Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR128180 Cardamine hirsuta HOM05D000538 ORTHO05D000614 2.9e-123 445.3 231 100.0
Aa31sc52G190 Aethionema arabicum HOM05D000538 ORTHO05D000614 4.3e-34 149.1 238 39.9
Sp7g23230 Schrenkiella parvula HOM05D000538 ORTHO05D000614 2.8e-33 146.4 237 40.5
Carub.0007s1582 Capsella rubella HOM05D000538 ORTHO05D000614 3.6e-33 146.0 253 36.4
CARHR232610 Cardamine hirsuta HOM05D000538 ORTHO05D000614 1.1e-32 144.4 251 37.5
Thhalv10028215m.g Eutrema salsugineum HOM05D000538 ORTHO05D000614 2.4e-32 143.3 237 37.6
AL7G27940 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 3.1e-32 142.9 222 38.3
C01p20690 Brassica napus HOM05D000538 ORTHO05D000614 2.0e-31 140.2 241 36.9
A01p16480 Brassica napus HOM05D000538 ORTHO05D000614 4.5e-31 139.0 234 36.8
BraA01t01602Z Brassica rapa HOM05D000538 ORTHO05D000614 4.5e-31 139.0 234 36.8
BcaC06g32829 Brassica carinata HOM05D000538 ORTHO05D000614 5.8e-31 138.7 240 39.6
BcaC09g50797 Brassica carinata HOM05D000538 ORTHO05D000614 5.8e-31 138.7 241 36.5
BolC1t01995H Brassica oleracea HOM05D000538 ORTHO05D000614 5.8e-31 138.7 241 36.5
AT4G25210 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 1.3e-30 137.5 253 36.0
BcaNung06352 Brassica carinata HOM05D000538 ORTHO05D000614 2.9e-30 136.3 235 37.4
Thhalv10005559m.g Eutrema salsugineum HOM05D000538 ORTHO05D000614 6.4e-30 135.2 225 36.9
Sp7g05730 Schrenkiella parvula HOM05D000538 ORTHO05D000614 1.1e-29 134.4 186 44.1
C07p54100 Brassica napus HOM05D000538 ORTHO05D000614 9.3e-29 131.3 234 35.9
A03p55820 Brassica napus HOM05D000538 ORTHO05D000614 1.2e-28 131.0 242 36.4
BraA03t14650Z Brassica rapa HOM05D000538 ORTHO05D000614 1.2e-28 131.0 242 36.4
BcaC06g32831 Brassica carinata HOM05D000538 ORTHO05D000614 2.1e-28 130.2 210 37.6
BolC7t45896H Brassica oleracea HOM05D000538 ORTHO05D000614 3.5e-28 129.4 210 37.6
THA.LOC104805805 Tarenaya hassleriana HOM05D000538 ORTHO05D000614 1.0e-27 127.9 254 35.8
Thhalv10027016m.g Eutrema salsugineum HOM05D000538 ORTHO05D000614 3.9e-27 125.9 240 35.8
Carub.0004s0072 Capsella rubella HOM05D000538 ORTHO05D000614 1.9e-26 123.6 226 38.5
AT4G01260 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 4.0e-24 115.9 229 35.8
THA.LOC104805998 Tarenaya hassleriana HOM05D000538 ORTHO05D000614 2.6e-23 113.2 255 32.2
THA.LOC104822871 Tarenaya hassleriana HOM05D000538 ORTHO05D000614 7.6e-23 111.7 205 33.7
AL3G53450 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 4.9e-22 109.0 228 33.8
Duzib213G0460 Durio zibethinus HOM05D000538 ORTHO05D000614 2.5e-18 96.7 235 30.6
Thecc.07G148000 Theobroma cacao HOM05D000538 ORTHO05D000614 3.3e-18 96.3 242 31.0
Gohir.A13G018100 Gossypium hirsutum HOM05D000538 ORTHO05D000614 7.4e-18 95.1 236 32.2
BcaC02g08887 Brassica carinata HOM05D000538 ORTHO05D000614 9.6e-18 94.7 233 30.9
C04p49440 Brassica napus HOM05D000538 ORTHO05D000614 4.8e-17 92.4 233 30.5
Duzib213G0266 Durio zibethinus HOM05D000538 ORTHO05D000614 4.8e-17 92.4 235 31.5
Aa31LG5G24170 Aethionema arabicum HOM05D000538 ORTHO05D000614 1.4e-16 90.9 205 31.7
Gorai.002G037800 Gossypium raimondii HOM05D000538 ORTHO05D000614 1.4e-16 90.9 235 31.5
Gohir.A01G040800 Gossypium hirsutum HOM05D000538 ORTHO05D000614 3.1e-16 89.7 235 31.5
BolC4t26529H Brassica oleracea HOM05D000538 ORTHO05D000614 4.0e-16 89.4 233 30.5
Sp7g04750 Schrenkiella parvula HOM05D000538 ORTHO05D000614 4.0e-16 89.4 237 32.5
A04p15220 Brassica napus HOM05D000538 ORTHO05D000614 6.9e-16 88.6 238 29.8
Sabra11G0087800 Salix brachista HOM05D000538 ORTHO05D000614 6.9e-16 88.6 229 28.8
Gohir.D10G203100 Gossypium hirsutum HOM05D000538 ORTHO05D000614 9.0e-16 88.2 237 31.2
Gorai.011G228000 Gossypium raimondii HOM05D000538 ORTHO05D000614 9.0e-16 88.2 237 31.2
Gohir.A10G196200 Gossypium hirsutum HOM05D000538 ORTHO05D000614 1.2e-15 87.8 217 30.9
COL.COLO4_17402 Corchorus olitorius HOM05D000538 ORTHO05D000614 1.5e-15 87.4 245 28.6
Potri.009G088400 Populus trichocarpa HOM05D000538 ORTHO05D000614 2.0e-15 87.0 247 27.1
Gorai.013G021200 Gossypium raimondii HOM05D000538 ORTHO05D000614 2.6e-15 86.7 239 30.5
BraA04t17162Z Brassica rapa HOM05D000538 ORTHO05D000614 3.4e-15 86.3 238 29.8
Gohir.D01G028300 Gossypium hirsutum HOM05D000538 ORTHO05D000614 7.6e-15 85.1 221 30.8
Sabra11G0087400 Salix brachista HOM05D000538 ORTHO05D000614 1.7e-14 84.0 230 27.4
Duzib268G1429 Durio zibethinus HOM05D000538 ORTHO05D000614 3.8e-14 82.8 237 30.0
Gohir.D13G019101 Gossypium hirsutum HOM05D000538 ORTHO05D000614 3.8e-14 82.8 246 28.5
Manes.16G016900 Manihot esculenta HOM05D000538 ORTHO05D000614 6.5e-14 82.0 251 27.5
Manes.17G030100 Manihot esculenta HOM05D000538 ORTHO05D000614 8.4e-14 81.6 256 29.7
BcaB06g27693 Brassica carinata HOM05D000538 ORTHO05D000614 1.9e-13 80.5 234 26.9
Potri.001G293900 Populus trichocarpa HOM05D000538 ORTHO05D000614 1.9e-13 80.5 231 26.4
Sabra16G0183500 Salix brachista HOM05D000538 ORTHO05D000614 1.9e-13 80.5 247 26.7
Ciclev10015528m.g Citrus clementina HOM05D000538 ORTHO05D000614 3.2e-13 79.7 250 25.2
AL3G53940 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 7.1e-13 78.6 240 30.4
CsaV3_7G003860 Cucumis sativus L. HOM05D000538 ORTHO05D000614 1.2e-12 77.8 237 31.6
CARHR011790 Cardamine hirsuta HOM05D000538 ORTHO05D000614 1.6e-12 77.4 239 29.3
Manes.07G017600 Manihot esculenta HOM05D000538 ORTHO05D000614 1.6e-12 77.4 252 26.2
Sp1g10140 Schrenkiella parvula HOM05D000538 ORTHO05D000614 2.7e-12 76.6 229 27.1
AT4G00130 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 3.5e-12 76.3 162 34.6
Lalb_Chr16g0392201 Lupinus albus HOM05D000538 ORTHO05D000614 1.0e-11 74.7 257 28.0
MELO3C027126.2 Cucumis melo HOM05D000538 ORTHO05D000614 1.8e-11 73.9 254 27.2
Hma1.2p1_0613F.1_g189370 Hydrangea macrophylla HOM05D000538 ORTHO05D000614 1.8e-11 73.9 137 34.3
Atru.chr1.3753 Acer truncatum HOM05D000538 ORTHO05D000614 2.3e-11 73.6 230 25.2
CiPaw.09G080200 Carya illinoinensis HOM05D000538 ORTHO05D000614 3.0e-11 73.2 249 26.5
TAR627G0243 Trochodendron aralioides HOM05D000538 ORTHO05D000614 3.0e-11 73.2 223 28.3
Cpa.g.sc1622.1 Carica papaya HOM05D000538 ORTHO05D000614 3.9e-11 72.8 243 26.3
Sed0011252 Sechium edule HOM05D000538 ORTHO05D000614 5.1e-11 72.4 266 24.8
Glyma.05G088300 Glycine max HOM05D000538 ORTHO05D000614 8.7e-11 71.6 221 27.6
Lalb_Chr05g0228411 Lupinus albus HOM05D000538 ORTHO05D000614 8.7e-11 71.6 149 33.6
RcHm_v2.0_Chr2g0160351 Rosa chinensis HOM05D000538 ORTHO05D000614 1.1e-10 71.2 236 27.1
Carub.0002s0334 Capsella rubella HOM05D000538 ORTHO05D000614 2.5e-10 70.1 234 24.4
BcaC07g37349 Brassica carinata HOM05D000538 ORTHO05D000614 3.3e-10 69.7 230 25.2
MELO3C018793.2 Cucumis melo HOM05D000538 ORTHO05D000614 4.3e-10 69.3 250 25.6
Gohir.D05G225950 Gossypium hirsutum HOM05D000538 ORTHO05D000614 4.3e-10 69.3 201 27.9
Lj2C275T5 Lonicera japonica HOM05D000538 ORTHO05D000614 4.3e-10 69.3 251 24.3
A01p30590 Brassica napus HOM05D000538 ORTHO05D000614 5.7e-10 68.9 237 26.6
BraA01t03191Z Brassica rapa HOM05D000538 ORTHO05D000614 5.7e-10 68.9 237 26.6
Haze_06686 Corylus avellana HOM05D000538 ORTHO05D000614 5.7e-10 68.9 251 26.7
CsaV3_6G049420 Cucumis sativus L. HOM05D000538 ORTHO05D000614 5.7e-10 68.9 254 26.4
Gorai.009G233500 Gossypium raimondii HOM05D000538 ORTHO05D000614 5.7e-10 68.9 201 27.9
TWI39G0036 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 7.4e-10 68.6 237 25.3
Actinidia24277 Actinidia chinensis HOM05D000538 ORTHO05D000614 1.3e-09 67.8 170 28.8
BcaC06g31859 Brassica carinata HOM05D000538 ORTHO05D000614 1.3e-09 67.8 248 25.8
Cfa016408 Carpinus fangiana HOM05D000538 ORTHO05D000614 1.3e-09 67.8 264 25.4
vmacro12238 Vaccinium macrocarpon HOM05D000538 ORTHO05D000614 1.3e-09 67.8 173 29.5
Carub.0003s3541 Capsella rubella HOM05D000538 ORTHO05D000614 2.2e-09 67.0 237 28.3
Rhsim13G0162300 Rhododendron simsii HOM05D000538 ORTHO05D000614 2.2e-09 67.0 248 27.0
THA.LOC104809520 Tarenaya hassleriana HOM05D000538 ORTHO05D000614 2.2e-09 67.0 251 26.7
ClCG02G001630 Citrullus lanatus HOM05D000538 ORTHO05D000614 2.8e-09 66.6 150 31.3
Thhalv10023503m.g Eutrema salsugineum HOM05D000538 ORTHO05D000614 2.8e-09 66.6 263 24.3
TWI38G2228 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 2.8e-09 66.6 254 24.8
ClCG01G022290 Citrullus lanatus HOM05D000538 ORTHO05D000614 6.3e-09 65.5 121 32.2
Peaxi162Scf00030g00224 Petunia axillaris HOM05D000538 ORTHO05D000614 6.3e-09 65.5 243 23.5
BcaNung07112 Brassica carinata HOM05D000538 ORTHO05D000614 8.2e-09 65.1 269 24.9
C08p07930 Brassica napus HOM05D000538 ORTHO05D000614 8.2e-09 65.1 246 23.6
BolC8t47645H Brassica oleracea HOM05D000538 ORTHO05D000614 8.2e-09 65.1 246 23.6
TWI38G2394 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 8.2e-09 65.1 257 24.9
Ciclev10011975m.g Citrus clementina HOM05D000538 ORTHO05D000614 1.1e-08 64.7 239 25.1
Dinv18944 Davidia involucrata HOM05D000538 ORTHO05D000614 1.1e-08 64.7 239 23.0
Psat1g211120 Pisum sativum HOM05D000538 ORTHO05D000614 1.1e-08 64.7 212 25.0
HanXRQChr15g0482761 Helianthus annuus HOM05D000538 ORTHO05D000614 1.4e-08 64.3 232 22.4
Nn4g26474 Nelumbo nucifera HOM05D000538 ORTHO05D000614 1.4e-08 64.3 125 30.4
TWI38G1831 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 1.4e-08 64.3 257 24.9
SGA_v2.0_scaffold62G21349 Striga asiatica HOM05D000538 ORTHO05D000614 1.8e-08 63.9 183 26.8
Duzib248G0414 Durio zibethinus HOM05D000538 ORTHO05D000614 2.4e-08 63.5 119 29.4
CANSAT54G1163 Cannabis sativa HOM05D000538 ORTHO05D000614 3.1e-08 63.2 245 25.7
AL3G48460 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 4.1e-08 62.8 234 27.4
Gohir.A05G223250 Gossypium hirsutum HOM05D000538 ORTHO05D000614 4.1e-08 62.8 194 28.4
Sed0002193 Sechium edule HOM05D000538 ORTHO05D000614 4.1e-08 62.8 136 31.6
AT1G61730 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 5.3e-08 62.4 252 26.2
AT5G23180 Arabidopsis thaliana HOM05D000538 ORTHO05D021395 6.9e-08 62.0 76 42.1
A09p16670 Brassica napus HOM05D000538 ORTHO05D000614 6.9e-08 62.0 260 25.0
BraA09t37306Z Brassica rapa HOM05D000538 ORTHO05D000614 6.9e-08 62.0 260 25.0
Actinidia05541 Actinidia chinensis HOM05D000538 ORTHO05D000614 9.0e-08 61.6 169 27.8
AL1G22620 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 9.0e-08 61.6 221 25.8
MELO3C007351.2 Cucumis melo HOM05D000538 ORTHO05D000614 9.0e-08 61.6 222 26.1
Lj8P121T27 Lonicera japonica HOM05D000538 ORTHO05D000614 9.0e-08 61.6 258 22.1
FvH4_3g02930 Fragaria vesca HOM05D000538 ORTHO05D000614 1.2e-07 61.2 225 24.9
Nn1g03728 Nelumbo nucifera HOM05D000538 ORTHO05D000614 1.2e-07 61.2 173 28.3
Rhsim11G0019400 Rhododendron simsii HOM05D000538 ORTHO05D000614 1.5e-07 60.8 206 25.7
Lj6g0024738 Lotus japonicus HOM05D000538 ORTHO05D000614 2.0e-07 60.5 132 33.3
TAR629G2738 Trochodendron aralioides HOM05D000538 ORTHO05D000614 2.0e-07 60.5 150 29.3
Actinidia26954 Actinidia chinensis HOM05D000538 ORTHO05D000614 2.6e-07 60.1 166 27.1
BcaC04g22347 Brassica carinata HOM05D000538 ORTHO05D000614 3.4e-07 59.7 260 24.6
C09p20300 Brassica napus HOM05D000538 ORTHO05D000614 3.4e-07 59.7 260 24.6
BolC9t54934H Brassica oleracea HOM05D000538 ORTHO05D000614 3.4e-07 59.7 260 24.6
QL05p077181 Quercus lobata HOM05D000538 ORTHO05D000614 3.4e-07 59.7 246 23.2
FAN21G0633 Fragaria x ananassa HOM05D000538 ORTHO05D000614 4.5e-07 59.3 236 24.2
FAN21G1131 Fragaria x ananassa HOM05D000538 ORTHO05D000614 4.5e-07 59.3 236 24.2
Prupe.3G046700 Prunus persica HOM05D002395 ORTHO05D000614 4.5e-07 59.3 248 23.4
Sed0007057 Sechium edule HOM05D000538 ORTHO05D000614 5.9e-07 58.9 123 28.5
AL2G14390 Arabidopsis lyrata HOM05D000538 ORTHO05D000614 7.7e-07 58.5 260 23.8
BcaB07g31281 Brassica carinata HOM05D000538 ORTHO05D000614 7.7e-07 58.5 259 24.3
QL93p0073_1288 Quercus lobata HOM05D000538 ORTHO05D000614 7.7e-07 58.5 266 23.3
PGSC0003DMG400030831 Solanum tuberosum HOM05D000538 ORTHO05D000614 7.7e-07 58.5 237 22.8
SGA_v2.0_scaffold12G06174 Striga asiatica HOM05D000538 ORTHO05D000614 7.7e-07 58.5 133 29.3
MD05G1335900 Malus domestica HOM05D000538 ORTHO05D000614 1.0e-06 58.2 113 28.3
Nn1g03725 Nelumbo nucifera HOM05D000538 ORTHO05D000614 1.0e-06 58.2 125 28.0
Sp2g02820 Schrenkiella parvula HOM05D000538 ORTHO05D000614 1.0e-06 58.2 263 22.4
SGA_v2.0_scaffold52G19083 Striga asiatica HOM05D000538 ORTHO05D000614 1.0e-06 58.2 132 32.6
BcaC02g10543 Brassica carinata HOM05D000538 ORTHO05D000614 1.3e-06 57.8 257 24.9
A06p08130 Brassica napus HOM05D000538 ORTHO05D000614 1.3e-06 57.8 143 32.9
C04p27660 Brassica napus HOM05D000538 ORTHO05D000614 1.3e-06 57.8 257 24.9
BolC4t24311H Brassica oleracea HOM05D000538 ORTHO05D000614 1.3e-06 57.8 257 24.9
FAN09G4736 Fragaria x ananassa HOM05D000538 ORTHO05D000614 1.3e-06 57.8 231 25.1
Oeu018923.1 Olea europaea HOM05D016698 ORTHO05D019323 1.3e-06 57.8 140 30.0
SGA_v2.0_scaffold52G19087 Striga asiatica HOM05D000538 ORTHO05D000614 1.3e-06 57.8 110 33.6
SGA_v2.0_scaffold52G19112 Striga asiatica HOM05D000538 ORTHO05D000614 1.3e-06 57.8 121 30.6
VMungo0540G1345 Vigna mungo HOM05D000538 ORTHO05D000614 1.3e-06 57.8 137 31.4
SGA_v2.0_scaffold52G19049 Striga asiatica HOM05D000538 ORTHO05D000614 1.7e-06 57.4 145 33.1
AT4G00390 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 2.2e-06 57.0 243 23.9
Lsat_1_v5_gn_1_81901 Lactuca sativa HOM05D000538 ORTHO05D000614 2.2e-06 57.0 221 22.2
Lj1g0015191 Lotus japonicus HOM05D000538 ORTHO05D000614 2.2e-06 57.0 97 36.1
Medtr7g114600 Medicago truncatula HOM05D000538 ORTHO05D000614 2.2e-06 57.0 129 31.8
Oeu058171.1 Olea europaea HOM05D000538 ORTHO05D000614 2.2e-06 57.0 147 24.5
BraA06t24012Z Brassica rapa HOM05D000538 ORTHO05D000614 2.9e-06 56.6 143 32.9
Duzib052G0757 Durio zibethinus HOM05D000538 ORTHO05D000614 2.9e-06 56.6 142 27.5
GSVIVG01002745001 Vitis vinifera HOM05D000538 ORTHO05D000614 2.9e-06 56.6 184 26.6
CARHR112660 Cardamine hirsuta HOM05D000538 ORTHO05D021395 3.8e-06 56.2 74 39.2
Sopen04g029590 Solanum pennellii HOM05D000538 ORTHO05D000614 5.0e-06 55.8 225 24.0
Ca_00207_v3 Cicer arietinum L. HOM05D000538 ORTHO05D000614 6.5e-06 55.5 248 26.6
Lsat_1_v5_gn_3_43101 Lactuca sativa HOM05D000538 ORTHO05D000614 6.5e-06 55.5 137 27.0
MBI02_g02477_MAGBIO Magnolia biondii HOM05D000538 ORTHO05D000614 6.5e-06 55.5 257 23.0
Nitab4.5_0008264g0010 Nicotiana tabacum HOM05D000538 ORTHO05D000614 6.5e-06 55.5 158 25.9
QL08p034081 Quercus lobata HOM05D000538 ORTHO05D000614 6.5e-06 55.5 109 27.5
Cc02_g31480 Coffea canephora HOM05D000538 ORTHO05D000614 8.5e-06 55.1 130 33.1
Migut.M01263 Erythranthe guttata HOM05D000538 ORTHO05D000614 8.5e-06 55.1 111 27.9
FAN02G3464 Fragaria x ananassa HOM05D000538 ORTHO05D000614 8.5e-06 55.1 233 24.0
SGA_v2.0_scaffold62G21345 Striga asiatica HOM05D000538 ORTHO05D000614 8.5e-06 55.1 121 28.9
SGA_v2.0_scaffold62G21365 Striga asiatica HOM05D000538 ORTHO05D000614 8.5e-06 55.1 243 27.2
TAR365G0257 Trochodendron aralioides HOM05D000538 ORTHO05D000614 8.5e-06 55.1 129 33.3
unitig_578.g16302 Utricularia gibba HOM05D000538 ORTHO05D000614 8.5e-06 55.1 125 32.0


User provided reference genes

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