Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 0.0e+00 1547.7 905 100.0
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 1.0e-139 501.9 1005 40.5
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 5.7e-122 443.0 1021 37.6
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 5.5e-117 426.4 642 45.3
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 1.8e-115 421.4 1021 37.2
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 3.0e-115 420.6 1009 35.4
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 3.9e-115 420.2 1024 37.2
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 6.7e-115 419.5 654 45.3
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 2.2e-113 414.5 1017 36.4
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 4.8e-113 413.3 1017 36.8
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.1e-112 412.1 1019 36.9
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 9.0e-112 409.1 1016 36.0
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 4.5e-111 406.8 1045 35.0
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.7e-110 404.8 1009 35.8
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 2.2e-110 404.4 1004 36.6
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 8.5e-110 402.5 1032 36.3
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 8.5e-110 402.5 1026 36.1
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 3.2e-109 400.6 1002 36.4
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 7.2e-109 399.4 1073 34.5
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 7.2e-109 399.4 1013 36.3
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.2e-108 398.7 1074 35.1
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 2.7e-108 397.5 1032 35.4
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 2.7e-108 397.5 1035 36.0
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 3.6e-108 397.1 1064 35.4
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 4.6e-108 396.7 1019 36.1
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 6.1e-108 396.4 1037 35.6
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 6.1e-108 396.4 1043 35.1
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 7.9e-108 396.0 1022 36.4
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 1.0e-107 395.6 640 43.3
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 2.3e-107 394.4 1022 35.4
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 2.3e-107 394.4 1008 35.4
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 5.1e-107 393.3 1048 34.7
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 5.1e-107 393.3 1019 36.4
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 5.1e-107 393.3 1051 35.9
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 6.7e-107 392.9 1072 34.3
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 8.8e-107 392.5 1016 34.7
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 1.1e-106 392.1 1016 35.4
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 2.0e-106 391.3 1028 34.6
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 2.0e-106 391.3 1058 35.2
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 2.5e-106 391.0 1016 34.7
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 3.3e-106 390.6 1038 34.8
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 3.3e-106 390.6 1030 36.0
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 3.3e-106 390.6 1034 35.1
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 4.3e-106 390.2 1042 35.3
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 5.7e-106 389.8 1031 35.2
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 7.4e-106 389.4 1051 34.2
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.7e-105 388.3 1075 34.6
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 2.2e-105 387.9 1025 34.8
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 2.2e-105 387.9 768 41.0
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 8.2e-105 386.0 1012 35.4
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.8e-104 384.8 1019 35.4
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 1.8e-104 384.8 1061 34.7
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 2.4e-104 384.4 1071 34.4
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.4e-104 384.4 1023 35.4
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 4.1e-104 383.6 1030 35.2
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 5.3e-104 383.3 1033 34.7
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 6.9e-104 382.9 1062 33.7
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 6.9e-104 382.9 1030 35.1
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 9.1e-104 382.5 744 40.2
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 9.1e-104 382.5 1061 35.0
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 1.2e-103 382.1 1047 34.2
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 1.5e-103 381.7 1014 35.3
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 1.5e-103 381.7 1001 34.5
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 2.6e-103 380.9 1033 35.2
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 5.9e-103 379.8 1032 35.9
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 5.9e-103 379.8 1022 35.4
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 5.9e-103 379.8 1050 34.8
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 5.9e-103 379.8 1026 34.1
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 1.0e-102 379.0 1017 34.7
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 1.3e-102 378.6 1014 35.2
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 2.9e-102 377.5 858 36.6
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 2.9e-102 377.5 1025 34.4
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 2.9e-102 377.5 1024 35.1
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 2.9e-102 377.5 1037 34.4
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 6.5e-102 376.3 1029 34.7
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 8.5e-102 375.9 1046 34.9
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 8.5e-102 375.9 1046 34.5
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 8.5e-102 375.9 1024 35.2
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 1.4e-101 375.2 1054 34.0
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 2.5e-101 374.4 1020 35.2
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 2.5e-101 374.4 1028 35.0
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 3.2e-101 374.0 1052 34.8
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 4.2e-101 373.6 1020 35.0
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 5.5e-101 373.2 1036 34.6
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 5.5e-101 373.2 1031 35.2
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 7.2e-101 372.9 731 39.4
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 9.4e-101 372.5 1036 33.2
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 2.1e-100 371.3 1050 34.0
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 7.9e-100 369.4 825 36.8
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 7.9e-100 369.4 1068 33.6
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 1.8e-99 368.2 1034 33.8
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 1.8e-99 368.2 1029 34.1
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 2.3e-99 367.9 1022 34.7
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 1.1e-98 365.5 1048 34.5
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.5e-98 365.2 1026 35.0
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 1.5e-98 365.2 1033 33.5
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 2.0e-98 364.8 1064 33.3
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 9.7e-98 362.5 1014 34.3
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 1.7e-97 361.7 1009 33.9
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 1.7e-97 361.7 1065 32.8
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 4.8e-97 360.1 999 34.3
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 8.2e-97 359.4 1038 33.7
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 8.2e-97 359.4 1053 33.8
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 2.4e-96 357.8 1037 34.9
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 1.2e-95 355.5 1088 34.2
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 5.9e-95 353.2 1032 33.8
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 1.0e-94 352.4 1065 31.3
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 5.0e-94 350.1 1002 33.7
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 7.2e-93 346.3 1007 34.3
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 7.2e-93 346.3 1025 32.7
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 9.4e-93 345.9 1036 33.0
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 1.2e-92 345.5 1047 35.4
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 4.7e-92 343.6 1108 32.2
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 5.2e-91 340.1 1095 32.3
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 5.2e-91 340.1 1045 32.7
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 6.7e-91 339.7 1015 33.7
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 1.1e-90 339.0 991 33.6
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 3.3e-90 337.4 492 47.6
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 3.3e-90 337.4 1047 32.5
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 1.3e-89 335.5 1011 33.6
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 4.5e-87 327.0 1052 31.2
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 3.6e-84 317.4 1183 30.5
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 1.2e-82 312.4 1020 31.2
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 5.9e-79 300.1 1031 32.8
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 1.8e-72 278.5 405 46.9
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 1.7e-70 271.9 585 37.1
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 4.7e-60 237.3 1102 28.5
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 2.0e-58 231.9 796 32.0
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 3.1e-51 208.0 912 28.6
unitig_46.g18558 Utricularia gibba HOM05D003521 ORTHO05D000476 9.9e-42 176.4 422 34.4
TPR.G5155 Trifolium pratense HOM05D003521 ORTHO05D000476 5.2e-35 154.1 137 62.8
SMO298G0028 Selaginella moellendorffii HOM05D003521 ORTHO05D000476 1.9e-32 145.6 386 34.5
Lsat_1_v5_gn_4_102620 Lactuca sativa HOM05D003521 ORTHO05D000476 9.3e-32 143.3 152 54.6
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 1.3e-28 132.9 809 26.8
CDE08G0544 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 2.1e-28 132.1 187 47.6
CAN.G395.28 Capsicum annuum HOM05D003521 ORTHO05D000476 2.8e-28 131.7 345 42.3
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 1.5e-26 125.9 521 32.1
AagrBONN_evm.TU.Sc2ySwM_344.1934 Anthoceros agrestis HOM05D003521 ORTHO05D000476 4.4e-26 124.4 377 30.8
HanXRQChr16g0500831 Helianthus annuus HOM05D003521 ORTHO05D000476 6.6e-22 110.5 87 63.2
arahy.Tifrunner.gnm1.ann1.J2PPD0 Arachis hypogaea HOM05D003521 ORTHO05D000476 8.4e-17 93.6 99 53.5
Cpa.g.c29821 Carica papaya HOM05D003521 ORTHO05D000476 1.4e-16 92.8 121 47.9
arahy.Tifrunner.gnm1.ann1.SA7FDN Arachis hypogaea HOM05D003521 ORTHO05D000476 9.3e-16 90.1 64 68.8
Cre03.g187000 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D000476 1.6e-15 89.4 685 25.3
MELO3C034685.2 Cucumis melo HOM05D003521 ORTHO05D000476 2.7e-15 88.6 89 53.9
CAN.G135.35 Capsicum annuum HOM05D003521 ORTHO05D000476 6.0e-15 87.4 167 38.9
CBR_g37651 Chara braunii HOM05D003521 ORTHO05D000476 2.3e-14 85.5 582 28.7
Lsat_1_v5_gn_4_178240 Lactuca sativa HOM05D003521 ORTHO05D000476 2.3e-14 85.5 105 50.5
TPR.G19044 Trifolium pratense HOM05D003521 ORTHO05D000476 1.3e-12 79.7 87 51.7
Ca_25389_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.6e-12 79.3 111 42.3
HanXRQChr11g0325911 Helianthus annuus HOM05D003521 ORTHO05D000476 4.8e-12 77.8 84 50.0
Ca_31247_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.4e-11 76.3 91 47.3
Mapoly0111s0038 Marchantia polymorpha HOM05D003521 ORTHO05D000476 5.8e-10 70.9 691 22.3
Lsat_1_v5_gn_2_62580 Lactuca sativa HOM05D003521 ORTHO05D000476 1.0e-09 70.1 61 65.6
MCO14G500 Micromonas commoda HOM05D003521 ORTHO05D000476 1.3e-09 69.7 584 24.0
Lsat_1_v5_gn_4_102600 Lactuca sativa HOM05D003521 ORTHO05D000476 2.2e-09 68.9 74 55.4
Actinidia32725 Actinidia chinensis HOM05D003521 ORTHO05D000476 4.9e-09 67.8 96 39.6
CARHR143550 Cardamine hirsuta HOM05D003521 ORTHO05D000476 4.9e-09 67.8 80 46.2
TPR.G7293 Trifolium pratense HOM05D003521 ORTHO05D000476 6.5e-09 67.4 129 41.1
BolC1t05061H Brassica oleracea HOM05D003521 ORTHO05D000476 2.5e-08 65.5 86 52.3
SEGI_27505 Sequoiadendron giganteum HOM05D003521 ORTHO05D000476 4.2e-08 64.7 452 26.1
unitig_52.g17085 Utricularia gibba HOM05D003521 ORTHO05D000476 3.5e-07 61.6 167 34.7
Cre09.g400812 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D138729 1.3e-06 59.7 104 37.5
AagrBONN_evm.TU.Sc2ySwM_344.1936 Anthoceros agrestis HOM05D003521 ORTHO05D000476 8.7e-06 57.0 336 24.4


User provided reference genes

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