D008555 9.5e-74 282.7 313 49.2
Gorai.001G010100 Gossypium raimondii HOM05D005801 ORTHO05D008555 1.2e-73 282.3 340 47.9
CiPaw.04G157900 Carya illinoinensis HOM05D005801 ORTHO05D008555 1.6e-73 282.0 330 48.8
Duzib132G0722 Durio zibethinus HOM05D005801 ORTHO05D008555 1.6e-73 282.0 314 48.7
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 2.1e-73 281.6 277 52.7
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 2.1e-73 281.6 277 52.7
CSS0008146 Camellia sinensis var. sinensis HOM05D005801 ORTHO05D008555 2.8e-73 281.2 333 47.4
Gohir.D07G009800 Gossypium hirsutum HOM05D005801 ORTHO05D008555 2.8e-73 281.2 340 47.6
Rhsim03G0236600 Rhododendron simsii HOM05D005801 ORTHO05D008555 4.7e-73 280.4 334 46.7
SGA_v2.0_scaffold129G34141 Striga asiatica HOM05D005801 ORTHO05D008555 4.7e-73 280.4 278 53.2
COL.COLO4_34743 Corchorus olitorius HOM05D005801 ORTHO05D008555 6.2e-73 280.0 293 50.5
Manes.16G108700 Manihot esculenta HOM05D005801 ORTHO05D008555 6.2e-73 280.0 331 48.0
THA.LOC104814572 Tarenaya hassleriana HOM05D005801 ORTHO05D008555 6.2e-73 280.0 307 48.2
MSTRG.10602 Avicennia marina HOM05D005801 ORTHO05D008555 8.1e-73 279.6 335 47.2
Lj4P387T11 Lonicera japonica HOM05D005801 ORTHO05D008555 1.1e-72 279.3 379 45.6
Solyc05g017990.4 Solanum lycopersicum HOM05D005801 ORTHO05D008555 1.1e-72 279.3 283 51.6
PSO832G4312 Papaver somniferum HOM05D005801 ORTHO05D008555 1.4e-72 278.9 292 51.4
Psat7g016720 Pisum sativum HOM05D005801 ORTHO05D008555 1.4e-72 278.9 325 47.1
Aqoxy7G01401 Aquilegia oxysepala HOM05D005801 ORTHO05D008555 1.8e-72 278.5 291 50.2
EL10Ac8g18377 Beta vulgaris HOM05D005801 ORTHO05D008555 1.8e-72 278.5 323 48.0
TAR636G1320 Trochodendron aralioides HOM05D005801 ORTHO05D008555 1.8e-72 278.5 317 48.6
HanXRQChr10g0318931 Helianthus annuus HOM05D005801 ORTHO05D008555 2.3e-72 278.1 277 52.0
Aa31LG8G16820 Aethionema arabicum HOM05D005801 ORTHO05D008555 3.1e-72 277.7 293 50.5
arahy.Tifrunner.gnm1.ann1.BF4XTR Arachis hypogaea HOM05D005801 ORTHO05D008555 3.1e-72 277.7 326 48.5
DCAR_028663 Daucus carota HOM05D005801 ORTHO05D008555 3.1e-72 277.7 291 49.8
Glyma.08G033500 Glycine max HOM05D005801 ORTHO05D008555 3.1e-72 277.7 291 51.5
PSO063G7511 Papaver somniferum HOM05D005801 ORTHO05D008555 3.1e-72 277.7 292 51.0
Cfa003179 Carpinus fangiana HOM05D005801 ORTHO05D008555 4.0e-72 277.3 341 46.9
QL02p041581 Quercus lobata HOM05D005801 ORTHO05D008555 4.0e-72 277.3 317 47.6
Lj4g0016627 Lotus japonicus HOM05D005801 ORTHO05D008555 6.8e-72 276.6 348 47.1
VMungo0251G1949 Vigna mungo HOM05D005801 ORTHO05D008555 6.8e-72 276.6 331 48.0
C07p01810 Brassica napus HOM05D005801 ORTHO05D008555 1.2e-71 275.8 446 41.7
vmacro06253 Vaccinium macrocarpon HOM05D005801 ORTHO05D008555 1.2e-71 275.8 321 48.6
Prupe.7G219800 Prunus persica HOM05D005801 ORTHO05D008555 1.5e-71 275.4 330 47.0
Ciclev10007826m.g Citrus clementina HOM05D005801 ORTHO05D008555 7.5e-71 273.1 334 46.4
Phvul.002G308600 Phaseolus vulgaris HOM05D005801 ORTHO05D008555 7.5e-71 273.1 331 47.4
TWI63G0976 Tripterygium wilfordii HOM05D005801 ORTHO05D008555 9.8e-71 272.7 319 47.3
CsaV3_1G039790 Cucumis sativus L. HOM05D005801 ORTHO05D008555 1.7e-70 271.9 335 46.6
Thecc.09G100600 Theobroma cacao HOM05D005801 ORTHO05D008555 1.7e-70 271.9 371 43.9
CANSAT21G1751 Cannabis sativa HOM05D005801 ORTHO05D008555 2.9e-70 271.2 338 45.3
Duzib150G1339 Durio zibethinus HOM05D005801 ORTHO05D008555 2.9e-70 271.2 366 44.3
Medtr8g102480 Medicago truncatula HOM05D005801 ORTHO05D008555 2.9e-70 271.2 335 45.7
SHI02689 Sapria himalayana HOM05D005801 ORTHO05D008555 2.9e-70 271.2 319 48.3
Eucgr.C00997 Eucalyptus grandis HOM05D005801 ORTHO05D008555 3.7e-70 270.8 290 50.0
FAN19G0317 Fragaria x ananassa HOM05D005801 ORTHO05D008555 4.9e-70 270.4 324 46.6
AT2G19870 Arabidopsis thaliana HOM05D005801 ORTHO05D008555 6.4e-70 270.0 534 38.0
CDE04G1187 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 6.4e-70 270.0 290 49.3
Pp3c17_17180 Physcomitrium patens HOM05D005801 ORTHO05D008555 6.4e-70 270.0 372 44.9
FAN23G0343 Fragaria x ananassa HOM05D005801 ORTHO05D008555 8.3e-70 269.6 324 46.6
Zm00001eb371210 Zea mays HOM05D005801 ORTHO05D008555 8.3e-70 269.6 336 45.2
CARHR110310 Cardamine hirsuta HOM05D005801 ORTHO05D008555 1.9e-69 268.5 491 39.1
Cpa.g.sc40.94 Carica papaya HOM05D005801 ORTHO05D008555 1.9e-69 268.5 286 50.0
Dinv36686 Davidia involucrata HOM05D005801 ORTHO05D008555 3.2e-69 267.7 310 48.4
MD02G1065700 Malus domestica HOM05D005801 ORTHO05D008555 3.2e-69 267.7 326 45.1
HPP92_009088 Vanilla planifolia HOM05D005801 ORTHO05D008555 3.2e-69 267.7 312 47.4
AL3G48350 Arabidopsis lyrata HOM05D005801 ORTHO05D008555 7.1e-69 266.5 527 38.5
FAN19G1715 Fragaria x ananassa HOM05D005801 ORTHO05D008555 7.1e-69 266.5 352 44.3
FvH4_1g06150 Fragaria vesca HOM05D005801 ORTHO05D008555 1.2e-68 265.8 352 44.3
MELO3C015412.2 Cucumis melo HOM05D005801 ORTHO05D008555 1.6e-68 265.4 321 46.1
FAN28G2516 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.6e-68 265.4 352 44.6
Ca_17365_v3 Cicer arietinum L. HOM05D005801 ORTHO05D008555 2.7e-68 264.6 338 45.0
MBI04_g34406_MAGBIO Magnolia biondii HOM05D005801 ORTHO05D008555 2.7e-68 264.6 286 49.0
Potri.018G087800 Populus trichocarpa HOM05D005801 ORTHO05D008555 2.7e-68 264.6 372 44.4
Sabra18G0076100 Salix brachista HOM05D005801 ORTHO05D008555 2.7e-68 264.6 367 44.4
FAN26G1273 Fragaria x ananassa HOM05D005801 ORTHO05D008555 4.6e-68 263.8 350 43.7
RcHm_v2.0_Chr2g0091911 Rosa chinensis HOM05D005801 ORTHO05D008555 1.7e-67 261.9 359 42.3
ATR0681G166 Amborella trichopoda HOM05D005801 ORTHO05D008555 3.0e-67 261.2 299 46.8
Lalb_Chr05g0223241 Lupinus albus HOM05D005801 ORTHO05D008555 3.0e-67 261.2 370 43.5
Sed0027809 Sechium edule HOM05D005801 ORTHO05D008555 5.1e-67 260.4 335 44.8
FAN26G1315 Fragaria x ananassa HOM05D005801 ORTHO05D008555 2.5e-66 258.1 350 43.7
SMO367G0373 Selaginella moellendorffii HOM05D005801 ORTHO05D008555 1.2e-65 255.8 265 52.5
MD15G1196600 Malus domestica HOM05D005801 ORTHO05D008555 3.2e-61 241.1 254 49.6
AUR62010892 Chenopodium quinoa HOM05D005801 ORTHO05D008555 7.8e-60 236.5 246 50.8
AUR62021403 Chenopodium quinoa HOM05D005801 ORTHO05D008555 1.7e-59 235.3 246 50.0
Actinidia32650 Actinidia chinensis HOM05D005801 ORTHO05D008555 5.6e-58 230.3 332 41.9
PRCOL_00003145 Prasinoderma coloniale HOM05D005801 ORTHO05D008555 3.8e-54 217.6 270 47.8
MCO03G539 Micromonas commoda HOM05D005801 ORTHO05D008555 4.9e-54 217.2 296 45.3
Cre13.g566150 Chlamydomonas reinhardtii HOM05D005801 ORTHO05D008555 5.6e-50 203.8 304 40.8
FvH4_1g06190 Fragaria vesca HOM05D005801 ORTHO05D008555 7.1e-45 186.8 180 51.1
Lj6C67T4 Lonicera japonica HOM05D005801 ORTHO05D008555 9.6e-42 176.4 177 51.4
Lalb_Chr09g0331541 Lupinus albus HOM05D005801 ORTHO05D008555 2.4e-37 161.8 220 41.8
CAN.G640.23 Capsicum annuum HOM05D005801 ORTHO05D008555 1.8e-32 145.6 185 43.2
Os01g0742000 Oryza sativa ssp. japonica HOM05D005801 ORTHO05D008555 1.3e-27 129.4 146 47.9
CDE02G3237 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 2.4e-24 118.6 145 44.8
CAN.G775.15 Capsicum annuum HOM05D005801 ORTHO05D008555 1.1e-21 109.8 99 54.5
HanXRQChr12g0378121 Helianthus annuus HOM05D005801 ORTHO05D008555 4.2e-13 81.3 76 51.3
CAN.G77.3 Capsicum annuum HOM05D005801 ORTHO05D008555 8.2e-09 67.0 80 43.8
CAN.G1277.2 Capsicum annuum HOM05D005801 ORTHO05D008555 1.8e-08 65.9 197 29.4
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 3.1e-08 65.1 257 28.8
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 5.3e-08 64.3 205 27.3
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 6.9e-08 63.9 180 28.3
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 1.5e-07 62.8 167 31.7
AagrBONN_evm.TU.Sc2ySwM_117.170 Anthoceros agrestis HOM05D006539 ORTHO05D008694 1.3e-06 59.7 147 28.6
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 2.9e-06 58.5 188 28.7
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 2.9e-06 58.5 188 28.7
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 2.9e-06 58.5 188 28.7
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 2.9e-06 58.5 185 27.0
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 3.8e-06 58.2 188 28.7
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 3.8e-06 58.2 180 27.2
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 3.8e-06 58.2 159 32.1
Aa31LG11G14170 Aethionema arabicum HOM05D006539 ORTHO05D008694 5.0e-06 57.8 180 28.3
Pp3c12_19160 Physcomitrium patens HOM05D006539 ORTHO05D008694 5.0e-06 57.8 169 25.4
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 5.0e-06 57.8 199 29.6
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 5.0e-06 57.8 172 30.2
Phvul.008G040300 Phaseolus vulgaris HOM05D006539 ORTHO05D008694 6.5e-06 57.4 245 27.8
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 6.5e-06 57.4 188 28.2
Rhsim10G0046900 Rhododendron simsii HOM05D006539 ORTHO05D008694 8.5e-06 57.0 169 29.6


User provided reference genes

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