Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g12551 Chara braunii HOM05D005254 ORTHO05D131495 1.1e-64 250.0 140 100.0
AL5G45120 Arabidopsis lyrata HOM05D005254 ORTHO05D007557 6.0e-15 84.7 94 47.9
TWI36G0433 Tripterygium wilfordii HOM05D005254 ORTHO05D007557 7.9e-15 84.3 82 53.7
Lalb_Chr04g0260001 Lupinus albus HOM05D005254 ORTHO05D007557 1.3e-14 83.6 78 53.8
Atru.chr5.974 Acer truncatum HOM05D005254 ORTHO05D007557 1.8e-14 83.2 95 47.4
ECA248G2092 Erigeron canadensis HOM05D005254 ORTHO05D007557 1.8e-14 83.2 83 51.8
Aqoxy5G02683 Aquilegia oxysepala HOM05D005254 ORTHO05D007557 2.3e-14 82.8 87 47.1
CARHR172690 Cardamine hirsuta HOM05D005254 ORTHO05D007557 2.3e-14 82.8 94 46.8
Cc01_g21580 Coffea canephora HOM05D005254 ORTHO05D007557 2.3e-14 82.8 103 45.6
Sp5g01040 Schrenkiella parvula HOM05D005254 ORTHO05D007557 2.3e-14 82.8 94 45.7
Aa31LG10G16290 Aethionema arabicum HOM05D005254 ORTHO05D007557 3.0e-14 82.4 94 45.7
A09p54350 Brassica napus HOM05D005254 ORTHO05D007557 3.0e-14 82.4 94 47.9
BraA09t40847Z Brassica rapa HOM05D005254 ORTHO05D007557 3.0e-14 82.4 94 46.8
Ca_09219_v3 Cicer arietinum L. HOM05D005254 ORTHO05D007557 3.0e-14 82.4 96 44.8
Thhalv10005752m.g Eutrema salsugineum HOM05D005254 ORTHO05D007557 3.0e-14 82.4 101 43.6
Lalb_Chr15g0078051 Lupinus albus HOM05D005254 ORTHO05D007557 3.0e-14 82.4 101 44.6
TPR.G4086 Trifolium pratense HOM05D005254 ORTHO05D007557 3.0e-14 82.4 78 52.6
BcaC07g40720 Brassica carinata HOM05D005254 ORTHO05D007557 3.9e-14 82.0 94 47.9
BcaC07g40722 Brassica carinata HOM05D005254 ORTHO05D007557 3.9e-14 82.0 94 47.9
BolC8t51301H Brassica oleracea HOM05D005254 ORTHO05D007557 3.9e-14 82.0 94 47.9
Ciclev10018561m.g Citrus clementina HOM05D005254 ORTHO05D007557 3.9e-14 82.0 94 45.7
FvH4_1g27060 Fragaria vesca HOM05D005254 ORTHO05D007557 3.9e-14 82.0 95 46.3
FAN19G0333 Fragaria x ananassa HOM05D005254 ORTHO05D007557 3.9e-14 82.0 95 46.3
Glyma.19G217500 Glycine max HOM05D005254 ORTHO05D007557 3.9e-14 82.0 94 44.7
Psat0s425g0240 Pisum sativum HOM05D005254 ORTHO05D007557 3.9e-14 82.0 96 43.8
BcaC08g45197 Brassica carinata HOM05D005254 ORTHO05D007557 5.1e-14 81.6 83 47.0
C08p37230 Brassica napus HOM05D005254 ORTHO05D007557 5.1e-14 81.6 94 47.9
Carub.0005s2908 Capsella rubella HOM05D005254 ORTHO05D007557 5.1e-14 81.6 94 45.7
FAN26G2945 Fragaria x ananassa HOM05D005254 ORTHO05D007557 5.1e-14 81.6 102 46.1
AT3G62360 Arabidopsis thaliana HOM05D005254 ORTHO05D007557 6.7e-14 81.3 94 45.7
CANSAT25G1517 Cannabis sativa HOM05D005254 ORTHO05D007557 6.7e-14 81.3 78 52.6
Phvul.001G214200 Phaseolus vulgaris HOM05D005254 ORTHO05D007557 8.7e-14 80.9 94 44.7
TAR633G1480 Trochodendron aralioides HOM05D005254 ORTHO05D007557 8.7e-14 80.9 81 50.6
C06p28230 Brassica napus HOM05D005254 ORTHO05D007557 1.1e-13 80.5 80 48.8
Manes.05G014200 Manihot esculenta HOM05D005254 ORTHO05D007557 1.1e-13 80.5 80 51.2
Prupe.3G010500 Prunus persica HOM05D005254 ORTHO05D007557 1.1e-13 80.5 96 44.8
RcHm_v2.0_Chr3g0487381 Rosa chinensis HOM05D005254 ORTHO05D007557 1.1e-13 80.5 95 46.3
SEGI_30263 Sequoiadendron giganteum HOM05D005254 ORTHO05D007557 1.1e-13 80.5 96 46.9
Lj1g0000440 Lotus japonicus HOM05D005254 ORTHO05D007557 1.5e-13 80.1 92 44.6
Nn3g21729 Nelumbo nucifera HOM05D005254 ORTHO05D007557 1.5e-13 80.1 91 49.5
AUR62032507 Chenopodium quinoa HOM05D005254 ORTHO05D007557 1.9e-13 79.7 93 44.1
FAN23G1174 Fragaria x ananassa HOM05D005254 ORTHO05D007557 1.9e-13 79.7 102 45.1
Medtr7g109730 Medicago truncatula HOM05D005254 ORTHO05D007557 1.9e-13 79.7 78 51.3
PSO170G0810 Papaver somniferum HOM05D005254 ORTHO05D007557 1.9e-13 79.7 98 43.9
BcaC07g42749 Brassica carinata HOM05D005254 ORTHO05D007557 2.5e-13 79.3 80 50.0
Glyma.03G220700 Glycine max HOM05D005254 ORTHO05D007557 2.5e-13 79.3 94 43.6
Gohir.D08G140700 Gossypium hirsutum HOM05D005254 ORTHO05D007557 2.5e-13 79.3 77 49.4
Peaxi162Scf00058g02631 Petunia axillaris HOM05D005254 ORTHO05D007557 2.5e-13 79.3 96 43.8
arahy.Tifrunner.gnm1.ann1.AYF5PU Arachis hypogaea HOM05D005254 ORTHO05D007557 3.3e-13 79.0 94 43.6
COL.COLO4_23211 Corchorus olitorius HOM05D005254 ORTHO05D007557 3.3e-13 79.0 82 48.8
Sed0001136 Sechium edule HOM05D005254 ORTHO05D007557 3.3e-13 79.0 83 49.4
Sc17g0000380 Simmondsia chinensis HOM05D005254 ORTHO05D007557 3.3e-13 79.0 92 48.9
THA.LOC104802150 Tarenaya hassleriana HOM05D005254 ORTHO05D007557 3.3e-13 79.0 94 44.7
CiPaw.07G119100 Carya illinoinensis HOM05D005254 ORTHO05D007557 4.3e-13 78.6 80 51.2
Hma1.2p1_0486F.1_g163430 Hydrangea macrophylla HOM05D005254 ORTHO05D007557 4.3e-13 78.6 81 51.9
MD17G1277500 Malus domestica HOM05D005254 ORTHO05D007557 4.3e-13 78.6 78 51.3
SMO145G0116 Selaginella moellendorffii HOM05D005254 ORTHO05D007557 4.3e-13 78.6 98 41.8
Solyc06g009530.3 Solanum lycopersicum HOM05D005254 ORTHO05D007557 4.3e-13 78.6 103 44.7
Sopen06g004190 Solanum pennellii HOM05D005254 ORTHO05D007557 4.3e-13 78.6 103 44.7
arahy.Tifrunner.gnm1.ann1.72UXVZ Arachis hypogaea HOM05D005254 ORTHO05D007557 5.7e-13 78.2 94 43.6
AUR62043231 Chenopodium quinoa HOM05D005254 ORTHO05D007557 5.7e-13 78.2 93 43.0
DCAR_018280 Daucus carota HOM05D005254 ORTHO05D007557 5.7e-13 78.2 79 49.4
Eucgr.H00999 Eucalyptus grandis HOM05D005254 ORTHO05D007557 5.7e-13 78.2 98 42.9
Gorai.004G144800 Gossypium raimondii HOM05D005254 ORTHO05D007557 5.7e-13 78.2 77 49.4
MBI18_g03638_MAGBIO Magnolia biondii HOM05D005254 ORTHO05D007557 5.7e-13 78.2 97 46.4
PGR083G2196 Punica granatum HOM05D005254 ORTHO05D007557 5.7e-13 78.2 99 43.4
VMungo1383G0540 Vigna mungo HOM05D005254 ORTHO05D007557 5.7e-13 78.2 94 42.6
GSVIVG01028140001 Vitis vinifera HOM05D005254 ORTHO05D007557 5.7e-13 78.2 80 47.5
Ah.02g112410 Amaranthus hybridus HOM05D005254 ORTHO05D007557 7.4e-13 77.8 64 54.7
CAN.G1280.35 Capsicum annuum HOM05D005254 ORTHO05D007557 7.4e-13 77.8 79 50.6
Migut.N00932 Erythranthe guttata HOM05D005254 ORTHO05D007557 7.4e-13 77.8 68 54.4
Migut.O00532 Erythranthe guttata HOM05D005254 ORTHO05D007557 7.4e-13 77.8 68 54.4
ClCG09G004990 Citrullus lanatus HOM05D005254 ORTHO05D007557 9.6e-13 77.4 101 45.5
Pp3c14_26400 Physcomitrium patens HOM05D005254 ORTHO05D007557 9.6e-13 77.4 81 50.6
Hund09648 Selenicereus undatus HOM05D005254 ORTHO05D007557 9.6e-13 77.4 101 46.5
EL10As5g23556 Beta vulgaris HOM05D005254 ORTHO05D007557 1.3e-12 77.0 79 48.1
CsaV3_7G030070 Cucumis sativus L. HOM05D005254 ORTHO05D007557 1.3e-12 77.0 98 46.9
Thecc.01G315800 Theobroma cacao HOM05D005254 ORTHO05D007557 1.3e-12 77.0 87 44.8
Actinidia25861 Actinidia chinensis HOM05D005254 ORTHO05D007557 1.6e-12 76.6 79 54.4
Dinv10118 Davidia involucrata HOM05D005254 ORTHO05D007557 1.6e-12 76.6 98 48.0
Duzib133G0392 Durio zibethinus HOM05D005254 ORTHO05D007557 1.6e-12 76.6 82 48.8
vmacro15105 Vaccinium macrocarpon HOM05D005254 ORTHO05D007557 1.6e-12 76.6 74 51.4
HanXRQChr01g0000761 Helianthus annuus HOM05D005254 ORTHO05D007557 2.1e-12 76.3 75 50.7
QL12p019422 Quercus lobata HOM05D005254 ORTHO05D007557 2.1e-12 76.3 94 43.6
Rhsim01G0292000 Rhododendron simsii HOM05D005254 ORTHO05D007557 2.1e-12 76.3 77 50.6
CSS0023845 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 2.8e-12 75.9 97 44.3
CSS0038291 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 2.8e-12 75.9 97 44.3
CSS0046339 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 2.8e-12 75.9 97 44.3
Gohir.A08G119800 Gossypium hirsutum HOM05D005254 ORTHO05D007557 2.8e-12 75.9 82 46.3
SalBow2G1139 Salvia bowleyana HOM05D005254 ORTHO05D007557 2.8e-12 75.9 64 53.1
MSTRG.17387 Avicennia marina HOM05D005254 ORTHO05D007557 3.7e-12 75.5 87 47.1
CDE01G0437 Ceratophyllum demersum HOM05D005254 ORTHO05D007557 3.7e-12 75.5 84 44.0
MELO3C015914.2 Cucumis melo HOM05D005254 ORTHO05D007557 3.7e-12 75.5 100 43.0
Nitab4.5_0000363g0240 Nicotiana tabacum HOM05D005254 ORTHO05D007557 3.7e-12 75.5 102 41.2
Oeu049924.2 Olea europaea HOM05D005254 ORTHO05D007557 3.7e-12 75.5 82 47.6
Potri.002G194000 Populus trichocarpa HOM05D005254 ORTHO05D007557 3.7e-12 75.5 90 46.7
Sed0015859 Sechium edule HOM05D005254 ORTHO05D007557 3.7e-12 75.5 101 44.6
Haze_05067 Corylus avellana HOM05D005254 ORTHO05D007557 4.8e-12 75.1 81 50.6
Sabra02G0162400 Salix brachista HOM05D005254 ORTHO05D007557 4.8e-12 75.1 95 44.2
MD09G1284300 Malus domestica HOM05D005254 ORTHO05D007557 6.3e-12 74.7 78 50.0
PSO357G0205 Papaver somniferum HOM05D005254 ORTHO05D007557 6.3e-12 74.7 98 42.9
Lsat_1_v5_gn_5_191360 Lactuca sativa HOM05D005254 ORTHO05D007557 1.1e-11 73.9 93 43.0
Zm00001eb340350 Zea mays HOM05D005254 ORTHO05D007557 1.8e-11 73.2 89 43.8
Actinidia20982 Actinidia chinensis HOM05D005254 ORTHO05D007557 5.3e-11 71.6 83 48.2
HPP92_011729 Vanilla planifolia HOM05D005254 ORTHO05D007557 5.3e-11 71.6 65 50.8
ATR0693G194 Amborella trichopoda HOM05D005254 ORTHO05D007557 6.9e-11 71.2 63 54.0
SGA_v2.0_scaffold6G03340 Striga asiatica HOM05D005254 ORTHO05D007557 6.9e-11 71.2 66 53.0
unitig_22.g6696 Utricularia gibba HOM05D005254 ORTHO05D007557 6.9e-11 71.2 88 42.0
Mapoly0002s0320 Marchantia polymorpha HOM05D005254 ORTHO05D007557 1.2e-10 70.5 87 39.1
Lj1C15G16 Lonicera japonica HOM05D005254 ORTHO05D007557 5.0e-09 65.1 63 54.0
Cfa005773 Carpinus fangiana HOM05D005254 ORTHO05D007557 7.2e-08 61.2 68 50.0
Cpa.g.sc18.72 Carica papaya HOM05D005254 ORTHO05D007557 9.3e-08 60.8 64 50.0


User provided reference genes

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