Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR251520 Cardamine hirsuta HOM05D003625 ORTHO05D004382 0.0e+00 1109.4 563 100.0
AL6G49860 Arabidopsis lyrata HOM05D003625 ORTHO05D004382 7.3e-245 850.5 555 78.2
AT4G03090 Arabidopsis thaliana HOM05D003625 ORTHO05D004382 5.2e-243 844.3 553 77.8
Carub.0006s3397 Capsella rubella HOM05D003625 ORTHO05D004382 2.2e-233 812.4 556 75.5
Sp6g03120 Schrenkiella parvula HOM05D003625 ORTHO05D004382 1.0e-222 776.9 557 70.2
Thhalv10028409m.g Eutrema salsugineum HOM05D003625 ORTHO05D004382 7.4e-221 770.8 558 70.8
Aa31LG5G2610 Aethionema arabicum HOM05D003625 ORTHO05D004382 4.8e-220 768.1 547 70.7
BraA09t35887Z Brassica rapa HOM05D003625 ORTHO05D004382 5.3e-211 738.0 565 66.9
BolC9t53180H Brassica oleracea HOM05D003625 ORTHO05D004382 9.0e-211 737.3 559 66.9
BcaB01g01939 Brassica carinata HOM05D003625 ORTHO05D004382 1.2e-210 736.9 562 66.0
C09p02500 Brassica napus HOM05D003625 ORTHO05D004382 1.2e-210 736.9 559 66.9
A09p02400 Brassica napus HOM05D003625 ORTHO05D004382 2.0e-210 736.1 560 67.0
BcaB01g01983 Brassica carinata HOM05D003625 ORTHO05D004382 7.6e-210 734.2 559 66.5
BcaC03g16206 Brassica carinata HOM05D003625 ORTHO05D004382 1.7e-188 663.3 584 60.1
THA.LOC104801203 Tarenaya hassleriana HOM05D003625 ORTHO05D004382 1.1e-187 660.6 550 63.1
BraA02t07497Z Brassica rapa HOM05D003625 ORTHO05D004382 2.2e-185 652.9 559 61.2
BolC2t10009H Brassica oleracea HOM05D003625 ORTHO05D004382 8.2e-180 634.4 560 60.5
A02p25090 Brassica napus HOM05D003625 ORTHO05D004382 1.0e-174 617.5 584 57.7
C02p39820 Brassica napus HOM05D003625 ORTHO05D004382 2.0e-165 586.6 585 56.2
BcaB05g23686 Brassica carinata HOM05D003625 ORTHO05D004382 2.5e-160 569.7 559 56.7
Cpa.g.sc60.39 Carica papaya HOM05D003625 ORTHO05D004382 5.4e-147 525.4 553 52.4
Potri.002G213400 Populus trichocarpa HOM05D003625 ORTHO05D004382 1.2e-146 524.2 554 52.0
Potri.014G135700 Populus trichocarpa HOM05D003625 ORTHO05D004382 4.6e-146 522.3 554 52.0
Manes.03G013700 Manihot esculenta HOM05D003625 ORTHO05D004382 2.5e-144 516.5 552 50.9
COL.COLO4_09853 Corchorus olitorius HOM05D003625 ORTHO05D004382 2.6e-141 506.5 563 50.3
Thecc.07G010400 Theobroma cacao HOM05D003625 ORTHO05D004382 4.9e-140 502.3 563 50.1
RcHm_v2.0_Chr6g0292351 Rosa chinensis HOM05D003625 ORTHO05D004382 6.4e-140 501.9 563 49.2
Sabra14G0102100 Salix brachista HOM05D003625 ORTHO05D004382 2.4e-139 500.0 601 48.1
Gorai.009G451700 Gossypium raimondii HOM05D003625 ORTHO05D004382 1.2e-138 497.7 564 48.9
Gohir.D05G385000 Gossypium hirsutum HOM05D003625 ORTHO05D004382 1.3e-137 494.2 564 48.4
TWI59G0316 Tripterygium wilfordii HOM05D003625 ORTHO05D004382 1.7e-137 493.8 553 49.9
Cfa011439 Carpinus fangiana HOM05D003625 ORTHO05D004382 1.5e-136 490.7 556 50.2
CANSAT25G1777 Cannabis sativa HOM05D003625 ORTHO05D004382 2.1e-135 486.9 554 49.3
Ciclev10018730m.g Citrus clementina HOM05D003625 ORTHO05D004382 6.2e-135 485.3 559 49.9
QL12p023448 Quercus lobata HOM05D003625 ORTHO05D004382 4.0e-134 482.6 563 48.8
QL93p2003_0013 Quercus lobata HOM05D003625 ORTHO05D004382 4.0e-134 482.6 563 48.8
Sabra02G0149300 Salix brachista HOM05D003625 ORTHO05D004382 4.0e-134 482.6 554 49.5
Gohir.A04G004900 Gossypium hirsutum HOM05D003625 ORTHO05D004382 6.8e-134 481.9 564 48.2
GSVIVG01011024001 Vitis vinifera HOM05D003625 ORTHO05D004382 1.7e-132 477.2 555 49.7
Prupe.8G250800 Prunus persica HOM05D003625 ORTHO05D004382 1.9e-131 473.8 557 47.8
Eucgr.C03805 Eucalyptus grandis HOM05D003625 ORTHO05D004382 3.2e-131 473.0 549 49.7
Cfa006055 Carpinus fangiana HOM05D003625 ORTHO05D006197 4.1e-131 472.6 563 47.8
FvH4_2g24490 Fragaria vesca HOM05D003625 ORTHO05D004382 7.1e-131 471.9 553 48.3
FAN24G2516 Fragaria x ananassa HOM05D003625 ORTHO05D004382 1.2e-130 471.1 553 48.5
FAN27G0529 Fragaria x ananassa HOM05D003625 ORTHO05D004382 6.0e-130 468.8 553 47.9
MD02G1277900 Malus domestica HOM05D003625 ORTHO05D004382 2.3e-129 466.8 567 46.7
PGR044G2464 Punica granatum HOM05D003625 ORTHO05D004382 8.6e-129 464.9 548 48.2
FAN20G2140 Fragaria x ananassa HOM05D003625 ORTHO05D004382 1.5e-128 464.2 553 47.6
Lalb_Chr22g0350011 Lupinus albus HOM05D003625 ORTHO05D004382 1.6e-127 460.7 560 47.3
arahy.Tifrunner.gnm1.ann1.6HBC95 Arachis hypogaea HOM05D003625 ORTHO05D004382 4.7e-127 459.1 551 47.7
arahy.Tifrunner.gnm1.ann1.E19P6N Arachis hypogaea HOM05D003625 ORTHO05D004382 4.7e-127 459.1 551 47.7
Sed0013189 Sechium edule HOM05D003625 ORTHO05D004382 6.2e-127 458.8 555 47.7
CiPaw.08G101000 Carya illinoinensis HOM05D003625 ORTHO05D004382 1.1e-126 458.0 565 46.2
FAN15G0592 Fragaria x ananassa HOM05D003625 ORTHO05D004382 3.1e-126 456.4 576 46.2
Ca_19197_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 3.4e-125 453.0 556 48.0
CsaV3_1G033940 Cucumis sativus L. HOM05D003625 ORTHO05D004382 5.8e-125 452.2 556 47.3
Phvul.L001843 Phaseolus vulgaris HOM05D003625 ORTHO05D004382 1.1e-123 448.0 567 46.9
Lj3g0001853 Lotus japonicus HOM05D003625 ORTHO05D004382 4.2e-123 446.0 545 47.3
Ca_01352_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 3.5e-122 443.0 543 46.2
Glyma.13G332300 Glycine max HOM05D003625 ORTHO05D004382 4.6e-122 442.6 553 47.2
VMungo1080G0322 Vigna mungo HOM05D003625 ORTHO05D004382 4.6e-122 442.6 567 46.4
Glyma.15G042000 Glycine max HOM05D003625 ORTHO05D004382 3.0e-121 439.9 552 46.6
MELO3C020662.2 Cucumis melo HOM05D003625 ORTHO05D004382 5.1e-121 439.1 541 47.0
Duzib170G0264 Durio zibethinus HOM05D003625 ORTHO05D004382 5.1e-121 439.1 554 46.6
Psat5g282480 Pisum sativum HOM05D003625 ORTHO05D004382 1.9e-120 437.2 538 45.7
Medtr2g096290 Medicago truncatula HOM05D003625 ORTHO05D004382 3.6e-119 433.0 543 45.9
TAR365G1186 Trochodendron aralioides HOM05D003625 ORTHO05D004382 1.4e-118 431.0 571 43.6
Dinv32982 Davidia involucrata HOM05D003625 ORTHO05D004382 1.8e-118 430.6 557 45.6
Haze_24021 Corylus avellana HOM05D003625 ORTHO05D004382 6.9e-118 428.7 554 46.8
Medtr4g063030 Medicago truncatula HOM05D003625 ORTHO05D004382 9.0e-118 428.3 544 45.8
arahy.Tifrunner.gnm1.ann1.TJRY6P Arachis hypogaea HOM05D003625 ORTHO05D004382 2.9e-116 423.3 548 45.3
TPR.G1039 Trifolium pratense HOM05D003625 ORTHO05D004382 6.4e-116 422.2 555 45.2
EL10Ac7g17149 Beta vulgaris HOM05D003625 ORTHO05D004382 8.4e-116 421.8 544 45.8
Lalb_Chr01g0003851 Lupinus albus HOM05D003625 ORTHO05D004382 1.9e-115 420.6 541 47.0
Lj3g0005082 Lotus japonicus HOM05D003625 ORTHO05D004382 4.2e-115 419.5 544 45.8
arahy.Tifrunner.gnm1.ann1.L6Y1E3 Arachis hypogaea HOM05D003625 ORTHO05D004382 1.3e-113 414.5 542 44.5
Duzib213G0855 Durio zibethinus HOM05D003625 ORTHO05D004382 3.9e-113 412.9 475 49.5
ClCG03G001700 Citrullus lanatus HOM05D003625 ORTHO05D004382 5.1e-113 412.5 580 43.3
Psat7g219280 Pisum sativum HOM05D003625 ORTHO05D004382 1.6e-111 407.5 556 44.2
Nn3g21233 Nelumbo nucifera HOM05D003625 ORTHO05D004382 2.1e-111 407.1 572 43.4
Cc01_g20080 Coffea canephora HOM05D003625 ORTHO05D004382 2.8e-111 406.8 556 44.1
vmacro02517 Vaccinium macrocarpon HOM05D003625 ORTHO05D004382 4.0e-110 402.9 560 43.2
Solyc09g074330.3 Solanum lycopersicum HOM05D003625 ORTHO05D004382 5.3e-110 402.5 554 43.5
Sopen09g029170 Solanum pennellii HOM05D003625 ORTHO05D004382 1.2e-109 401.4 554 43.5
Hma1.2p1_0209F.1_g089230 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 2.0e-109 400.6 548 43.8
Nitab4.5_0010231g0010 Nicotiana tabacum HOM05D003625 ORTHO05D004382 4.5e-109 399.4 544 43.8
Oeu022807.1 Olea europaea HOM05D003625 ORTHO05D004382 3.8e-108 396.4 541 42.0
Nitab4.5_0001651g0100 Nicotiana tabacum HOM05D003625 ORTHO05D004382 1.1e-107 394.8 543 44.0
Dinv11285 Davidia involucrata HOM05D003625 ORTHO05D004382 3.2e-107 393.3 553 43.8
Aqoxy2G00575 Aquilegia oxysepala HOM05D003625 ORTHO05D004382 6.0e-106 389.0 575 40.9
Duzib268G0343 Durio zibethinus HOM05D003625 ORTHO05D004382 3.0e-105 386.7 449 48.1
QL01p033546 Quercus lobata HOM05D003625 ORTHO05D004382 3.9e-105 386.3 470 47.9
CAN.G426.9 Capsicum annuum HOM05D003625 ORTHO05D004382 7.4e-104 382.1 547 42.8
AUR62034599 Chenopodium quinoa HOM05D003625 ORTHO05D004382 1.6e-103 380.9 505 43.6
Haze_04796 Corylus avellana HOM05D003625 ORTHO05D004382 8.1e-103 378.6 590 41.0
Lsat_1_v5_gn_8_55721 Lactuca sativa HOM05D003625 ORTHO05D004382 1.4e-102 377.9 546 42.9
Zm00001eb165880 Zea mays HOM05D003625 ORTHO05D004382 1.8e-102 377.5 543 41.3
ATR0626G050 Amborella trichopoda HOM05D003625 ORTHO05D004382 4.0e-102 376.3 547 39.7
MSTRG.18201 Avicennia marina HOM05D003625 ORTHO05D004382 1.2e-101 374.8 546 41.4
PSO170G6480 Papaver somniferum HOM05D003625 ORTHO05D004382 3.4e-101 373.2 564 41.8
Zm00001eb115600 Zea mays HOM05D003625 ORTHO05D004382 3.8e-100 369.8 543 40.3
PSO407G0030 Papaver somniferum HOM05D003625 ORTHO05D004382 4.9e-100 369.4 564 41.0
CSS0005803 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 6.5e-100 369.0 564 40.6
DCAR_002782 Daucus carota HOM05D003625 ORTHO05D004382 6.5e-100 369.0 543 40.5
Peaxi162Scf00006g03621 Petunia axillaris HOM05D003625 ORTHO05D004382 8.4e-100 368.6 588 40.0
SGA_v2.0_scaffold1G00428 Striga asiatica HOM05D003625 ORTHO05D004382 4.2e-99 366.3 554 39.9
HanXRQChr05g0150041 Helianthus annuus HOM05D003625 ORTHO05D004382 5.5e-99 365.9 550 41.6
SalBow3G1663 Salvia bowleyana HOM05D003625 ORTHO05D004382 7.1e-99 365.5 543 40.7
AUR62028969 Chenopodium quinoa HOM05D003625 ORTHO05D004382 1.9e-96 357.5 544 40.4
ECA236G1413 Erigeron canadensis HOM05D003625 ORTHO05D004382 1.9e-96 357.5 552 41.7
MBI19_g35956_MAGBIO Magnolia biondii HOM05D003625 ORTHO05D004382 3.7e-95 353.2 557 40.0
HanXRQChr06g0164001 Helianthus annuus HOM05D003625 ORTHO05D004382 6.2e-95 352.4 549 40.8
HPP92_011331 Vanilla planifolia HOM05D003625 ORTHO05D004382 8.2e-95 352.1 524 40.1
DCAR_005834 Daucus carota HOM05D003625 ORTHO05D004382 1.1e-94 351.7 546 40.1
Lj2A1183G17 Lonicera japonica HOM05D003625 ORTHO05D004382 3.1e-94 350.1 612 39.1
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 2.0e-93 347.4 654 36.4
CiPaw.13G100200 Carya illinoinensis HOM05D003625 ORTHO05D004382 1.0e-89 335.1 389 49.6
CDE05G3415 Ceratophyllum demersum HOM05D003625 ORTHO05D004382 1.3e-89 334.7 552 39.7
SHI14627 Sapria himalayana HOM05D003625 ORTHO05D004382 2.5e-88 330.5 483 41.8
AUR62034443 Chenopodium quinoa HOM05D003625 ORTHO05D004382 1.3e-84 318.2 502 39.0
Psat5g051000 Pisum sativum HOM05D003625 ORTHO05D004382 2.2e-84 317.4 470 41.3
Atru.chr5.1297 Acer truncatum HOM05D003625 ORTHO05D004382 1.0e-81 308.5 361 48.5
Mapoly0033s0004 Marchantia polymorpha HOM05D003625 ORTHO05D004382 5.5e-75 286.2 562 34.3
Lsat_1_v5_gn_5_189721 Lactuca sativa HOM05D003625 ORTHO05D004382 1.6e-74 284.6 559 37.0
FvH4_2g24530 Fragaria vesca HOM05D003625 ORTHO05D004382 6.3e-71 272.7 329 48.6
TPR.G34306 Trifolium pratense HOM05D003625 ORTHO05D004382 9.4e-67 258.8 313 47.9
Pp3c9_3000 Physcomitrium patens HOM05D003625 ORTHO05D004382 9.7e-64 248.8 550 32.0
unitig_0.g1186 Utricularia gibba HOM05D003625 ORTHO05D004382 1.1e-62 245.4 460 37.6
Pp3c15_10800 Physcomitrium patens HOM05D003625 ORTHO05D004382 1.8e-62 244.6 556 31.7
SMO271G0139 Selaginella moellendorffii HOM05D003625 ORTHO05D004382 1.6e-58 231.5 543 30.9
CSS0019256 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 2.7e-53 214.2 274 46.4
AagrBONN_evm.TU.Sc2ySwM_228.4764 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.9e-52 210.7 563 29.3
SEGI_20946 Sequoiadendron giganteum HOM05D003625 ORTHO05D004382 8.5e-52 209.1 356 39.3
Sc17g0003670 Simmondsia chinensis HOM05D003625 ORTHO05D004382 4.2e-51 206.8 289 42.6
TPR.G40473 Trifolium pratense HOM05D003625 ORTHO05D004382 2.8e-47 194.1 254 42.5
Sc17g0003660 Simmondsia chinensis HOM05D003625 ORTHO05D004382 3.8e-44 183.7 236 39.8
Ca_01349_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 1.9e-43 181.4 208 45.7
HanXRQChr12g0370811 Helianthus annuus HOM05D003625 ORTHO05D004382 3.0e-36 157.5 392 32.4
AUR62034492 Chenopodium quinoa HOM05D003625 ORTHO05D004382 1.6e-29 135.2 184 44.6
Ah.04g162700 Amaranthus hybridus HOM05D003625 ORTHO05D004382 4.6e-29 133.7 229 36.7
CSS0039297 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 2.1e-26 124.8 204 38.2
Hma1.2p1_0358F.1_g134790 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 2.9e-23 114.4 229 35.4
SEGI_15323 Sequoiadendron giganteum HOM05D003625 ORTHO05D004382 2.9e-23 114.4 164 40.2
Hma1.2p1_0111F.1_g053430 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 5.4e-22 110.2 178 37.1
Atru.chr5.1298 Acer truncatum HOM05D003625 ORTHO05D004382 7.1e-22 109.8 143 44.1
CBR_g32447 Chara braunii HOM05D003625 ORTHO05D004382 8.1e-18 96.3 162 38.9
QL01p033556 Quercus lobata HOM05D003625 ORTHO05D004382 1.1e-17 95.9 116 47.4
HanXRQChr12g0370771 Helianthus annuus HOM05D003625 ORTHO05D004382 1.8e-17 95.1 197 36.5
QL05p076995 Quercus lobata HOM05D003625 ORTHO05D004382 1.1e-14 85.9 100 49.0
CBR_g32446 Chara braunii HOM05D000019 ORTHO05D000353 6.0e-13 80.1 118 34.7
QL12p023546 Quercus lobata HOM05D003625 ORTHO05D004382 3.9e-12 77.4 168 35.1
QL05p076992 Quercus lobata HOM05D003625 ORTHO05D004382 1.2e-10 72.4 74 54.1
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 8.1e-10 69.7 68 48.5
Os05g0188600 Oryza sativa ssp. japonica HOM05D003625 ORTHO05D004382 8.1e-10 69.7 92 35.9
Hma1.2p1_3245F.1_g334350 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 1.4e-09 68.9 116 39.7
QL12p023490 Quercus lobata HOM05D003625 ORTHO05D004382 1.4e-09 68.9 192 29.2
SEGI_02434 Sequoiadendron giganteum HOM05D003625 ORTHO05D004382 3.1e-09 67.8 93 41.9
AUR62036671 Chenopodium quinoa HOM05D003625 ORTHO05D004382 3.2e-06 57.8 50 54.0
TPR.G8723 Trifolium pratense HOM05D000036 ORTHO05D012241 5.4e-06 57.0 73 43.8


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