Gene: AT5G05980
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G05980
- Transcript Identifier AT5G05980.1
- Gene Type Coding gene
- Location Chr5 : 1799738-1804441 : negative
Gene Family Information
- ID HOM05D001260
- #Genes/#Species 496/100
- Phylogenetic origin
- ID ORTHO05D002424
- #Genes/#Species 289/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G05980.1
- symbol DFB
- Alias ATDFB,DHFS-FPGS homolog B,FPGS1,folylpolyglutamate synthetase 1
- uniprot F4K2A1
Descriptions
- Description DHFS-FPGS homolog B
- Computational description DHFS-FPGS homolog B (DFB); CONTAINS InterPro DOMAIN/s: Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, central (InterPro:IPR013221), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog D (TAIR:AT3G55630.3); Has 7626 Blast hits to 7624 proteins in 2505 species: Archae - 43; Bacteria - 4775; Metazoa - 165; Fungi - 350; Plants - 132; Viruses - 0; Other Eukaryotes - 2161 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006730 | IEA | GOA Database | one-carbon metabolic process | |
GO:0006730 | TAS | Gene Ontology | one-carbon metabolic process | 1 |
GO:0009396 | IEA | GOA Database | folic acid-containing compound biosynthetic process | |
GO:0009396 | IBA | Gene Ontology | folic acid-containing compound biosynthetic process | 2 |
GO:0009396 | IEA | InterPro | folic acid-containing compound biosynthetic process | |
GO:0009058 | IEA | GOA Database | biosynthetic process | |
GO:0009058 | IEA | InterPro | biosynthetic process | |
GO:0046901 | IMP IBA IEA | Gene Ontology | tetrahydrofolylpolyglutamate biosynthetic process | 2 3 |
GO:0009809 | IMP | Gene Ontology | lignin biosynthetic process | 4 |
GO:1904961 | IMP | Gene Ontology | quiescent center organization | 3 |
GO:0048767 | IMP | Gene Ontology | root hair elongation | 3 |
GO:0048364 | IMP | Gene Ontology | root development | 3 |
GO:0010449 | IMP | Gene Ontology | root meristem growth | 3 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0004326 | IEA | GOA Database | tetrahydrofolylpolyglutamate synthase activity | |
GO:0004326 | IMP, IGI IBA | Gene Ontology | tetrahydrofolylpolyglutamate synthase activity | 1 2 5 |
GO:0004326 | IEA | InterPro | tetrahydrofolylpolyglutamate synthase activity | |
GO:0046872 | IEA | GOA Database | metal ion binding | |
GO:0016874 | IEA | GOA Database | ligase activity | |
GO:0016874 | IEA | InterPro | ligase activity | |
GO:0000166 | IEA | GOA Database | nucleotide binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009507 | IEA | GOA Database | chloroplast | |
GO:0005829 | IDA | GOA Database | cytosol | |
GO:0005829 | IBA | Gene Ontology | cytosol | 2 |
GO:0009536 | IEA | GOA Database | plastid | |
GO:0005737 | IBA | Gene Ontology | cytoplasm | 2 |
GO:0005739 | IBA | Gene Ontology | mitochondrion | 2 |
GO:0009570 | IDA | Gene Ontology | chloroplast stroma | 1 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
7.5.6 | Coenzyme metabolism.tetrahydrofolate metabolism.folyl-polyglutamate synthetase |