Gene: AT2G24650
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G24650
- Transcript Identifier AT2G24650.2
- Gene Type Coding gene
- Location Chr2 : 10483490-10487571 : negative
Gene Family Information
- ID HOM05D000888
- #Genes/#Species 675/49
- Phylogenetic origin
- ID ORTHO05D000740
- #Genes/#Species 640/49
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G24650.2
- uniprot P0CAP5
Descriptions
- Description B3 domain-containing protein REM13
- Computational description DNA binding;DNA binding;sequence-specific DNA binding transcription factors; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: transcriptional factor B3 family protein (TAIR:AT2G24680.1); Has 1264 Blast hits to 283 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1262; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | ISO | PLAZA Tree-based Orthology | response to cold | AT4G31690 |
| GO:0009908 | ISO | PLAZA Tree-based Orthology | flower development | AT4G31610 |
| GO:0009793 | ISO | PLAZA Tree-based Orthology | embryo development ending in seed dormancy | AT4G00260 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Tree-based Orthology | protein binding | AT2G24700 |
| GO:0000976 | ISO | PLAZA Tree-based Orthology | transcription cis-regulatory region binding | AT4G31690 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0009941 | ISO | PLAZA Tree-based Orthology | chloroplast envelope | AT4G31690 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.5.2 | RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (REM) |