Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR202060 Cardamine hirsuta HOM05D003829 ORTHO05D116213 8.6e-60 233.4 115 100.0
Sp6g28120 Schrenkiella parvula HOM05D003829 ORTHO05D004943 1.3e-28 129.8 66 93.9
A10p23060 Brassica napus HOM05D003829 ORTHO05D004943 3.0e-28 128.6 66 93.9
C09p61050 Brassica napus HOM05D003829 ORTHO05D004943 3.0e-28 128.6 66 93.9
BraA10t44375Z Brassica rapa HOM05D003829 ORTHO05D004943 3.0e-28 128.6 66 93.9
BolC9t58950H Brassica oleracea HOM05D003829 ORTHO05D004943 3.9e-28 128.3 66 92.4
Thhalv10007156m.g Eutrema salsugineum HOM05D003829 ORTHO05D004943 5.1e-28 127.9 66 90.9
BcaC04g18917 Brassica carinata HOM05D003829 ORTHO05D004943 3.3e-27 125.2 66 92.4
Aa31LG11G13610 Aethionema arabicum HOM05D003829 ORTHO05D004943 4.3e-27 124.8 66 89.4
AT1G72550 Arabidopsis thaliana HOM05D003829 ORTHO05D004943 1.3e-26 123.2 66 87.9
THA.LOC104820955 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 2.8e-26 122.1 66 86.4
AL2G32240 Arabidopsis lyrata HOM05D003829 ORTHO05D004943 3.7e-26 121.7 66 86.4
Cpa.g.sc271.5 Carica papaya HOM05D003829 ORTHO05D004943 3.7e-26 121.7 66 86.4
THA.LOC104806554 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 3.7e-26 121.7 66 86.4
BcaB08g36877 Brassica carinata HOM05D003829 ORTHO05D004943 6.3e-26 120.9 62 91.9
Atru.chr10.875 Acer truncatum HOM05D003829 ORTHO05D004943 1.4e-25 119.8 68 80.9
Carub.0002s1941 Capsella rubella HOM05D003829 ORTHO05D004943 1.8e-25 119.4 66 83.3
CARHR065490 Cardamine hirsuta HOM05D003829 ORTHO05D004943 2.4e-25 119.0 66 84.8
Sabra13G0059400 Salix brachista HOM05D003829 ORTHO05D004943 4.1e-25 118.2 66 83.3
Lj4C813G7 Lonicera japonica HOM05D003829 ORTHO05D004943 6.9e-25 117.5 66 81.8
GSVIVG01008188001 Vitis vinifera HOM05D003829 ORTHO05D004943 6.9e-25 117.5 66 81.8
EL10Ac6g14132 Beta vulgaris HOM05D003829 ORTHO05D004943 9.0e-25 117.1 66 81.8
Peaxi162Scf00153g00217 Petunia axillaris HOM05D003829 ORTHO05D004943 9.0e-25 117.1 66 80.3
Hund27361 Selenicereus undatus HOM05D003829 ORTHO05D004943 9.0e-25 117.1 66 81.8
Solyc01g008310.4 Solanum lycopersicum HOM05D003829 ORTHO05D004943 9.0e-25 117.1 66 80.3
SGA_v2.0_scaffold116G32207 Striga asiatica HOM05D003829 ORTHO05D004943 1.2e-24 116.7 66 80.3
ATR0789G018 Amborella trichopoda HOM05D003829 ORTHO05D004943 1.5e-24 116.3 66 80.3
Ciclev10014690m.g Citrus clementina HOM05D003829 ORTHO05D004943 1.5e-24 116.3 68 80.9
COL.COLO4_28877 Corchorus olitorius HOM05D003829 ORTHO05D004943 1.5e-24 116.3 82 69.5
CAN.G282.43 Capsicum annuum HOM05D003829 ORTHO05D004943 2.0e-24 115.9 66 78.8
Dinv38617 Davidia involucrata HOM05D003829 ORTHO05D004943 2.0e-24 115.9 70 75.7
Nitab4.5_0006274g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 2.0e-24 115.9 66 78.8
Sed0025371 Sechium edule HOM05D003829 ORTHO05D004943 2.0e-24 115.9 66 81.8
Sopen01g003830 Solanum pennellii HOM05D003829 ORTHO05D004943 2.0e-24 115.9 66 78.8
SGA_v2.0_scaffold127G34045 Striga asiatica HOM05D003829 ORTHO05D004943 2.0e-24 115.9 66 78.8
Duzib084G0834 Durio zibethinus HOM05D003829 ORTHO05D004943 2.6e-24 115.5 68 77.9
Gohir.A12G270300 Gossypium hirsutum HOM05D003829 ORTHO05D004943 2.6e-24 115.5 66 80.3
Gohir.D12G270700 Gossypium hirsutum HOM05D003829 ORTHO05D004943 2.6e-24 115.5 66 80.3
MSTRG.22458 Avicennia marina HOM05D003829 ORTHO05D004943 3.4e-24 115.2 66 80.3
CSS0022273 Camellia sinensis var. sinensis HOM05D003829 ORTHO05D004943 3.4e-24 115.2 66 78.8
Nn6g34733 Nelumbo nucifera HOM05D003829 ORTHO05D004943 3.4e-24 115.2 66 80.3
Potri.018G070200 Populus trichocarpa HOM05D003829 ORTHO05D004943 3.4e-24 115.2 66 80.3
Thecc.03G060100 Theobroma cacao HOM05D003829 ORTHO05D004943 3.4e-24 115.2 68 77.9
HPP92_012745 Vanilla planifolia HOM05D003829 ORTHO05D004943 3.4e-24 115.2 66 77.3
HPP92_013144 Vanilla planifolia HOM05D003829 ORTHO05D004943 3.4e-24 115.2 66 77.3
HPP92_013145 Vanilla planifolia HOM05D003829 ORTHO05D004943 3.4e-24 115.2 66 77.3
Ah.03g138770 Amaranthus hybridus HOM05D003829 ORTHO05D004943 4.5e-24 114.8 66 78.8
CANSAT80G2907 Cannabis sativa HOM05D003829 ORTHO05D004943 4.5e-24 114.8 66 80.3
COL.COLO4_30269 Corchorus olitorius HOM05D003829 ORTHO05D004943 4.5e-24 114.8 76 71.1
CiPaw.04G139300 Carya illinoinensis HOM05D003829 ORTHO05D004943 5.9e-24 114.4 66 80.3
Migut.L00155 Erythranthe guttata HOM05D003829 ORTHO05D004943 5.9e-24 114.4 66 75.8
Migut.M00517 Erythranthe guttata HOM05D003829 ORTHO05D004943 5.9e-24 114.4 66 75.8
Migut.N03353 Erythranthe guttata HOM05D003829 ORTHO05D004943 5.9e-24 114.4 66 75.8
Migut.O00831 Erythranthe guttata HOM05D003829 ORTHO05D004943 5.9e-24 114.4 66 75.8
Nn3g17616 Nelumbo nucifera HOM05D003829 ORTHO05D004943 5.9e-24 114.4 66 78.8
PGR119G2172 Punica granatum HOM05D003829 ORTHO05D004943 5.9e-24 114.4 66 78.8
Gorai.008G291100 Gossypium raimondii HOM05D003829 ORTHO05D004943 7.6e-24 114.0 66 78.8
MD06G1208000 Malus domestica HOM05D003829 ORTHO05D004943 7.6e-24 114.0 66 80.3
MD14G1218400 Malus domestica HOM05D003829 ORTHO05D004943 7.6e-24 114.0 66 80.3
PSO676G0009 Papaver somniferum HOM05D003829 ORTHO05D004943 7.6e-24 114.0 66 78.8
Prupe.5G212200 Prunus persica HOM05D003829 ORTHO05D004943 7.6e-24 114.0 66 80.3
QL10p021913 Quercus lobata HOM05D003829 ORTHO05D004943 7.6e-24 114.0 66 80.3
Sc12g0007010 Simmondsia chinensis HOM05D003829 ORTHO05D004943 7.6e-24 114.0 66 78.8
ClCG06G015260 Citrullus lanatus HOM05D003829 ORTHO05D004943 1.0e-23 113.6 66 81.8
TAR622G1091 Trochodendron aralioides HOM05D003829 ORTHO05D004943 1.0e-23 113.6 66 78.8
AUR62008644 Chenopodium quinoa HOM05D003829 ORTHO05D004943 1.3e-23 113.2 66 78.8
Hma1.2p1_0744F.1_g211650 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 1.3e-23 113.2 66 77.3
Potri.013G068100 Populus trichocarpa HOM05D003829 ORTHO05D004943 1.3e-23 113.2 66 80.3
TWI73G0611 Tripterygium wilfordii HOM05D003829 ORTHO05D004943 1.3e-23 113.2 66 78.8
unitig_60.g25860 Utricularia gibba HOM05D003829 ORTHO05D004943 1.3e-23 113.2 66 77.3
Actinidia18960 Actinidia chinensis HOM05D003829 ORTHO05D004943 1.7e-23 112.8 66 75.8
Actinidia35063 Actinidia chinensis HOM05D003829 ORTHO05D004943 1.7e-23 112.8 66 78.8
CiPaw.16G081500 Carya illinoinensis HOM05D003829 ORTHO05D004943 1.7e-23 112.8 65 81.5
DCAR_011621 Daucus carota HOM05D003829 ORTHO05D004943 1.7e-23 112.8 63 82.5
RcHm_v2.0_Chr7g0184111 Rosa chinensis HOM05D003829 ORTHO05D004943 1.7e-23 112.8 68 75.0
CDE10G0816 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 2.2e-23 112.5 66 77.3
CsaV3_1G003150 Cucumis sativus L. HOM05D003829 ORTHO05D004943 2.2e-23 112.5 66 80.3
Zm00001eb267900 Zea mays HOM05D003829 ORTHO05D004943 2.2e-23 112.5 66 77.3
arahy.Tifrunner.gnm1.ann1.03AHKF Arachis hypogaea HOM05D003829 ORTHO05D004943 2.9e-23 112.1 66 77.3
arahy.Tifrunner.gnm1.ann1.WM1R7K Arachis hypogaea HOM05D003829 ORTHO05D004943 2.9e-23 112.1 66 77.3
Medtr5g077610 Medicago truncatula HOM05D003829 ORTHO05D004943 3.8e-23 111.7 66 78.8
SalBow6G2606 Salvia bowleyana HOM05D003829 ORTHO05D004943 3.8e-23 111.7 66 75.8
unitig_0.g846 Utricularia gibba HOM05D003829 ORTHO05D004943 3.8e-23 111.7 66 75.8
Cfa021591 Carpinus fangiana HOM05D003829 ORTHO05D004943 5.0e-23 111.3 66 78.8
CiPaw.15G121900 Carya illinoinensis HOM05D003829 ORTHO05D004943 5.0e-23 111.3 66 78.8
MELO3C017266.2 Cucumis melo HOM05D003829 ORTHO05D004943 5.0e-23 111.3 66 78.8
PSO384G2719 Papaver somniferum HOM05D003829 ORTHO05D004943 5.0e-23 111.3 66 77.3
vmacro21052 Vaccinium macrocarpon HOM05D003829 ORTHO05D004943 5.0e-23 111.3 66 77.3
FvH4_5g13020 Fragaria vesca HOM05D003829 ORTHO05D004943 6.5e-23 110.9 68 73.5
FAN08G2534 Fragaria x ananassa HOM05D003829 ORTHO05D004943 6.5e-23 110.9 68 73.5
FAN13G0156 Fragaria x ananassa HOM05D003829 ORTHO05D004943 6.5e-23 110.9 68 73.5
Prupe.5G041000 Prunus persica HOM05D003829 ORTHO05D004943 6.5e-23 110.9 66 77.3
QL10p029183 Quercus lobata HOM05D003829 ORTHO05D004943 6.5e-23 110.9 66 77.3
Aqoxy1G02793 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 8.4e-23 110.5 66 77.3
Eucgr.B02012 Eucalyptus grandis HOM05D003829 ORTHO05D004943 8.4e-23 110.5 66 75.8
Manes.06G055300 Manihot esculenta HOM05D003829 ORTHO05D004943 8.4e-23 110.5 69 75.4
Medtr4g112680 Medicago truncatula HOM05D003829 ORTHO05D004943 8.4e-23 110.5 66 77.3
Pp3c19_13120 Physcomitrium patens HOM05D003829 ORTHO05D004943 8.4e-23 110.5 66 78.8
Psat4g043920 Pisum sativum HOM05D003829 ORTHO05D004943 8.4e-23 110.5 66 77.3
TPR.G23867 Trifolium pratense HOM05D003829 ORTHO05D004943 8.4e-23 110.5 66 77.3
Os05g0558900 Oryza sativa ssp. japonica HOM05D003829 ORTHO05D004943 1.1e-22 110.2 66 74.2
AagrBONN_evm.TU.Sc2ySwM_199.43 Anthoceros agrestis HOM05D003829 ORTHO05D004943 1.4e-22 109.8 66 74.2
Aqoxy6G02137 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 1.4e-22 109.8 66 75.8
Mapoly0013s0023 Marchantia polymorpha HOM05D003829 ORTHO05D004943 1.4e-22 109.8 66 75.8
AUR62014243 Chenopodium quinoa HOM05D003829 ORTHO05D004943 1.9e-22 109.4 66 75.8
Ca_21737_v3 Cicer arietinum L. HOM05D003829 ORTHO05D004943 1.9e-22 109.4 66 75.8
FAN18G1085 Fragaria x ananassa HOM05D003829 ORTHO05D004943 1.9e-22 109.4 68 72.1
PSO339G3234 Papaver somniferum HOM05D003829 ORTHO05D004943 1.9e-22 109.4 66 80.3
Nitab4.5_0021995g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 2.5e-22 109.0 62 77.4
Nitab4.5_0023629g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 2.5e-22 109.0 62 77.4
Lj4g0017423 Lotus japonicus HOM05D003829 ORTHO05D004943 3.2e-22 108.6 66 74.2
Glyma.05G016400 Glycine max HOM05D003829 ORTHO05D004943 4.2e-22 108.2 66 74.2
Phvul.003G180700 Phaseolus vulgaris HOM05D003829 ORTHO05D004943 4.2e-22 108.2 66 75.8
AagrBONN_evm.TU.Sc2ySwM_368.2791 Anthoceros agrestis HOM05D003829 ORTHO05D004943 5.5e-22 107.8 66 74.2
Lalb_Chr12g0197451 Lupinus albus HOM05D003829 ORTHO05D004943 5.5e-22 107.8 66 74.2
Pp3c22_15340 Physcomitrium patens HOM05D003829 ORTHO05D004943 7.2e-22 107.5 66 74.2
Cc00_g04570 Coffea canephora HOM05D003829 ORTHO05D004943 9.3e-22 107.1 66 72.7
Glyma.17G083700 Glycine max HOM05D003829 ORTHO05D004943 9.3e-22 107.1 66 74.2
VMungo1215G2863 Vigna mungo HOM05D003829 ORTHO05D004943 9.3e-22 107.1 66 74.2
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 1.2e-21 106.7 66 74.2
HanXRQChr03g0078721 Helianthus annuus HOM05D003829 ORTHO05D004943 1.2e-21 106.7 66 72.7
HanXRQChr09g0270121 Helianthus annuus HOM05D003829 ORTHO05D004943 1.2e-21 106.7 66 72.7
Lsat_1_v5_gn_1_11920 Lactuca sativa HOM05D003829 ORTHO05D004943 1.2e-21 106.7 66 72.7
SMO351G0192 Selaginella moellendorffii HOM05D003829 ORTHO05D004943 2.1e-21 105.9 66 72.7
CBR_g49053 Chara braunii HOM05D003829 ORTHO05D004943 2.7e-21 105.5 66 77.3
CDE10G0520 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 5.1e-20 101.3 68 73.5
MCO09G827 Micromonas commoda HOM05D003829 ORTHO05D004943 1.4e-17 93.2 66 65.2
HPP92_013183 Vanilla planifolia HOM05D003829 ORTHO05D004943 5.3e-17 91.3 53 73.6
Oeu037756.2 Olea europaea HOM05D003829 ORTHO05D004943 6.9e-17 90.9 68 63.2
Cre13.g603900 Chlamydomonas reinhardtii HOM05D003829 ORTHO05D004943 1.3e-15 86.7 67 62.7
Cfa026018 Carpinus fangiana HOM05D003829 ORTHO05D004943 2.2e-15 85.9 66 59.1
PRCOL_00001438 Prasinoderma coloniale HOM05D003829 ORTHO05D004943 1.0e-12 77.0 70 55.7
Duzib205G0197 Durio zibethinus HOM05D003829 ORTHO05D004943 1.8e-12 76.3 68 54.4
Atru.chr11.247 Acer truncatum HOM05D003829 ORTHO05D004943 9.7e-11 70.5 41 78.0
Haze_26625 Corylus avellana HOM05D003829 ORTHO05D004943 1.7e-10 69.7 70 48.6
Eucgr.B00970 Eucalyptus grandis HOM05D003829 ORTHO05D004943 2.4e-09 65.9 40 75.0
SEGI_15169 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 4.1e-09 65.1 37 78.4
Rhsim01G0138800 Rhododendron simsii HOM05D003829 ORTHO05D004943 1.4e-06 56.6 133 31.6
Lsat_1_v5_gn_1_100681 Lactuca sativa HOM05D003829 ORTHO05D228871 9.4e-06 53.9 46 60.9


User provided reference genes

Program Settings