Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR085910 Cardamine hirsuta HOM05D001260 ORTHO05D116499 7.6e-29 129.8 65 100.0
AT5G05980 Arabidopsis thaliana HOM05D001260 ORTHO05D002424 1.0e-09 66.2 44 70.5
Carub.0006s0487 Capsella rubella HOM05D001260 ORTHO05D002424 1.8e-09 65.5 56 57.1
CARHR207230 Cardamine hirsuta HOM05D001260 ORTHO05D002424 1.8e-09 65.5 44 70.5
Aa31LG11G7020 Aethionema arabicum HOM05D001260 ORTHO05D002424 3.9e-09 64.3 44 68.2
BcaB05g21687 Brassica carinata HOM05D001260 ORTHO05D002424 3.9e-09 64.3 44 70.5
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 3.9e-09 64.3 44 70.5
BolC2t06221H Brassica oleracea HOM05D001260 ORTHO05D002424 3.9e-09 64.3 44 70.5
AL6G15920 Arabidopsis lyrata HOM05D001260 ORTHO05D002424 5.1e-09 63.9 44 68.2
BcaB01g05967 Brassica carinata HOM05D001260 ORTHO05D002424 6.7e-09 63.5 55 56.4
C03p02830 Brassica napus HOM05D001260 ORTHO05D002424 6.7e-09 63.5 55 56.4
Sp6g36910 Schrenkiella parvula HOM05D001260 ORTHO05D002424 6.7e-09 63.5 46 67.4
BraA03t09610Z Brassica rapa HOM05D001260 ORTHO05D002424 8.7e-09 63.2 55 56.4
BcaB01g05749 Brassica carinata HOM05D001260 ORTHO05D002424 1.1e-08 62.8 43 69.8
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 1.5e-08 62.4 44 68.2
BolC3t12838H Brassica oleracea HOM05D001260 ORTHO05D002424 2.5e-08 61.6 39 71.8
Thhalv10013069m.g Eutrema salsugineum HOM05D001260 ORTHO05D002424 4.3e-08 60.8 44 65.9
BcaNung06229 Brassica carinata HOM05D001260 ORTHO05D002424 9.7e-08 59.7 44 61.4
Cpa.g.sc776.1 Carica papaya HOM05D001260 ORTHO05D002424 9.7e-08 59.7 44 56.8
BraA10t45076Z Brassica rapa HOM05D001260 ORTHO05D002424 2.2e-07 58.5 42 61.9
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 2.8e-07 58.2 44 59.1
A03p02490 Brassica napus HOM05D001260 ORTHO05D002424 3.7e-07 57.8 42 64.3
QL08p061736 Quercus lobata HOM05D001260 ORTHO05D002424 8.2e-07 56.6 42 61.9
BcaC06g32308 Brassica carinata HOM05D001260 ORTHO05D002424 1.4e-06 55.8 42 59.5
BcaC06g32312 Brassica carinata HOM05D001260 ORTHO05D002424 1.4e-06 55.8 42 59.5
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 1.4e-06 55.8 42 59.5
BolC9t59840H Brassica oleracea HOM05D001260 ORTHO05D002424 1.4e-06 55.8 42 59.5
Dinv34467 Davidia involucrata HOM05D001260 ORTHO05D002424 1.8e-06 55.5 46 58.7
Eucgr.J02122 Eucalyptus grandis HOM05D001260 ORTHO05D002424 2.4e-06 55.1 55 50.9
vmacro07029 Vaccinium macrocarpon HOM05D001260 ORTHO05D002424 2.4e-06 55.1 43 55.8
COL.COLO4_25528 Corchorus olitorius HOM05D001260 ORTHO05D002424 3.1e-06 54.7 42 64.3
Hma1.2p1_0039F.1_g024730 Hydrangea macrophylla HOM05D001260 ORTHO05D002424 3.1e-06 54.7 45 55.6
Sabra10G0152300 Salix brachista HOM05D001260 ORTHO05D002424 3.1e-06 54.7 56 50.0
Manes.10G023400 Manihot esculenta HOM05D001260 ORTHO05D002424 5.3e-06 53.9 45 57.8
Potri.008G060600 Populus trichocarpa HOM05D001260 ORTHO05D002424 9.0e-06 53.1 59 45.8
Potri.010G197800 Populus trichocarpa HOM05D001260 ORTHO05D002424 9.0e-06 53.1 48 54.2
QL08p061707 Quercus lobata HOM05D001260 ORTHO05D002424 9.0e-06 53.1 45 57.8
TWI38G0361 Tripterygium wilfordii HOM05D001260 ORTHO05D002424 9.0e-06 53.1 37 64.9


User provided reference genes

Program Settings