Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR238730 Cardamine hirsuta HOM05D000966 ORTHO05D002384 1.2e-151 539.7 253 100.0
AT4G30860 Arabidopsis thaliana HOM05D000966 ORTHO05D002384 1.9e-112 409.5 222 83.8
AL7G21250 Arabidopsis lyrata HOM05D000966 ORTHO05D002384 2.5e-112 409.1 257 74.3
Sp7g28740 Schrenkiella parvula HOM05D000966 ORTHO05D002384 1.8e-110 402.9 257 73.9
Thhalv10025007m.g Eutrema salsugineum HOM05D000966 ORTHO05D002384 2.2e-108 396.0 256 73.0
Carub.0007s0969 Capsella rubella HOM05D000966 ORTHO05D002384 3.3e-104 382.1 222 78.4
BcaB03g12663 Brassica carinata HOM05D000966 ORTHO05D002384 1.2e-101 373.6 225 76.4
BcaC01g01135 Brassica carinata HOM05D000966 ORTHO05D002384 2.2e-100 369.4 256 67.6
A08p19050 Brassica napus HOM05D000966 ORTHO05D002384 2.2e-100 369.4 222 75.7
BolC3t21156H Brassica oleracea HOM05D000966 ORTHO05D002384 6.5e-100 367.9 256 67.2
BraA08t33866Z Brassica rapa HOM05D000966 ORTHO05D002384 1.1e-99 367.1 222 74.8
C03p88480 Brassica napus HOM05D000966 ORTHO05D002384 7.1e-99 364.4 256 66.4
Aa31LG2G19520 Aethionema arabicum HOM05D000966 ORTHO05D002384 7.9e-98 360.9 227 73.6
THA.LOC104819902 Tarenaya hassleriana HOM05D000966 ORTHO05D002384 5.3e-78 295.0 221 61.5
Cfa020771 Carpinus fangiana HOM05D000966 ORTHO05D002384 2.9e-68 262.7 227 54.2
CiPaw.15G163700 Carya illinoinensis HOM05D000966 ORTHO05D002384 4.4e-64 248.8 225 52.0
Prupe.1G101500 Prunus persica HOM05D000966 ORTHO05D002384 2.0e-61 240.0 229 50.7
Gohir.A13G206300 Gossypium hirsutum HOM05D000966 ORTHO05D002384 1.0e-60 237.7 226 51.8
Gohir.D13G210900 Gossypium hirsutum HOM05D000966 ORTHO05D002384 2.2e-60 236.5 223 50.2
Thecc.09G154800 Theobroma cacao HOM05D000966 ORTHO05D002384 2.9e-60 236.1 226 53.1
Duzib168G1082 Durio zibethinus HOM05D000966 ORTHO05D002384 6.5e-60 235.0 225 52.0
MELO3C010193.2 Cucumis melo HOM05D000966 ORTHO05D002384 1.1e-59 234.2 235 47.2
MD16G1258900 Malus domestica HOM05D000966 ORTHO05D002384 1.5e-59 233.8 227 49.3
ClCG06G012700 Citrullus lanatus HOM05D000966 ORTHO05D002384 1.9e-59 233.4 232 48.7
Gorai.013G240900 Gossypium raimondii HOM05D000966 ORTHO05D002384 1.9e-59 233.4 223 49.8
COL.COLO4_36568 Corchorus olitorius HOM05D000966 ORTHO05D002384 3.2e-59 232.6 226 50.9
Atru.chr7.388 Acer truncatum HOM05D000966 ORTHO05D002384 1.2e-58 230.7 224 49.1
QL02p094348 Quercus lobata HOM05D000966 ORTHO05D002384 1.8e-57 226.9 233 45.9
Potri.018G102100 Populus trichocarpa HOM05D000966 ORTHO05D002384 3.0e-57 226.1 236 45.8
Sed0005530 Sechium edule HOM05D000966 ORTHO05D002384 8.8e-57 224.6 225 46.2
Ciclev10008144m.g Citrus clementina HOM05D000966 ORTHO05D002384 1.3e-55 220.7 223 49.8
FAN12G1904 Fragaria x ananassa HOM05D000966 ORTHO05D002384 2.2e-55 219.9 226 48.7
CsaV3_1G029250 Cucumis sativus L. HOM05D000966 ORTHO05D002384 2.8e-55 219.5 238 45.8
FvH4_4g08820 Fragaria vesca HOM05D000966 ORTHO05D002384 3.7e-55 219.2 224 49.1
Manes.14G113800 Manihot esculenta HOM05D000966 ORTHO05D002384 3.1e-54 216.1 185 51.9
FAN07G0432 Fragaria x ananassa HOM05D000966 ORTHO05D002384 1.2e-53 214.2 224 48.7
FAN17G0011 Fragaria x ananassa HOM05D000966 ORTHO05D002384 1.0e-52 211.1 223 48.4
CANSAT11G0969 Cannabis sativa HOM05D000966 ORTHO05D002384 3.8e-52 209.1 225 46.7
Cpa.g.sc199.9 Carica papaya HOM05D000966 ORTHO05D002384 5.5e-51 205.3 127 66.1
CSS0013550 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D002384 9.5e-51 204.5 243 41.6
GSVIVG01023699001 Vitis vinifera HOM05D000966 ORTHO05D002384 9.5e-51 204.5 229 42.4
Dinv41333 Davidia involucrata HOM05D000966 ORTHO05D002384 1.2e-50 204.1 234 44.0
RcHm_v2.0_Chr4g0405361 Rosa chinensis HOM05D000966 ORTHO05D002384 2.1e-50 203.4 222 44.6
CSS0008046 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D002384 2.8e-50 203.0 243 41.2
Nn8g40137 Nelumbo nucifera HOM05D000966 ORTHO05D002384 8.0e-50 201.4 151 55.0
PSO063G2137 Papaver somniferum HOM05D000966 ORTHO05D002384 4.0e-49 199.1 245 42.4
TWI32G0919 Tripterygium wilfordii HOM05D000966 ORTHO05D002384 4.0e-49 199.1 220 42.7
Sabra18G0087800 Salix brachista HOM05D000966 ORTHO05D002384 4.9e-47 192.2 293 36.9
EL10Ac8g18900 Beta vulgaris HOM05D000966 ORTHO05D002384 8.3e-47 191.4 140 52.9
Eucgr.C01233 Eucalyptus grandis HOM05D000966 ORTHO05D002384 1.1e-46 191.0 177 49.7
PSO782G3854 Papaver somniferum HOM05D000966 ORTHO05D002384 1.1e-46 191.0 244 41.4
arahy.Tifrunner.gnm1.ann1.BQLE9W Arachis hypogaea HOM05D000966 ORTHO05D002384 1.6e-45 187.2 232 42.7
TWI34G0436 Tripterygium wilfordii HOM05D000966 ORTHO05D002384 2.0e-45 186.8 220 40.0
Ah.09g228570 Amaranthus hybridus HOM05D000966 ORTHO05D002384 1.3e-44 184.1 240 39.2
MBI15_g07483_MAGBIO Magnolia biondii HOM05D000966 ORTHO05D002384 1.5e-43 180.6 145 51.7
vmacro13070 Vaccinium macrocarpon HOM05D000966 ORTHO05D002384 1.9e-43 180.3 177 42.4
MSTRG.6166 Avicennia marina HOM05D000966 ORTHO05D002384 3.3e-43 179.5 199 43.2
AUR62028372 Chenopodium quinoa HOM05D000966 ORTHO05D002384 3.3e-43 179.5 130 52.3
Sopen07g002180 Solanum pennellii HOM05D000966 ORTHO05D002384 4.3e-43 179.1 157 42.7
Solyc07g006050.3 Solanum lycopersicum HOM05D000966 ORTHO05D002384 5.6e-43 178.7 156 43.6
PGSC0003DMG401011157 Solanum tuberosum HOM05D000966 ORTHO05D002384 1.6e-42 177.2 156 42.9
PGR102G3031 Punica granatum HOM05D000966 ORTHO05D002384 3.6e-42 176.0 172 47.1
Duzib187G0743 Durio zibethinus HOM05D000966 ORTHO05D002384 4.7e-42 175.6 122 62.3
CAN.G1190.17 Capsicum annuum HOM05D000966 ORTHO05D002384 1.0e-41 174.5 177 42.9
Lj6g0021714 Lotus japonicus HOM05D000966 ORTHO05D002384 6.8e-41 171.8 230 42.6
Cc06_g14440 Coffea canephora HOM05D000966 ORTHO05D002384 8.9e-41 171.4 137 52.6
arahy.Tifrunner.gnm1.ann1.XD33H1 Arachis hypogaea HOM05D000966 ORTHO05D002384 3.4e-40 169.5 256 37.5
Sc14g0001010 Simmondsia chinensis HOM05D000966 ORTHO05D002384 3.4e-40 169.5 133 51.1
Glyma.06G223300 Glycine max HOM05D000966 ORTHO05D002384 1.3e-39 167.5 230 40.9
Lalb_Chr11g0072461 Lupinus albus HOM05D000966 ORTHO05D002384 2.9e-39 166.4 169 46.7
ATR0580G159 Amborella trichopoda HOM05D000966 ORTHO05D002384 7.0e-38 161.8 153 43.8
Phvul.001G083533 Phaseolus vulgaris HOM05D000966 ORTHO05D002384 7.0e-38 161.8 113 55.8
Phvul.001G083666 Phaseolus vulgaris HOM05D000966 ORTHO05D002384 7.0e-38 161.8 113 55.8
Phvul.009G195400 Phaseolus vulgaris HOM05D000966 ORTHO05D002384 7.0e-38 161.8 148 47.3
Psat1g023240 Pisum sativum HOM05D000966 ORTHO05D002384 9.2e-38 161.4 114 58.8
CDE02G0098 Ceratophyllum demersum HOM05D000966 ORTHO05D002384 2.0e-37 160.2 137 48.2
Hma1.2p1_0028F.1_g017810 Hydrangea macrophylla HOM05D000966 ORTHO05D002384 6.0e-37 158.7 230 37.4
Zm00001eb184480 Zea mays HOM05D000966 ORTHO05D002384 7.8e-37 158.3 139 47.5
Aqoxy7G03278 Aquilegia oxysepala HOM05D000966 ORTHO05D002384 1.7e-36 157.1 138 47.8
HanXRQChr03g0066001 Helianthus annuus HOM05D000966 ORTHO05D002384 2.3e-36 156.8 135 45.2
VMungo1309G2426 Vigna mungo HOM05D000966 ORTHO05D002384 3.9e-36 156.0 113 54.9
Os02g0611300 Oryza sativa ssp. japonica HOM05D000966 ORTHO05D002384 5.0e-36 155.6 157 43.3
TPR.G14496 Trifolium pratense HOM05D000966 ORTHO05D002384 5.0e-36 155.6 124 54.0
Lsat_1_v5_gn_7_50901 Lactuca sativa HOM05D000966 ORTHO05D002384 1.5e-35 154.1 222 37.8
TAR383G0488 Trochodendron aralioides HOM05D000966 ORTHO05D002384 1.9e-35 153.7 103 56.3
Haze_19110 Corylus avellana HOM05D000966 ORTHO05D002384 9.5e-35 151.4 159 50.3
HanXRQChr12g0357821 Helianthus annuus HOM05D000966 ORTHO05D002384 6.2e-34 148.7 192 36.5
Oeu010275.1 Olea europaea HOM05D000966 ORTHO05D002384 2.3e-33 146.7 123 48.8
ECA240G3489 Erigeron canadensis HOM05D000966 ORTHO05D002384 4.4e-32 142.5 154 42.9
SEGI_18174 Sequoiadendron giganteum HOM05D000966 ORTHO05D002384 4.4e-32 142.5 151 40.4
DCAR_014798 Daucus carota HOM05D000966 ORTHO05D002384 7.5e-32 141.7 120 48.3
ECA240G2206 Erigeron canadensis HOM05D000966 ORTHO05D002384 1.4e-30 137.5 148 39.9
Lj9C723G5 Lonicera japonica HOM05D000966 ORTHO05D002384 5.4e-30 135.6 226 33.6
SHI02830 Sapria himalayana HOM05D000966 ORTHO05D002384 7.0e-30 135.2 117 47.0
Medtr0071s0100 Medicago truncatula HOM05D000966 ORTHO05D002384 1.3e-28 131.0 105 51.4
SGA_v2.0_scaffold265G46072 Striga asiatica HOM05D000966 ORTHO05D002384 3.9e-28 129.4 151 39.1
Nitab4.5_0002809g0080 Nicotiana tabacum HOM05D000966 ORTHO05D002384 1.6e-26 124.0 172 34.3
DCAR_017928 Daucus carota HOM05D000966 ORTHO05D002384 4.0e-25 119.4 116 45.7
Rhsim01G0021300 Rhododendron simsii HOM05D000966 ORTHO05D002384 1.7e-23 114.0 225 30.2
HanXRQChr12g0357931 Helianthus annuus HOM05D000966 ORTHO05D002384 4.9e-23 112.5 98 45.9
Actinidia33610 Actinidia chinensis HOM05D000966 ORTHO05D002384 3.0e-20 103.2 96 42.7
Nitab4.5_0001036g0020 Nicotiana tabacum HOM05D000966 ORTHO05D002384 1.1e-19 101.3 180 28.9
Mapoly0045s0061 Marchantia polymorpha HOM05D000966 ORTHO05D002384 1.7e-15 87.4 105 35.2
Pp3c2_35860 Physcomitrium patens HOM05D000966 ORTHO05D002384 7.8e-13 78.6 108 34.3
SEGI_23432 Sequoiadendron giganteum HOM05D000966 ORTHO05D002384 1.0e-12 78.2 95 37.9
Glyma.18G302200 Glycine max HOM05D000966 ORTHO05D002384 2.3e-12 77.0 62 48.4
Glyma.08G000100 Glycine max HOM05D000142 ORTHO05D000124 3.9e-12 76.3 174 33.3
AUR62025379 Chenopodium quinoa HOM05D000966 ORTHO05D002384 2.1e-10 70.5 55 49.1
CBR_g41442 Chara braunii HOM05D000966 ORTHO05D002384 1.4e-09 67.8 115 33.9
Zm00001eb349090 Zea mays HOM05D000706 ORTHO05D001554 6.4e-07 58.9 68 39.7
EL10Ac6g14021 Beta vulgaris HOM05D000706 ORTHO05D001554 1.4e-06 57.8 94 35.1
TPR.G37369 Trifolium pratense HOM05D000706 ORTHO05D001554 9.3e-06 55.1 71 35.2


User provided reference genes

Program Settings