Gene: C08p39150
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C08p39150
- Transcript Identifier C08p39150
- Gene Type Coding gene
- Location C08 : 33921098-33927480 : negative
Gene Family Information
- ID HOM05D000888
- #Genes/#Species 675/49
- Phylogenetic origin
- ID ORTHO05D002878
- #Genes/#Species 256/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid C08p39150.1_BnaDAR
- v5 BnaC08g33900D
- single_cell_id C08p39150.1-BnaDAR
- ensembl GSBRNA2T00127304001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | ISO | PLAZA Tree-based Orthology | response to cold | AT4G31690 |
| GO:0009908 | ISO | PLAZA Tree-based Orthology | flower development | AT4G31610 |
| GO:0009793 | ISO | PLAZA Tree-based Orthology | embryo development ending in seed dormancy | AT4G00260 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Tree-based Orthology | protein binding | AT2G24700 |
| GO:0000976 | ISO | PLAZA Tree-based Orthology | transcription cis-regulatory region binding | AT4G31690 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Tree-based Orthology | nucleus | AT4G31610 |
| GO:0009507 | ISO | PLAZA Tree-based Orthology | chloroplast | AT1G26680 |
| GO:0009941 | ISO | PLAZA Tree-based Orthology | chloroplast envelope | AT4G31690 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039218 | REM family |
| IPR001878 | Zinc finger, CCHC-type |
| IPR000504 | RNA recognition motif domain |
| IPR015300 | DNA-binding pseudobarrel domain superfamily |
| IPR003340 | B3 DNA binding domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR036875 | Zinc finger, CCHC-type superfamily |
| IPR035979 | RNA-binding domain superfamily |