Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR178010 Cardamine hirsuta HOM05D000888 ORTHO05D011624 1.1e-110 403.3 199 100.0
AT2G24690 Arabidopsis thaliana HOM05D000888 ORTHO05D011624 1.7e-79 299.7 213 71.8
CARHR117170 Cardamine hirsuta HOM05D000888 ORTHO05D011624 3.9e-76 288.5 212 72.6
Thhalv10000010m.g Eutrema salsugineum HOM05D000888 ORTHO05D011624 1.8e-73 279.6 212 70.3
Carub.0004s0411 Capsella rubella HOM05D000888 ORTHO05D011624 2.6e-72 275.8 213 69.0
BcaC01g04888 Brassica carinata HOM05D000888 ORTHO05D011624 5.3e-65 251.5 212 65.6
C03p32620 Brassica napus HOM05D000888 ORTHO05D011624 5.3e-65 251.5 212 65.6
BolC3t15600H Brassica oleracea HOM05D000888 ORTHO05D011624 5.3e-65 251.5 212 65.6
A03p27150 Brassica napus HOM05D000888 ORTHO05D011624 5.5e-62 241.5 212 64.2
BcaB01g02996 Brassica carinata HOM05D000888 ORTHO05D011624 1.8e-57 226.5 212 60.4
Sp4g03640 Schrenkiella parvula HOM05D000888 ORTHO05D011624 7.2e-54 214.5 412 36.9
Carub.0004s0409 Capsella rubella HOM05D000888 ORTHO05D000740 1.0e-44 184.1 192 54.7
CARHR117160 Cardamine hirsuta HOM05D000888 ORTHO05D011624 2.8e-42 176.0 156 62.8
CARHR117190 Cardamine hirsuta HOM05D000888 ORTHO05D000740 4.8e-42 175.3 192 52.6
AT2G24680 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 2.7e-40 169.5 194 52.1
AL4G15370 Arabidopsis lyrata HOM05D000888 ORTHO05D011624 1.7e-39 166.8 155 60.6
BraA03t11929Z Brassica rapa HOM05D000888 ORTHO05D011624 2.9e-39 166.0 212 50.0
AL4G15350 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 3.8e-39 165.6 218 46.8
Carub.0004s0408 Capsella rubella HOM05D000888 ORTHO05D011624 5.0e-39 165.2 187 49.2
Thhalv10000097m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 2.5e-38 162.9 197 51.8
AL4G15330 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 2.7e-37 159.5 188 46.8
AT2G24650 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 2.3e-36 156.4 188 46.8
BolC4t26977H Brassica oleracea HOM05D000888 ORTHO05D011624 5.2e-36 155.2 188 46.3
Thhalv10000028m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 1.5e-35 153.7 187 48.1
BraA09t41009Z Brassica rapa HOM05D000888 ORTHO05D000740 2.6e-35 152.9 189 48.1
BcaC07g40916 Brassica carinata HOM05D000888 ORTHO05D011624 4.4e-35 152.1 183 45.9
Carub.0004s0406 Capsella rubella HOM05D000888 ORTHO05D000740 7.5e-35 151.4 212 42.0
A04p19030 Brassica napus HOM05D000888 ORTHO05D011624 9.8e-35 151.0 188 45.7
BraA04t17502Z Brassica rapa HOM05D000888 ORTHO05D011624 9.8e-35 151.0 188 45.7
AT2G24681 Arabidopsis thaliana HOM05D000888 ORTHO05D011624 2.2e-34 149.8 194 46.9
BraA09t41014Z Brassica rapa HOM05D002682 ORTHO05D002878 1.1e-33 147.5 183 44.8
BolC4t26979H Brassica oleracea HOM05D000888 ORTHO05D011624 2.4e-33 146.4 188 44.7
BcaB06g27991 Brassica carinata HOM05D000888 ORTHO05D000740 3.1e-33 146.0 188 43.6
CARHR117270 Cardamine hirsuta HOM05D000888 ORTHO05D011624 7.0e-33 144.8 187 43.3
BcaB01g02993 Brassica carinata HOM05D000888 ORTHO05D011624 9.1e-33 144.4 187 43.9
Thhalv10029137m.g Eutrema salsugineum HOM05D000888 ORTHO05D011624 1.2e-32 144.1 212 42.9
BcaB01g02994 Brassica carinata HOM05D000888 ORTHO05D011624 1.6e-32 143.7 211 40.8
BcaC02g08430 Brassica carinata HOM05D000888 ORTHO05D011624 3.5e-32 142.5 188 43.6
C04p54320 Brassica napus HOM05D000888 ORTHO05D000740 3.5e-32 142.5 188 43.6
AL4G15380 Arabidopsis lyrata HOM05D000888 ORTHO05D011624 5.9e-32 141.7 194 42.8
BcaC07g40911 Brassica carinata HOM05D000888 ORTHO05D011624 1.3e-31 140.6 188 45.2
A09p56140 Brassica napus HOM05D000888 ORTHO05D000740 3.8e-31 139.0 186 43.0
BraA09t41010Z Brassica rapa HOM05D000888 ORTHO05D000740 3.8e-31 139.0 186 43.0
C08p39110 Brassica napus HOM05D000888 ORTHO05D000740 2.5e-30 136.3 186 41.4
BolC8t51484H Brassica oleracea HOM05D000888 ORTHO05D000740 2.5e-30 136.3 186 41.4
Sp4g03670 Schrenkiella parvula HOM05D000888 ORTHO05D000740 8.8e-28 127.9 213 39.0
AT2G24696 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 2.0e-27 126.7 213 39.4
C08p39150 Brassica napus HOM05D000888 ORTHO05D002878 3.4e-27 125.9 192 41.1
BolC8t51488H Brassica oleracea HOM05D000888 ORTHO05D002878 3.4e-27 125.9 192 41.1
A03p26970 Brassica napus HOM05D000888 ORTHO05D000740 5.7e-27 125.2 213 37.6
C03p32350 Brassica napus HOM05D000888 ORTHO05D000740 5.7e-27 125.2 213 37.6
BolC3t15577H Brassica oleracea HOM05D000888 ORTHO05D000740 5.7e-27 125.2 213 37.6
BraA03t11908Z Brassica rapa HOM05D000888 ORTHO05D000740 5.7e-27 125.2 213 37.6
AL4G15400 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 1.7e-26 123.6 185 41.1
BcaB01g02997 Brassica carinata HOM05D000888 ORTHO05D000740 1.7e-26 123.6 213 37.1
Carub.0004s0415 Capsella rubella HOM05D000888 ORTHO05D000740 2.2e-26 123.2 213 36.2
Thhalv10000279m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 1.8e-25 120.2 213 36.2
BcaC02g08431 Brassica carinata HOM05D000888 ORTHO05D000740 3.1e-25 119.4 190 38.9
A09p56180 Brassica napus HOM05D002682 ORTHO05D002878 1.0e-23 114.4 192 38.5
CARHR117150 Cardamine hirsuta HOM05D000888 ORTHO05D000740 3.6e-21 105.9 183 35.5
Sp7g29510 Schrenkiella parvula HOM05D000888 ORTHO05D000740 6.1e-21 105.1 214 32.2
BcaC05g26397 Brassica carinata HOM05D000888 ORTHO05D000740 8.0e-21 104.8 180 40.6
C04p54310 Brassica napus HOM05D000888 ORTHO05D000740 1.0e-20 104.4 189 38.1
Sp1g22120 Schrenkiella parvula HOM05D000888 ORTHO05D000740 6.8e-20 101.7 196 34.2
CARHR239590 Cardamine hirsuta HOM05D000888 ORTHO05D000740 1.2e-19 100.9 230 33.5
A04p19040 Brassica napus HOM05D000888 ORTHO05D000740 1.3e-18 97.4 190 35.3
BraA04t17501Z Brassica rapa HOM05D000888 ORTHO05D000740 1.7e-18 97.1 190 35.8
Thhalv10000579m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 1.7e-18 97.1 194 35.1
AL1G39030 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 2.9e-18 96.3 196 34.7
C05p24310 Brassica napus HOM05D000888 ORTHO05D000740 1.4e-17 94.0 199 36.2
BolC5t31165H Brassica oleracea HOM05D000888 ORTHO05D000740 2.4e-17 93.2 199 36.2
A09p40100 Brassica napus HOM05D000888 ORTHO05D000740 7.0e-17 91.7 201 34.8
BcaB03g12713 Brassica carinata HOM05D000888 ORTHO05D000740 9.2e-17 91.3 216 29.6
BcaC06g35129 Brassica carinata HOM05D000888 ORTHO05D000740 2.0e-16 90.1 189 33.9
AT1G26680 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 3.5e-16 89.4 201 33.8
BcaC05g26398 Brassica carinata HOM05D000888 ORTHO05D000740 1.0e-15 87.8 203 33.5
Sp4g03720 Schrenkiella parvula HOM05D000888 ORTHO05D000740 1.3e-15 87.4 218 31.2
Carub.0007s0886 Capsella rubella HOM05D000888 ORTHO05D000740 1.7e-15 87.0 214 32.7
Thhalv10028050m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 3.0e-15 86.3 220 30.5
A03p17770 Brassica napus HOM05D000888 ORTHO05D000740 3.9e-15 85.9 186 32.3
BraA03t11041Z Brassica rapa HOM05D000888 ORTHO05D000740 3.9e-15 85.9 186 32.3
Sp4g02570 Schrenkiella parvula HOM05D000888 ORTHO05D011624 6.6e-15 85.1 174 33.9
Thhalv10000515m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 1.1e-14 84.3 190 32.6
A08p18500 Brassica napus HOM05D000888 ORTHO05D000740 1.5e-14 84.0 217 30.0
BcaB01g02995 Brassica carinata HOM05D000888 ORTHO05D000740 2.5e-14 83.2 62 58.1
AT2G24645 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 5.6e-14 82.0 189 31.7
BraA07t29077Z Brassica rapa HOM05D000888 ORTHO05D000740 5.6e-14 82.0 190 31.6
Sp4g05520 Schrenkiella parvula HOM05D000888 ORTHO05D011624 2.1e-13 80.1 60 58.3
AL4G15320 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 1.1e-12 77.8 189 31.2
Carub.0001s2433 Capsella rubella HOM05D000888 ORTHO05D000740 1.1e-12 77.8 182 34.6
C03p20850 Brassica napus HOM05D000888 ORTHO05D000740 1.4e-12 77.4 186 31.2
Carub.0004s0418 Capsella rubella HOM05D000888 ORTHO05D000740 1.8e-12 77.0 208 30.3
C04p54280 Brassica napus HOM05D000888 ORTHO05D000740 2.3e-12 76.6 219 29.7
Thhalv10000111m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 4.0e-12 75.9 189 29.1
Thhalv10000130m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 5.2e-12 75.5 192 30.7
BolC4t26975H Brassica oleracea HOM05D000888 ORTHO05D000740 8.9e-12 74.7 218 29.4
CARHR116900 Cardamine hirsuta HOM05D000888 ORTHO05D000740 3.4e-11 72.8 189 29.1
AL4G15540 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 4.4e-11 72.4 188 28.7
A04p19010 Brassica napus HOM05D000888 ORTHO05D000740 4.4e-11 72.4 192 30.2
Sp4g03630 Schrenkiella parvula HOM05D000888 ORTHO05D000740 4.4e-11 72.4 188 28.2
BcaB06g27990 Brassica carinata HOM05D000888 ORTHO05D000740 5.8e-11 72.0 217 27.6
BraA03t15133Z Brassica rapa HOM05D000888 ORTHO05D000740 7.5e-11 71.6 190 30.5
BcaNung07344 Brassica carinata HOM05D000888 ORTHO05D000740 9.8e-11 71.2 188 29.3
CARHR117180 Cardamine hirsuta HOM05D000888 ORTHO05D000740 9.8e-11 71.2 161 30.4
BcaNung01507 Brassica carinata HOM05D000888 ORTHO05D000740 2.2e-10 70.1 190 29.5
C07p58840 Brassica napus HOM05D000888 ORTHO05D000740 2.2e-10 70.1 190 29.5
BraA04t17500Z Brassica rapa HOM05D000888 ORTHO05D000740 2.9e-10 69.7 224 27.2
Thhalv10027418m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 6.4e-10 68.6 177 26.0
AL3G33570 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 1.1e-09 67.8 168 28.6
A05p38200 Brassica napus HOM05D000888 ORTHO05D000740 1.1e-09 67.8 188 27.7
Thhalv10009500m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 1.4e-09 67.4 62 53.2
AL4G15420 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 1.9e-09 67.0 64 46.9
THA.LOC104819940 Tarenaya hassleriana HOM05D000888 ORTHO05D000740 2.4e-09 66.6 63 47.6
CARHR117140 Cardamine hirsuta HOM05D000888 ORTHO05D000740 5.4e-09 65.5 220 25.5
Aa31LG5G24100 Aethionema arabicum HOM05D000888 ORTHO05D000740 7.0e-09 65.1 183 29.0
AT4G00260 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 9.2e-09 64.7 200 28.5
BolC8t51483H Brassica oleracea HOM05D000888 ORTHO05D000740 1.2e-08 64.3 59 54.2
Aa31sc42G80 Aethionema arabicum HOM05D000888 ORTHO05D000740 1.6e-08 63.9 183 29.5
Sp4g03650 Schrenkiella parvula HOM05D000888 ORTHO05D000740 1.6e-08 63.9 138 37.0
Aa31sc73G40 Aethionema arabicum HOM05D000888 ORTHO05D000740 3.5e-08 62.8 146 31.5
BcaC05g29396 Brassica carinata HOM05D000888 ORTHO05D000740 3.5e-08 62.8 188 26.1
Thhalv10026818m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 4.6e-08 62.4 207 29.0
Aa31sc15G130 Aethionema arabicum HOM05D000888 ORTHO05D000740 7.8e-08 61.6 189 30.2
AT2G24700 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 7.8e-08 61.6 64 42.2
Sp7g29460 Schrenkiella parvula HOM05D000888 ORTHO05D000740 7.8e-08 61.6 175 26.9
Carub.0003s1035 Capsella rubella HOM05D000888 ORTHO05D000740 1.0e-07 61.2 187 26.7
CARHR239560 Cardamine hirsuta HOM05D000888 ORTHO05D000740 1.0e-07 61.2 188 23.4
Carub.0007s0893 Capsella rubella HOM05D000888 ORTHO05D000740 1.3e-07 60.8 86 39.5
Thhalv10027046m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 1.3e-07 60.8 183 26.8
AL3G22600 Arabidopsis lyrata HOM05D001505 ORTHO05D000740 1.7e-07 60.5 189 25.9
Aa31LG2G18650 Aethionema arabicum HOM05D000888 ORTHO05D000740 2.3e-07 60.1 191 27.7
BcaB06g26671 Brassica carinata HOM05D000888 ORTHO05D000740 2.3e-07 60.1 190 24.7
BcaC09g51947 Brassica carinata HOM05D000888 ORTHO05D000740 2.3e-07 60.1 85 38.8
Thhalv10028330m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 2.3e-07 60.1 218 27.5
Aa31LG2G18630 Aethionema arabicum HOM05D000888 ORTHO05D000740 3.0e-07 59.7 190 27.4
Carub.0004s0416 Capsella rubella HOM05D000888 ORTHO05D000740 3.0e-07 59.7 118 35.6
Sp7g29440 Schrenkiella parvula HOM05D000888 ORTHO05D000740 3.0e-07 59.7 125 33.6
Aa31LG9G5580 Aethionema arabicum HOM05D000888 ORTHO05D000740 3.9e-07 59.3 188 29.8
AL7G20320 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 3.9e-07 59.3 195 29.2
C03p87680 Brassica napus HOM05D000109 ORTHO05D000210 5.0e-07 58.9 60 50.0
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 5.0e-07 58.9 60 50.0
Thhalv10024893m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 5.0e-07 58.9 152 30.9
Sp3g09390 Schrenkiella parvula HOM05D000888 ORTHO05D000740 6.6e-07 58.5 163 27.6
Sp4g03680 Schrenkiella parvula HOM05D000888 ORTHO05D000740 6.6e-07 58.5 68 39.7
Aa31sc142G80 Aethionema arabicum HOM05D000888 ORTHO05D000740 1.1e-06 57.8 128 34.4
AL4G19670 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 1.5e-06 57.4 171 28.7
BcaNung01510 Brassica carinata HOM05D000888 ORTHO05D000740 1.5e-06 57.4 167 26.9
C01p07310 Brassica napus HOM05D000888 ORTHO05D000740 1.5e-06 57.4 85 37.6
C01p07350 Brassica napus HOM05D000888 ORTHO05D000740 1.5e-06 57.4 85 37.6
BolC1t00720H Brassica oleracea HOM05D000888 ORTHO05D000740 1.5e-06 57.4 85 37.6
BolC4t26974H Brassica oleracea HOM05D000888 ORTHO05D000740 1.5e-06 57.4 189 26.5
CARHR239530 Cardamine hirsuta HOM05D000888 ORTHO05D000740 1.5e-06 57.4 191 27.2
Aa31sc15G110 Aethionema arabicum HOM05D000888 ORTHO05D000740 1.9e-06 57.0 191 27.2
BolC4t26976H Brassica oleracea HOM05D000888 ORTHO05D000740 1.9e-06 57.0 188 25.0
BolC7t46329H Brassica oleracea HOM05D000109 ORTHO05D000210 1.9e-06 57.0 61 44.3
BraA03t15130Z Brassica rapa HOM05D000888 ORTHO05D000740 1.9e-06 57.0 167 25.7
BcaC09g51941 Brassica carinata HOM05D000888 ORTHO05D000740 2.5e-06 56.6 74 37.8
AL4G15670 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 3.3e-06 56.2 66 47.0
EL10Ac8g19103 Beta vulgaris HOM05D017700 ORTHO05D000088 3.3e-06 56.2 188 26.1
BcaB06g27992 Brassica carinata HOM05D000430 ORTHO05D000305 3.3e-06 56.2 60 41.7
BcaNung04123 Brassica carinata HOM05D000888 ORTHO05D026450 3.3e-06 56.2 67 46.3
A01p06650 Brassica napus HOM05D000888 ORTHO05D000740 3.3e-06 56.2 74 39.2
BcaB03g12709 Brassica carinata HOM05D000888 ORTHO05D000740 4.3e-06 55.8 158 25.9
BcaC07g40910 Brassica carinata HOM05D000888 ORTHO05D000740 4.3e-06 55.8 60 41.7
C01p07410 Brassica napus HOM05D000888 ORTHO05D000740 4.3e-06 55.8 61 44.3
C08p39100 Brassica napus HOM05D000888 ORTHO05D000740 4.3e-06 55.8 60 41.7
BolC8t51482H Brassica oleracea HOM05D000888 ORTHO05D000740 4.3e-06 55.8 60 41.7
AL7G20390 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 5.6e-06 55.5 61 45.9
BraA04t17499Z Brassica rapa HOM05D000888 ORTHO05D000740 5.6e-06 55.5 190 26.8
BolC5t34365H Brassica oleracea HOM05D000888 ORTHO05D000740 7.3e-06 55.1 163 25.8
BraA08t33816Z Brassica rapa HOM05D000888 ORTHO05D000740 7.3e-06 55.1 140 27.1
BcaC09g51951 Brassica carinata HOM05D000888 ORTHO05D000740 9.5e-06 54.7 188 23.9
A04p18990 Brassica napus HOM05D000888 ORTHO05D000740 9.5e-06 54.7 187 26.7
C01p07280 Brassica napus HOM05D000888 ORTHO05D000740 9.5e-06 54.7 188 24.5
BolC1t00717H Brassica oleracea HOM05D000888 ORTHO05D000740 9.5e-06 54.7 188 24.5


User provided reference genes

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